Factsheet for AT1G50140.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 6
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra014239.1-P	Field mustard	mitochondrion	86.34	86.69
CDY45052	Canola	mitochondrion	86.24	86.59
CDY03591	Canola	cytosol, mitochondrion, plastid	86.14	86.49
Os02t0749150-01	Rice	mitochondrion	22.33	83.58
Os06t0225900-01	Rice	cytosol	29.01	79.29
HORVU6Hr1G038660.1	Barley	cytosol, mitochondrion	13.86	78.09
AT3G19740.1	Thale cress	cytosol, mitochondrion, plastid	76.17	76.94
HORVU4Hr1G059020.1	Barley	cytosol, endoplasmic reticulum	17.25	71.78
HORVU4Hr1G059040.2	Barley	cytosol	17.55	69.84
HORVU3Hr1G072480.2	Barley	cytosol	17.15	68.25
HORVU5Hr1G104980.1	Barley	endoplasmic reticulum, mitochondrion	19.04	66.78
VIT_01s0011g02220.t01	Wine grape	cytosol, mitochondrion, plastid	65.0	65.2
Solyc02g014350.2.1	Tomato	mitochondrion	63.51	63.89
KRH24190	Soybean	mitochondrion	64.11	61.89
KRH29161	Soybean	cytosol, mitochondrion	63.91	61.75
TraesCS7A01G184700.1	Wheat	mitochondrion	56.83	58.7
TraesCS7B01G089500.1	Wheat	mitochondrion	56.73	58.48
Zm00001d052248_P009	Maize	mitochondrion	57.53	58.46
EES05524	Sorghum	plastid	57.43	58.36
TraesCS7D01G186200.1	Wheat	mitochondrion	56.53	58.33
TraesCS6D01G284600.1	Wheat	mitochondrion	56.73	57.88
TraesCS6B01G333700.1	Wheat	mitochondrion	56.33	57.71
HORVU6Hr1G075440.6	Barley	mitochondrion	56.43	57.4
TraesCS6A01G305500.1	Wheat	mitochondrion	56.23	57.38
OQU76102	Sorghum	mitochondrion	55.33	57.33
GSMUA_Achr7P07310_001	Banana	mitochondrion	59.72	57.1
HORVU7Hr1G037870.1	Barley	plastid	56.53	54.57
AT4G27680.1	Thale cress	endoplasmic reticulum, plasma membrane	15.45	38.94
AT5G53540.1	Thale cress	endoplasmic reticulum	14.66	36.48
AT1G64110.2	Thale cress	cytosol	26.52	32.09
AT5G52882.1	Thale cress	extracellular, vacuole	26.22	31.73
AT2G45500.5	Thale cress	cytosol	15.65	31.59
AT4G28000.2	Thale cress	extracellular	26.12	31.49
AT2G34560.2	Thale cress	cytosol	12.26	31.3
AT2G27600.1	Thale cress	cytosol	12.76	29.43
AT1G80350.1	Thale cress	cytosol	13.86	26.58
AT4G24860.1	Thale cress	cytosol, plastid	28.51	25.49
AT1G62130.1	Thale cress	cytosol, plastid	26.42	25.41
AT1G02890.1	Thale cress	plastid	31.41	25.28
AT4G02480.1	Thale cress	plastid	30.91	24.51
AT3G27120.1	Thale cress	nucleus	15.15	22.35

