Factsheet for TraesCS6D01G284600.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 5
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G305500.1	Wheat	mitochondrion	98.27	98.27
TraesCS6B01G333700.1	Wheat	mitochondrion	97.25	97.65
HORVU6Hr1G075440.6	Barley	mitochondrion	96.95	96.65
Os02t0749150-01	Rice	mitochondrion	24.82	91.04
EES05524	Sorghum	plastid	84.13	83.79
Zm00001d052248_P009	Maize	mitochondrion	83.72	83.38
TraesCS7D01G186200.1	Wheat	mitochondrion	72.84	73.66
CDY24618	Canola	endoplasmic reticulum	17.8	62.28
VIT_01s0011g02220.t01	Wine grape	cytosol, mitochondrion, plastid	62.05	61.0
GSMUA_Achr7P07310_001	Banana	mitochondrion	63.28	59.29
Solyc02g014350.2.1	Tomato	mitochondrion	59.31	58.48
KRH29161	Soybean	cytosol, mitochondrion	61.24	58.0
AT3G19740.1	Thale cress	cytosol, mitochondrion, plastid	58.29	57.7
KRH24190	Soybean	mitochondrion	60.63	57.36
CDY03591	Canola	cytosol, mitochondrion, plastid	57.78	56.86
CDY45052	Canola	mitochondrion	57.68	56.76
AT1G50140.1	Thale cress	mitochondrion	57.88	56.73
Bra014239.1-P	Field mustard	mitochondrion	57.58	56.66
Bra038230.1-P	Field mustard	cytosol, mitochondrion, plastid	55.95	55.44
CDY33415	Canola	cytosol, mitochondrion	56.46	54.63
CDY42204	Canola	cytosol, mitochondrion, plastid	56.05	52.93
TraesCS7D01G381400.1	Wheat	endoplasmic reticulum	15.06	39.78
TraesCS3D01G228100.4	Wheat	cytosol	27.26	33.37
TraesCS3D01G159200.1	Wheat	cytosol, vacuole	27.87	32.78
TraesCS1D01G431700.1	Wheat	mitochondrion	26.96	31.14
TraesCS3D01G271500.1	Wheat	cytosol	12.41	30.5
TraesCS7D01G060200.1	Wheat	cytosol	14.65	30.19
TraesCS7D01G127200.1	Wheat	cytosol	28.89	28.74
TraesCS3D01G294200.1	Wheat	plastid	12.72	28.22
TraesCS6D01G122900.1	Wheat	cytosol	12.0	27.0
TraesCS3D01G053600.1	Wheat	cytosol	12.0	26.94
TraesCS4D01G168600.1	Wheat	cytosol	29.6	26.29
TraesCS2D01G114500.1	Wheat	cytosol, plastid	29.6	25.66
TraesCS4D01G145100.12	Wheat	plastid	31.54	25.24
TraesCS3D01G265900.1	Wheat	cytosol	13.22	24.95
TraesCS5D01G123800.1	Wheat	nucleus	15.56	22.24

Protein Annotations

EnsemblPlants:TraesCS6D01G284600.1	EnsemblPlantsGene:TraesCS6D01G284600	Gene3D:1.10.8.60	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005524	InterPro:AAA+_ATPase	InterPro:ATPase_AAA_CS	InterPro:ATPase_AAA_core	InterPro:P-loop_NTPase
ncoils:Coil	PANTHER:PTHR23074	PANTHER:PTHR23074:SF95	PFAM:PF00004	PFscan:PS51257	ScanProsite:PS00674
SEG:seg	SMART:SM00382	SUPFAM:SSF52540	TIGR:cd00009	MapMan:35.1	:

Description

No Description!

Coordinates

chr6D:-:392271497..392283142

Molecular Weight (calculated)

110033.0 Da

IEP (calculated)

5.462

GRAVY (calculated)

-0.543

Length

983 amino acids

Sequence
(BLAST)

