CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, cytosol

Predictor Summary:

plastid 2
mitochondrion 4
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra038230.1-P	Field mustard	cytosol, mitochondrion, plastid	94.62	99.29
CDY33415	Canola	cytosol, mitochondrion	95.58	97.93
AT3G19740.1	Thale cress	cytosol, mitochondrion, plastid	82.04	86.0
Os02t0749150-01	Rice	mitochondrion	21.42	83.21
Os06t0225900-01	Rice	cytosol	28.34	80.38
HORVU6Hr1G038660.1	Barley	cytosol, mitochondrion	13.06	76.4
CDY45052	Canola	mitochondrion	69.45	72.37
CDY03591	Canola	cytosol, mitochondrion, plastid	69.36	72.27
CDY24618	Canola	endoplasmic reticulum	19.5	72.24
HORVU4Hr1G059020.1	Barley	cytosol, endoplasmic reticulum	16.62	71.78
HORVU4Hr1G059040.2	Barley	cytosol	17.2	71.03
HORVU3Hr1G072480.2	Barley	cytosol	16.71	69.05
HORVU5Hr1G104980.1	Barley	endoplasmic reticulum, mitochondrion	18.16	66.08
Solyc02g014350.2.1	Tomato	mitochondrion	60.61	63.29
VIT_01s0011g02220.t01	Wine grape	cytosol, mitochondrion, plastid	60.42	62.9
KRH24190	Soybean	mitochondrion	61.48	61.6
KRH29161	Soybean	cytosol, mitochondrion	60.9	61.08
TraesCS7D01G186200.1	Wheat	mitochondrion	53.31	57.1
TraesCS7A01G184700.1	Wheat	mitochondrion	53.12	56.95
TraesCS7B01G089500.1	Wheat	mitochondrion	53.12	56.83
EES05524	Sorghum	plastid	53.79	56.74
Zm00001d052248_P009	Maize	mitochondrion	53.51	56.43
OQU76102	Sorghum	mitochondrion	52.45	56.41
GSMUA_Achr7P07310_001	Banana	mitochondrion	56.48	56.05
TraesCS6D01G284600.1	Wheat	mitochondrion	52.93	56.05
TraesCS6B01G333700.1	Wheat	mitochondrion	52.55	55.87
TraesCS6A01G305500.1	Wheat	mitochondrion	52.26	55.34
HORVU6Hr1G075440.6	Barley	mitochondrion	52.26	55.17
HORVU7Hr1G037870.1	Barley	plastid	53.51	53.61
CDX92656	Canola	cytosol	16.43	39.68
CDY71574	Canola	endoplasmic reticulum, plasma membrane	14.6	38.78
CDX92836	Canola	endoplasmic reticulum, plasma membrane	14.51	38.62
CDY29857	Canola	endoplasmic reticulum, plasma membrane	14.51	38.62
CDY19035	Canola	endoplasmic reticulum	14.51	38.52
CDY55344	Canola	endoplasmic reticulum	14.41	38.27
CDY30236	Canola	endoplasmic reticulum	14.41	38.27
CDY38752	Canola	endoplasmic reticulum	13.74	37.05
CDY18925	Canola	plastid	12.78	36.74
CDY14372	Canola	endoplasmic reticulum	13.74	36.02
CDY47077	Canola	endoplasmic reticulum, plasma membrane	13.26	35.48
CDY20251	Canola	endoplasmic reticulum	13.64	35.32
CDX96166	Canola	cytosol	21.42	32.84
CDX84641	Canola	cytosol	11.62	32.27
CDY49165	Canola	extracellular, plasma membrane	24.21	32.27
CDY56163	Canola	extracellular, vacuole	24.78	32.05
CDY51824	Canola	extracellular, plasma membrane	24.78	32.01
CDY08360	Canola	endoplasmic reticulum	25.55	32.01
CDX79566	Canola	cytosol	11.53	31.91
CDY38192	Canola	plasma membrane	25.46	31.89
CDY17260	Canola	cytosol	11.72	31.85
CDY19639	Canola	extracellular, vacuole	24.5	31.76
CDX84306	Canola	cytosol	11.72	31.61
CDX93578	Canola	cytosol	12.87	31.16
CDX95077	Canola	cytosol	12.87	31.09
CDX71438	Canola	cytosol	12.49	30.3
CDY31186	Canola	cytosol	12.58	30.18
CDX74745	Canola	cytosol	13.74	30.11
CDY04504	Canola	cytosol	12.49	30.09
CDX83275	Canola	cytosol	12.49	30.02
CDX91317	Canola	plastid	29.68	29.21
CDX90936	Canola	plastid	30.64	29.16
CDY32485	Canola	plastid	30.45	28.77
CDY37046	Canola	cytosol	13.83	28.18
CDX89214	Canola	extracellular, plasma membrane	20.46	28.1
CDX97266	Canola	plastid	30.45	28.03
CDX89933	Canola	plastid	29.97	26.99
CDX92857	Canola	endoplasmic reticulum, extracellular, plasma membrane	18.16	26.85
CDY37590	Canola	cytosol	13.16	26.81
CDY38662	Canola	cytosol	13.26	26.74
CDY50381	Canola	plastid	30.64	26.56
CDY29873	Canola	endoplasmic reticulum, extracellular, plasma membrane	17.87	26.53
CDY18018	Canola	plastid	30.93	26.39
CDY19014	Canola	endoplasmic reticulum, extracellular	18.06	26.18
CDY18129	Canola	cytosol, plastid	30.36	26.03
CDY57698	Canola	cytosol	13.26	25.99
CDX79393	Canola	cytosol	13.16	25.9
CDY22053	Canola	plastid	30.55	25.87
CDY28494	Canola	plastid	15.47	24.85
CDY34176	Canola	plastid	15.27	24.54
CDY27380	Canola	nucleus	13.74	19.27
CDX89934	Canola	cytosol	0.29	1.15