Protein Annotations

Gene3D:1.10.8.60	Gene3D:3.40.50.300	MapMan:35.1	EntrezGene:841436	InterPro:AAA+_ATPase	ProteinID:AEE32518.1
ProteinID:ANM59564.1	ProteinID:ANM59566.1	ArrayExpress:AT1G50140	EnsemblPlantsGene:AT1G50140	RefSeq:AT1G50140	TAIR:AT1G50140
RefSeq:AT1G50140-TAIR-G	EnsemblPlants:AT1G50140.1	TAIR:AT1G50140.1	InterPro:ATPase_AAA_CS	InterPro:ATPase_AAA_core	Unigene:At.38089
ncoils:Coil	UniProt:F4I4Y6	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0016787
GO:GO:0016887	RefSeq:NP_001319186.1	RefSeq:NP_001321914.1	RefSeq:NP_175433.2	InterPro:P-loop_NTPase	PFAM:PF00004
PO:PO:0000013	PO:PO:0000037	PO:PO:0000230	PO:PO:0000293	PO:PO:0001016	PO:PO:0001017
PO:PO:0001054	PO:PO:0001078	PO:PO:0001081	PO:PO:0001185	PO:PO:0004507	PO:PO:0007064
PO:PO:0007095	PO:PO:0007098	PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007611
PO:PO:0007616	PO:PO:0008019	PO:PO:0009005	PO:PO:0009006	PO:PO:0009009	PO:PO:0009010
PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046
PO:PO:0009047	PO:PO:0009052	PO:PO:0020030	PO:PO:0020038	PO:PO:0020100	PO:PO:0020137
PO:PO:0025022	PO:PO:0025195	PO:PO:0025281	ScanProsite:PS00674	PANTHER:PTHR23074	PANTHER:PTHR23074:SF95
SMART:SM00382	SUPFAM:SSF52540	UniParc:UPI0001739034	SEG:seg	:	:

Description

p-loop containing nucleoside triphosphate hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I4Y6]

Coordinates

chr1:-:18569727..18579182

Molecular Weight (calculated)

113290.0 Da

IEP (calculated)

6.447

GRAVY (calculated)

-0.601

Length

1003 amino acids

Sequence
(BLAST)

0001: MYTRTIRRNQ RWGFVLQQDK CLVRPVIRDH TGSQSYRSTT SILTDHLRRN HHSHGAIASR DYLSYSWNSQ LRRFSSEGDG NNASEDSRFP LNKDKMGKEK
0101: STVGVEHFDS HAQLGVQDQI EWLNNEKRAS ESRKESPFLN KRERLKNEFL RRIQPWETIQ LSWESFPYYV HEHTKDTLVE CVSSHIKQKS MTSKYGARLD
0201: SSSGRILLQS VPGTELYRER LVRALARDTQ VPLLVLDSSV LAPYDFADDY NEESESDDDI AESDQCTSQS EAEEETDGDN DDTSSSETKI EGTDDEERYL
0301: EISKEVLKKL GADIEDIEKR MSEQLYGSSE VSEAAAVDQD DKAKRPLKKG DQVKYVGSPK KDEAKHRVVL GKISTSDGQK SAFTVIPGRP LSSGQRGEVY
0401: EVIGNRVAVI FEYGDDKTSE GSEKKPAEQP QMLPIHWLDV KDLKYDLDMQ AVDGYIAMEA LNEVLQSIQP LIVYFPDSTQ WLSRAVPKTR RKEFVDKVKE
0501: MFDKLSGPIV MICGQNKIET GSKEREKFTM VLPNLSRVVK LPLPLKGLTE GFTGRGKSEE NEIYKLFTNV MRLHPPKEED TLRLFKKQLG EDRRIVISRS
0601: NINELLKALE EHELLCTDLY QVNTDGVILT KQKAEKAIGW AKNHYLASCP VPLVKGGRLS LPRESLEISI ARLRKLEDNS LKPSQNLKNI AKDEYERNFV
0701: SAVVAPGEIG VKFEDIGALE DVKKALNELV ILPMRRPELF ARGNLLRPCK GILLFGPPGT GKTLLAKALA TEAGANFISI TGSTLTSKWF GDAEKLTKAL
0801: FSFATKLAPV IIFVDEIDSL LGARGGSSEH EATRRMRNEF MAAWDGLRSK DSQRILILGA TNRPFDLDDA VIRRLPRRIY VDLPDAENRL KILKIFLTPE
0901: NLESDFQFEK LAKETEGYSG SDLKNLCIAA AYRPVQELLQ EEQKGARAEA SPGLRSLSLD DFIQSKAKVS PSVAYDATTM NELRKWNEQY GEGGSRTKSP
1001: FGF

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.