Factsheet for Zm00001d041083_P005

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG23422	Sorghum	nucleus	91.74	90.41
TraesCS5D01G123800.1	Wheat	nucleus	79.5	78.34
TraesCS5B01G110300.1	Wheat	nucleus	79.06	77.91
TraesCS5A01G109500.1	Wheat	nucleus	78.47	77.33
GSMUA_Achr6P27610_001	Banana	cytosol	65.78	68.09
HORVU5Hr1G029910.10	Barley	cytosol, mitochondrion, nucleus	69.91	66.48
KRG94255	Soybean	nucleus	62.39	64.19
KRH57680	Soybean	nucleus	61.65	63.43
VIT_14s0068g02130.t01	Wine grape	nucleus	62.24	63.17
Bra032982.1-P	Field mustard	plastid	59.44	62.19
Os12t0443800-01	Rice	nucleus	34.96	62.04
CDY28494	Canola	plastid	59.14	61.88
CDY34176	Canola	plastid	59.0	61.73
AT3G27120.1	Thale cress	nucleus	58.55	58.38
PGSC0003DMT400052226	Potato	nucleus	56.49	57.34
Solyc02g094100.2.1	Tomato	nucleus	55.9	56.74
Zm00001d029385_P001	Maize	cytosol	11.95	42.41
Zm00001d049686_P001	Maize	plastid	12.83	36.4
Zm00001d045483_P002	Maize	cytosol	26.7	36.35
Zm00001d043410_P002	Maize	cytosol	20.8	33.98
Zm00001d039904_P006	Maize	cytosol	20.8	32.41
Zm00001d008596_P005	Maize	cytosol	20.8	30.99
Zm00001d011611_P005	Maize	cytosol	23.01	30.23
Zm00001d014775_P002	Maize	plastid	17.26	29.92
Zm00001d011563_P019	Maize	mitochondrion	21.98	28.38
Zm00001d036410_P002	Maize	plastid	17.4	24.79
Zm00001d009702_P001	Maize	endoplasmic reticulum	23.45	18.86
Zm00001d039315_P003	Maize	vacuole	23.16	18.67
Zm00001d008983_P001	Maize	vacuole	23.16	18.56
Zm00001d043841_P003	Maize	cytosol	22.86	17.15
Zm00001d007139_P007	Maize	cytosol, plastid	25.07	16.08
Zm00001d052248_P009	Maize	mitochondrion	22.57	15.5
Zm00001d047494_P007	Maize	cytosol	24.63	15.1
Zm00001d029120_P004	Maize	cytosol	25.07	15.1
Zm00001d048689_P004	Maize	plastid	25.81	13.96
Zm00001d007698_P002	Maize	plastid	25.81	13.82

Protein Annotations

Gene3D:1.10.8.60	MapMan:13.3.6.5.5.1	Gene3D:3.40.50.300	UniProt:A0A1D6MTY9	InterPro:AAA+_ATPase	InterPro:ATPase_AAA_CS
InterPro:ATPase_AAA_core	GO:GO:0000003	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006259	GO:GO:0007049	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016043
GO:GO:0016787	GO:GO:0045128	ProteinID:ONM32355.1	InterPro:P-loop_NTPase	PFAM:PF00004	PFAM:PF09336
ScanProsite:PS00674	PANTHER:PTHR23074	PANTHER:PTHR23074:SF17	SMART:SM00382	SUPFAM:SSF52540	UniParc:UPI000842DDFE
InterPro:Vps4_C	EnsemblPlantsGene:Zm00001d041083	EnsemblPlants:Zm00001d041083_P005	EnsemblPlants:Zm00001d041083_T005	SEG:seg	:

Description

P-loop containing nucleoside triphosphate hydrolases superfamily protein

Coordinates

chr3:-:96133444..96165345

Molecular Weight (calculated)

74938.8 Da

IEP (calculated)

7.629

GRAVY (calculated)

-0.524

Length

678 amino acids

Sequence
(BLAST)

001: MAEPPLAAGC TTNWRREADE RLRRLHSLLF GADAALEHGD ATVAQALALR LLGFLDSQAL AAGAGPEDAA FVAPIRTAAS ARLAAASRAR ASDSDRAAFE
101: LARTDVGCVF ANQGDNNVER IQRSKYFQAL LQKSKANVSE QRNATCQEFS VQWAPCVDES QAEMENEKLS IRASKLMMQT KLTSLYSSKS LKTNGVPNKN
201: MFKSENSSKV CAGVENRTSQ NSNRRHAYLD VEEDEKSHGQ LQNAKWKHTG FRSPIFEVAN SPSSNDEADA PANEFTTAKR MMGLDVVQKP AQNGPQGASV
301: SPQCDNNYST RNYGVRPSWN SRRGPRGSFI PPIRNNGGSG TTISRVTGKN DESMEDSTRK CIEMLCAPDG ELPEKLRNLE PRLIEHVSNE IMDRDPNVRW
401: NDIAGLEHAK KCVTEMVIWP LLRPDIFRGC RSPGRGLLLF GPPGTGKTMI GKAIAGEAKA TFFYISASSL TSKWIGEGEK LVRALFGVAS CRQPAVIFVD
501: EIDSLLSQRK SDGEHESSRR LKTQFLIEME GFDTGNEQIL LIGATNRPQE LDEAARRRLT KRLYIPLPSL EARAWIIRNL LEKDGLFMLS EEETSAICKL
601: TEGYSGSDMK NLVKDASMGP LREALQTGVE IAKLSKEDMR PVMLKDFENA MREVRPSVSS SELGTYEEWN RQFGSLSI

Best Arabidopsis Sequence Match ( AT3G27120.1 )
(BLAST)

001: MCGSVVSDSE REFEFHFWGF GHLGKEEERI MAGKRSSPFS SPLLRPPPEF LNVKEEGETE TPCWRKEVDE NLKRLQSLLF GADKFLEKSD FSSAQILGLR
101: LLGFLDSRSV TDADRDFIGP IRREVASKID LALEGLVSDS DRKAFELANT APGAIFGSKG GFDVEKIKQS KYFGFHVSQS NGKGVKEMEE RHDTDKLIPK
201: APKSMMQAKL TSLYGNSIGK PDNQRKTSVN NQDRASDECV IVERSHGFGF GTKRPHAETS SLANDGEVKE DGAPNGFVSA KIKLEMDVRQ KRGSTESPSS
301: CLSPQSDKNA LGRGYGSRSG GLRRGYRSNF VPPVKTNGNN VGNLTSRIGG KTDDALDDST RTCLEMLCGP DGELPEKLRN LEPRLIEHVS NEIMDRDPNV
401: RWDDIAGLEH AKKCVTEMVI WPLLRPDIFK GCRSPGKGLL LFGPPGTGKT MIGKAIAGEA KATFFYISAS SLTSKWIGEG EKLVRALFGV ASCRQPAVIF
501: VDEIDSLLSQ RKSDGEHESS RRLKTQFLIE MEGFDSGSEQ ILLIGATNRP QELDEAARRR LTKRLYIPLP SSEARAWIIQ NLLKKDGLFT LSDDDMNIIC
601: NLTEGYSGSD MKNLVKDATM GPLREALKRG IDITNLTKDD MRLVTLQDFK DALQEVRPSV SQNELGIYEN WNNQFGSLSL

Arabidopsis Description

FIGL1ATPase family AAA domain-containing protein FIGL1 [Source:UniProtKB/Swiss-Prot;Acc:F4JEX5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.