Factsheet for Zm00001d045483_P002

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 1
plastid 1
extracellular 2
golgi 2
plasma membrane 2
endoplasmic reticulum 2
vacuole 2
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid, secretory
iPSORT:	mitochondrion
MultiLoc:	plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER87773	Sorghum	cytosol	94.38	95.92
TraesCS7D01G060200.1	Wheat	cytosol	84.74	88.47
TraesCS4A01G422400.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	85.14	88.33
Os06t0130000-02	Rice	cytosol	86.35	88.3
TraesCS7A01G065800.1	Wheat	cytosol	84.94	88.12
HORVU7Hr1G013190.8	Barley	plastid	84.74	75.49
CDY18925	Canola	plastid	52.21	71.82
Bra004917.1-P	Field mustard	cytosol	45.38	70.85
KRH40573	Soybean	cytosol, plastid	66.27	67.9
CDX74745	Canola	cytosol	64.66	67.79
VIT_15s0048g01720.t01	Wine grape	cytosol	66.47	67.41
GSMUA_Achr10P...	Banana	cytosol	70.08	67.12
KRH00594	Soybean	cytosol, plastid	66.06	67.01
AT2G45500.5	Thale cress	cytosol	65.86	66.0
Bra039332.1-P	Field mustard	cytosol	57.83	65.9
CDY37046	Canola	cytosol	65.26	63.6
Solyc01g094150.2.1	Tomato	nucleus	61.45	62.32
CDY27380	Canola	nucleus	64.66	43.4
Zm00001d029385_P001	Maize	cytosol	15.26	39.79
Zm00001d049686_P001	Maize	plastid	17.27	35.98
Zm00001d039904_P006	Maize	cytosol	30.52	34.94
Zm00001d043410_P002	Maize	cytosol	28.51	34.22
Zm00001d008596_P005	Maize	cytosol	30.72	33.63
Zm00001d014775_P002	Maize	plastid	23.49	29.92
Zm00001d011611_P005	Maize	cytosol	28.92	27.91
Zm00001d011563_P019	Maize	mitochondrion	28.51	27.05
Zm00001d041083_P005	Maize	nucleus	36.35	26.7
Zm00001d036410_P002	Maize	plastid	23.49	24.58
Zm00001d008983_P001	Maize	vacuole	31.33	18.44
Zm00001d039315_P003	Maize	vacuole	30.72	18.19
Zm00001d009702_P001	Maize	endoplasmic reticulum	29.52	17.44
Zm00001d043841_P003	Maize	cytosol	28.92	15.93
Zm00001d052248_P009	Maize	mitochondrion	28.71	14.49
Zm00001d007139_P007	Maize	cytosol, plastid	28.31	13.34
Zm00001d047494_P007	Maize	cytosol	29.12	13.11
Zm00001d029120_P004	Maize	cytosol	28.71	12.7
Zm00001d048689_P004	Maize	plastid	30.12	11.96
Zm00001d007698_P002	Maize	plastid	29.92	11.77

Protein Annotations

Gene3D:1.10.8.60	EntrezGene:100273408	Gene3D:3.40.50.300	MapMan:50.3.6	UniProt:A0A1D6NW80	InterPro:AAA+_ATPase
ProteinID:AQL02370.1	InterPro:ATPase_AAA_CS	InterPro:ATPase_AAA_core	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0005524	InterPro:MIT	InterPro:P-loop_NTPase	PFAM:PF00004	ScanProsite:PS00674	PANTHER:PTHR23074
PANTHER:PTHR23074:SF86	SMART:SM00382	SMART:SM00745	SUPFAM:SSF52540	UniParc:UPI000842D2B8	EnsemblPlantsGene:Zm00001d045483
EnsemblPlants:Zm00001d045483_P002	EnsemblPlants:Zm00001d045483_T002	SEG:seg	:	:	:

Description

AAA-type ATPase family protein

Coordinates

chr9:-:24098474..24105032

Molecular Weight (calculated)

54824.7 Da

IEP (calculated)

9.692

GRAVY (calculated)

-0.333

Length

498 amino acids

Sequence
(BLAST)

001: MSFLRSLADS FSSLLFSSGG GAVSMDAAGA APSPAAVVGE RVAVKLRGYF DLAKEEIDKA VRAEEWGLPD EATAHYRNAM RVMLEAKAAR VPDAVSSSER
101: GQVRVYQEKI AKWQAQVEER LRVLGQRSGE GATAAEVPKK VAANNPIIRT AKTASNSIQR SPLQNSPTFN RGGQASTHQK IGSGASRPVQ KAGGNYDDKL
201: VEMINTTIVD RSPSVKWDDV AGLDKAKQAL MEMVILPSKR RDLFTGLRRP ARGLLLFGPP GNGKTMLAKA VASESEATFF NVSASSLTSK WVGEAEKLVR
301: TLFMVAIDRQ PSVIFMDEVM LHALCTIDSV MSTRLANEND SSRRLKSEFL IQFDGVSSNP DDLVIVIGAT NKPQELDDAV LRRLVKRIYV PLPDPNVRRL
401: LLKNQLKGQS FKLSNHDFER LAVETEGYSG SDLRALCEEA AMMPIRELGP QNILTIKANQ LRPLRYEDFK NAMTVIRPSL QKSKWDELEN WNEEFGSS

Best Arabidopsis Sequence Match ( AT2G45500.1 )
(BLAST)

001: MSFLRGIIDS FSSILNEESK KDPSVSSSST SSESMNGIDG VPVTNERIAY KLKGYFDLAK EEIAKGVRAE EWGLHDDALL HYRNAQRIMN EATSTPSPSY
101: ISSSEKEKVR SYREKISNWQ NQVSERLQAL GKRTGVGMSE NKRTVAYPSS ASVSSTASRY RKTLSQKTPV ARGGVATPRN PKDAAASPKP VKESGNVYDD
201: KLVEMINTTI VDRSPSVKWD DVAGLNGAKQ ALLEMVILPA KRRDLFTGLR RPARGLLLFG PPGNGKTMLA KAVASESQAT FFNVSASSLT SKWVGEAEKL
301: VKTLFQVAIS RQPSVIFMDE IDSIMSTRST SENEASRRLK SEFLIQFDGV TSNPDDLVII IGATNKPQEL DDAVLRRLVK RIYVPLPDSN VRKLLFKTKL
401: KCQPHSLSDG DIDKIVKETE GYSGSDLQAL CEEAAMMPIR ELGANILTIQ ANKVRSLRYD DFRKSMAVIR PSLSKSKWEE LERWNSEFGS N

Arabidopsis Description

AAA-type ATPase family protein [Source:TAIR;Acc:AT2G45500]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.