Factsheet for AT2G45500.5

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 4
extracellular 2
golgi 2
plasma membrane 2
endoplasmic reticulum 2
vacuole 2
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX74745	Canola	cytosol	85.51	89.47
CDY18925	Canola	plastid	64.79	88.95
Bra004917.1-P	Field mustard	cytosol	56.34	87.77
Bra039332.1-P	Field mustard	cytosol	74.25	84.44
CDY37046	Canola	cytosol	82.7	80.43
KRH40573	Soybean	cytosol, plastid	70.83	72.43
VIT_15s0048g01720.t01	Wine grape	cytosol	71.43	72.3
KRH00594	Soybean	cytosol, plastid	71.43	72.3
TraesCS7D01G060200.1	Wheat	cytosol	64.79	67.51
TraesCS7A01G065800.1	Wheat	cytosol	65.19	67.5
TraesCS4A01G422400.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	65.19	67.5
Os06t0130000-02	Rice	cytosol	65.59	66.94
Solyc01g094150.2.1	Tomato	nucleus	66.0	66.8
EER87773	Sorghum	cytosol	65.39	66.33
Zm00001d045483_P002	Maize	cytosol	66.0	65.86
GSMUA_Achr10P...	Banana	cytosol	62.37	59.62
HORVU7Hr1G013190.8	Barley	plastid	65.39	58.14
CDY27380	Canola	nucleus	84.31	56.47
AT2G27600.1	Thale cress	cytosol	31.59	36.09
AT2G34560.2	Thale cress	cytosol	27.57	34.86
AT1G80350.1	Thale cress	cytosol	30.18	28.68
AT4G27680.1	Thale cress	endoplasmic reticulum, plasma membrane	22.94	28.64
AT5G53540.1	Thale cress	endoplasmic reticulum	22.94	28.29
AT3G27120.1	Thale cress	nucleus	35.81	26.18
AT1G64110.2	Thale cress	cytosol	29.38	17.61
AT5G52882.1	Thale cress	extracellular, vacuole	28.37	17.01
AT4G28000.2	Thale cress	extracellular	27.57	16.47
AT1G50140.1	Thale cress	mitochondrion	31.59	15.65
AT3G19740.1	Thale cress	cytosol, mitochondrion, plastid	30.58	15.31
AT4G24860.1	Thale cress	cytosol, plastid	29.98	13.28
AT1G62130.1	Thale cress	cytosol, plastid	25.75	12.27
AT1G02890.1	Thale cress	plastid	30.18	12.04
AT4G02480.1	Thale cress	plastid	29.98	11.78

Protein Annotations

Gene3D:1.10.8.60	Gene3D:1.20.58.280	Gene3D:3.40.50.300	MapMan:50.3.6	EntrezGene:819158	UniProt:A0A1P8AX50
InterPro:AAA+_ATPase	ProteinID:ANM61215.1	ArrayExpress:AT2G45500	EnsemblPlantsGene:AT2G45500	RefSeq:AT2G45500	TAIR:AT2G45500
RefSeq:AT2G45500-TAIR-G	EnsemblPlants:AT2G45500.5	InterPro:ATPase_AAA_CS	InterPro:ATPase_AAA_core	ncoils:Coil	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	InterPro:MIT	RefSeq:NP_001323445.1	InterPro:P-loop_NTPase
PFAM:PF00004	ScanProsite:PS00674	PANTHER:PTHR23074	PANTHER:PTHR23074:SF86	SMART:SM00382	SMART:SM00745
SUPFAM:SSF52540	UniParc:UPI000848C7A2	SEG:seg	:	:	:

Description

AAA-type ATPase family protein [Source:TAIR;Acc:AT2G45500]

Coordinates

chr2:-:18749802..18752697

Molecular Weight (calculated)

55160.8 Da

IEP (calculated)

9.405

GRAVY (calculated)

-0.411

Length

497 amino acids

Sequence
(BLAST)

001: MIDFIVYCLD MSFLRGIIDS FSSILNEESK KDPSVSSSST SSESMNGIDG VPVTNERIAY KLKGYFDLAK EEIAKGVRAE EWGLHDDALL HYRNAQRIMN
101: EATSTPSPSY ISSSEKEKVR SYREKISNWQ NQVSERLQAL GVGMSENKRT VAYPSSASVS STASRYRKTL SQKTPVARGG VATPRNPKDA AASPKPVKES
201: GNVYDDKLVE MINTTIVDRS PSVKWDDVAG LNGAKQALLE MVILPAKRRD LFTGLRRPAR GLLLFGPPGN GKTMLAKAVA SESQATFFNV SASSLTSKWV
301: GEAEKLVKTL FQVAISRQPS VIFMDEIDSI MSTRSTSENE ASRRLKSEFL IQFDGVTSNP DDLVIIIGAT NKPQELDDAV LRRLVKRIYV PLPDSNVRKL
401: LFKTKLKCQP HSLSDGDIDK IVKETEGYSG SDLQALCEEA AMMPIRELGA NILTIQANKV RSLRYDDFRK SMAVIRPSLS KSKWEELERW NSEFGSN

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.