Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 3
- cytosol 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH57222 | Soybean | cytosol | 37.34 | 66.83 |
| Solyc06g071980.2.1 | Tomato | cytosol | 40.02 | 59.08 |
| AT1G62130.1 | Thale cress | cytosol, plastid | 52.67 | 56.66 |
| CDX92656 | Canola | cytosol | 21.39 | 55.68 |
| VIT_17s0000g01550.t01 | Wine grape | cytosol, plastid | 52.85 | 48.77 |
| Solyc06g072000.1.1 | Tomato | plastid | 44.38 | 48.49 |
| KRH63756 | Soybean | cytosol, plastid | 53.21 | 48.38 |
| KRH03951 | Soybean | nucleus | 52.67 | 48.28 |
| KRH54195 | Soybean | plastid | 52.58 | 47.66 |
| Solyc03g110900.2.1 | Tomato | nucleus | 50.18 | 47.11 |
| AT1G02890.1 | Thale cress | plastid | 45.28 | 40.77 |
| AT4G27680.1 | Thale cress | endoplasmic reticulum, plasma membrane | 14.44 | 40.7 |
| AT4G02480.1 | Thale cress | plastid | 45.63 | 40.47 |
| AT5G53540.1 | Thale cress | endoplasmic reticulum | 13.99 | 38.96 |
| AT1G64110.2 | Thale cress | cytosol | 27.72 | 37.52 |
| AT5G52882.1 | Thale cress | extracellular, vacuole | 27.18 | 36.79 |
| AT4G28000.2 | Thale cress | extracellular | 27.18 | 36.66 |
| AT2G34560.2 | Thale cress | cytosol | 11.41 | 32.57 |
| AT2G45500.5 | Thale cress | cytosol | 13.28 | 29.98 |
| AT1G50140.1 | Thale cress | mitochondrion | 25.49 | 28.51 |
| AT3G19740.1 | Thale cress | cytosol, mitochondrion, plastid | 25.04 | 28.3 |
| AT2G27600.1 | Thale cress | cytosol | 10.52 | 27.13 |
| AT1G80350.1 | Thale cress | cytosol | 12.57 | 26.96 |
| AT3G27120.1 | Thale cress | nucleus | 15.15 | 25.0 |
Protein Annotations
| Gene3D:1.10.8.60 | Gene3D:3.40.50.300 | MapMan:35.1 | EntrezGene:828589 | InterPro:AAA+_ATPase | ProteinID:AEE84971.1 |
| ArrayExpress:AT4G24860 | EnsemblPlantsGene:AT4G24860 | RefSeq:AT4G24860 | TAIR:AT4G24860 | RefSeq:AT4G24860-TAIR-G | EnsemblPlants:AT4G24860.1 |
| TAIR:AT4G24860.1 | InterPro:ATPase_AAA_CS | InterPro:ATPase_AAA_core | Unigene:At.32315 | UniProt:F4JRR2 | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0016787 | GO:GO:0016887 | RefSeq:NP_194217.2 | InterPro:P-loop_NTPase |
| PFAM:PF00004 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0007611 | PO:PO:0009031 | PO:PO:0009046 |
| PO:PO:0025022 | ScanProsite:PS00674 | PANTHER:PTHR23074 | PANTHER:PTHR23074:SF84 | SMART:SM00382 | SUPFAM:SSF52540 |
| UniParc:UPI000034F10E | SEG:seg | : | : | : | : |
Description
P-loop containing nucleoside triphosphate hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JRR2]
Coordinates
chr4:-:12801379..12808190
Molecular Weight (calculated)
124157.0 Da
IEP (calculated)
6.842
GRAVY (calculated)
-0.357