001: MHHAMRLRCL LQHPPFWCKC SSLGISTSGG GCLVRRFSAV GAPRPCDAGR RLCRFYGSKG GVGSAEARGA GAAEAAAGSS GRCSEQEHAR LGERDQQEWL
101: SGERFLSDCK KRESPFLTRR ERFRIEFLRR VVPWEKGNLT WQNFPYYVNE NARQLLRECT ASHLRHKGIT SEYGSRLPSS GRRILLQSLP GTELYRERLV
201: RALAHELRVP LLVLDSSVLA PYDFGEDYSE SEEEDEHGES EDEGSESEME DEGDEDWTSS NEAKSGESDD EDALKSVEEL KKSVDDLKKL VPCTIEEFAK
301: RVVGEEEGTS SESPETAKSS EEDKRPFQRG DKVKYVGSSA VVEADQRIIL GKLPTQDGSR NAYTFISGRT LSNGQRGEVY EINGDQVAVI FDPPAEKLHD
401: GDENSKEENA KPSIYWVDAQ DIAHDHDIES EDWHIAIEAL CEVLPSLEPV IVYFPDSSQW LSRAVPKSNR GEFIQKVDKM FDQLTGPVVM ICGQNMPAAV
501: SKDKDKEPPT LMFQNLTRLS SLPSSLKRWL KVQNDSRPSD ISKIFTNSFI VPLPEEGEQL RVFNNQIEED RKIIISRHNL VELHKVLEEN ELSCVELMHV
601: KSDGVVLTKQ KAAKVIGWAR SHYLSSTVLP SIEGDRLTIP RESLDLAIER LKEQVTKSKN LSQNLKNLAK DEYERNFISS VVPPDEIGVK FDDIGALEDV
701: KRTLDELVAL PMRRPELFSH GNLLRPCKGV LLFGPPGTGK TLLAKALATE AGANFISITG STLTSKWFGD AEKLTKALFS FASRLAPVII FVDEVDSLLG
801: ARGGALEHEA TRKMRNEFMA AWDGLRSKEN QRILILGATN RPFDLDDAVI RRLPRRIYVG LPDAENRKKI LKILLAKENL ESDFKFDELA NATEGYSGSD
901: LKNLCIASAY RPVQELLEEE KKGRVSSNST HLRPLVLDDF IQAKAKVSPS VSHNATSMNE LRKWNEQYGE DGSRTKSPFG FGN

Best Arabidopsis Sequence Match ( AT1G50140.3 )
(BLAST)

0001: MYTRTIRRNQ RWGFVLQQDK CLVRPVIRDH TGSQSYRSTT SILTDHLRRN HHSHGAIASR DYLSYSWNSQ LRRFSSEGDG NNASEDSRFP LNKDKMGKEK
0101: STVGVEHFDS HAQLGVQDQI EWLNNEKRAS ESRKESPFLN KRERLKNEFL RRIQPWETIQ LSWESFPYYV HEHTKDTLVE CVSSHIKQKS MTSKYGARLD
0201: SSSGRILLQS VPGTELYRER LVRALARDTQ VPLLVLDSSV LAPYDFADDY NEESESDDDI AESDQCTSQS EAEEETDGDN DDTSSSETKI EGTDDEERYL
0301: EISKEVLKKL GADIEDIEKR MSEQLYGSSE VSEAAAVDQD DKAKRPLKKG DQVKYVGSPK KDEAKHRVVL GKISTSDGQK SAFTVIPGRP LSSGQRGEVY
0401: EVIGNRVAVI FEYGDDKTSE GSEKKPAEQP QMLPIHWLDV KDLKYDLDMQ AVDGYIAMEA LNEVLQSIQP LIVYFPDSTQ WLSRAVPKTR RKEFVDKVKE
0501: MFDKLSGPIV MICGQNKIET GSKEREKFTM VLPNLSRVVK LPLPLKGLTE GFTGRGKSEE NEIYKLFTNV MRLHPPKEED TLRLFKKQLG EDRRIVISRS
0601: NINELLKALE EHELLCTDLY QVNTDGVILT KQKAEKAIGW AKNHYLASCP VPLVKGGRLS LPRESLEISI ARLRKLEDNS LKPSQNLKNI AKDEYERNFV
0701: SAVVAPGEIG VKFEDIGALE DVKKALNELV ILPMRRPELF ARGNLLRPCK GILLFGPPGT GKTLLAKALA TEAGANFISI TGSTLTSKWF GDAEKLTKAL
0801: FSFATKLAPV IIFVDEIDSL LGARGGSSEH EATRRMRNEF MAAWDGLRSK DSQRILILGA TNRPFDLDDA VIRRLPRRIY VDLPDAENRL KILKIFLTPE
0901: NLESDFQFEK LAKETEGYSG SDLKNLCIAA AYRPVQELLQ EEQKGARAEA SPGLRSLSLD DFIQSKAKVS PSVAYDATTM NELRKWNEQY GEGGSRTKSP
1001: FGF

Arabidopsis Description

p-loop containing nucleoside triphosphate hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I4Y6]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.