Length
1122 amino acids
Sequence
(BLAST)
(BLAST)
0001: MVSPGRSDST SGENNNPPDG SSGKRSPSSP ADKSPSKRQK LEDGGDTLPP SDSSKCVLGD TTPTSGDSQI DASAAAATTS QPPPVAQAIL QEKASFERWT
0101: YVHSRFENPW CRLLSQSAQY PSINIFLSVF KFLDGELSSY SFKITRIQRK GNVLAVLETM GNNGHMWING NYAEGNINHV LNSGDEVVYQ QMPIVAAKPG
0201: SVQVPAGKFL DLERMTGHSI ISSLERLIHA SSKSHQAPES MVQVDGMEGI FSVNNQDSKM EILDEKNEVT SNSQQASTSG NGLQSAIFRE AIQAGFVRGE
0301: NMEVSFKNFP YYLSEYTKAA LLYASYIHLK KKEYVQFVSD MTPMNPRILL SGPAGSEIYQ ETLAKALARD LEAKLLIFDS YPILGFTRGK FLHLHLFVYF
0401: PDYGYEITAL TAKEVESLRD GLASNKSCKL PNQSIELIDQ GKSSDLSAGG GVASSLSPAA SSDSDSQLQL EPETLPRSVN HTLKKGMPPL HCLQQKILLQ
0501: SSWISGLRIL HLEEKNTCRG PPNGTTGKVI LVFDENPSAK VGVRFDKPIP DGVDLGELCE SGHGFFCKAT DLPFKSSSFK DLVRLLVNTL FEVVHSESRT
0601: CPFILFLKDA EKSVAGNFDL YSAFQIRLEY LPENVIVICS QTHSDHLKVK DIGRQKKQGK EVPHATELLA ELFENKITIQ MPQDEKRLTL WKHQMDRDAE
0701: TSKVKSNFNH LRMVLRRRGL GCEGLETTWS RMCLKDLTLQ RDSVEKIIGW AFGNHISKNP DTDPAKVTLS RESIEFGIGL LQNDLKGSTS SKKDIVVENV
0801: FEKRLLSDVI LPSDIDVTFD DIGALEKVKD ILKELVMLPL QRPELFCKGE LTKPCKGILL FGPPGTGKTM LAKAVAKEAD ANFINISMSS ITSKWFGEGE
0901: KYVKAVFSLA SKMSPSVIFV DEVDSMLGRR EHPREHEASR KIKNEFMMHW DGLTTQERER VLVLAATNRP FDLDEAVIRR LPRRLMVGLP DTSNRAFILK
1001: VILAKEDLSP DLDIGEIASM TNGYSGSDLK NLCVTAAHRP IKEILEKEKR ERDAALAQGK VPPPLSGSSD LRALNVEDFR DAHKWVSASV SSESATMTAL
1101: QQWNKLHGEG GSGKQQSFSF YT
0101: YVHSRFENPW CRLLSQSAQY PSINIFLSVF KFLDGELSSY SFKITRIQRK GNVLAVLETM GNNGHMWING NYAEGNINHV LNSGDEVVYQ QMPIVAAKPG
0201: SVQVPAGKFL DLERMTGHSI ISSLERLIHA SSKSHQAPES MVQVDGMEGI FSVNNQDSKM EILDEKNEVT SNSQQASTSG NGLQSAIFRE AIQAGFVRGE
0301: NMEVSFKNFP YYLSEYTKAA LLYASYIHLK KKEYVQFVSD MTPMNPRILL SGPAGSEIYQ ETLAKALARD LEAKLLIFDS YPILGFTRGK FLHLHLFVYF
0401: PDYGYEITAL TAKEVESLRD GLASNKSCKL PNQSIELIDQ GKSSDLSAGG GVASSLSPAA SSDSDSQLQL EPETLPRSVN HTLKKGMPPL HCLQQKILLQ
0501: SSWISGLRIL HLEEKNTCRG PPNGTTGKVI LVFDENPSAK VGVRFDKPIP DGVDLGELCE SGHGFFCKAT DLPFKSSSFK DLVRLLVNTL FEVVHSESRT
0601: CPFILFLKDA EKSVAGNFDL YSAFQIRLEY LPENVIVICS QTHSDHLKVK DIGRQKKQGK EVPHATELLA ELFENKITIQ MPQDEKRLTL WKHQMDRDAE
0701: TSKVKSNFNH LRMVLRRRGL GCEGLETTWS RMCLKDLTLQ RDSVEKIIGW AFGNHISKNP DTDPAKVTLS RESIEFGIGL LQNDLKGSTS SKKDIVVENV
0801: FEKRLLSDVI LPSDIDVTFD DIGALEKVKD ILKELVMLPL QRPELFCKGE LTKPCKGILL FGPPGTGKTM LAKAVAKEAD ANFINISMSS ITSKWFGEGE
0901: KYVKAVFSLA SKMSPSVIFV DEVDSMLGRR EHPREHEASR KIKNEFMMHW DGLTTQERER VLVLAATNRP FDLDEAVIRR LPRRLMVGLP DTSNRAFILK
1001: VILAKEDLSP DLDIGEIASM TNGYSGSDLK NLCVTAAHRP IKEILEKEKR ERDAALAQGK VPPPLSGSSD LRALNVEDFR DAHKWVSASV SSESATMTAL
1101: QQWNKLHGEG GSGKQQSFSF YT
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.