Protein Annotations

Gene3D:1.10.8.60	Gene3D:3.40.50.300	MapMan:35.1	GO:A0A078HXY1	UniProt:A0A078HXY1	InterPro:AAA+_ATPase
InterPro:ATPase_AAA_CS	InterPro:ATPase_AAA_core	EnsemblPlants:CDY42204	ProteinID:CDY42204	ProteinID:CDY42204.1	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	EnsemblPlantsGene:GSBRNA2T00074416001	InterPro:P-loop_NTPase	PFAM:PF00004
ScanProsite:PS00674	PANTHER:PTHR23074	PANTHER:PTHR23074:SF95	SMART:SM00382	SUPFAM:SSF52540	UniParc:UPI0004EE8C73
SEG:seg	:	:	:	:	:

Description

BnaA01g25910DBnaA01g25910D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HXY1]

Coordinates

chrLK032518:-:86708..93630

Molecular Weight (calculated)

116669.0 Da

IEP (calculated)

6.565

GRAVY (calculated)

-0.505

Length

1041 amino acids

Sequence
(BLAST)

0001: MYTRAIKRNQ RWGLVLQQAK YLVRPAIRDY TVSRSYGLTN HLTSNANLRR GSLFRSFSPH GGGTSIASRS SLRLSKNIQL RSFSSEGDDK HVSLNKGSDI
0101: GDGKTGKEKT SCGVGHLDSH AQLGEQDQIE WLSNEKLASE CKKKESPLLS RRDRFKNEFL RRVQPWEKIQ LSWETFPYYI HDHTKNILVE CVTSHIRQRN
0201: ATSMYGARLD SSSGRILLQG LPGTDLYQER LVRALARDVQ VPLLVLDSSV LAPYDFSDEY NEDSESDGEN AEAEADEGTT ESEAEEDSGA NSEEDSEAKT
0301: DGSDNEEARL EVTEEDIKKI VPKLEELGEL VAEELHEAGG ACEAAAVEHS DKARRPARKG DRVKYVGPSK KGDAKHSLLC QQQDMFNFCA ILSFSVLRKG
0401: IFGLGLDVYH CCHSRFLYDV LLSYLVPLTT GQRGEIFEVN GNRVAVVFDN EGDTSSEGSE KKPKKQSQKP NIHWIDVKDL KHDLDMQAED GYIALKALNE
0501: VLQSTQPLIV YFPESSRWLS RAVPKAKRNE FVDKVEEMFD KVSGPVVLIC GRNKIETASK GREKFTMILP NFGRIAKLPL PLKHLTEGLS GRKSSDDNEI
0601: YKLFTNVMNL LPPKEEDVLA VFNKQLVEDR RIVVSRSNLN EILKALEENE LLCTDLYQVN TDDVILTKQR AEKVVGWARN HYLSSCSKPL IKEDRLILPR
0701: ESIEISVKRL KAQEDISRKP SHSLKNIAKD EFESNFVSAV VAPEEIGVKF DDVGALEHVK KTLNELVILP MRRPELFTRG NLLRPCKGIL LFGPPGTGKT
0801: LLAKALATEA GANFISITGS SLTSKWFGDA EKLTKALFSF ASKLAPVIIF VDEVDSLLGA RGGSHEHEAT RRMRNEFMAA WDGLRSKDSQ RILILGATNR
0901: PFDLDDAVIR RLPRRIYVDL PDADNRLKIL KIFLTPENLE TGFEFEKLAK ETEGYSGSDL KNLCIAAAYR PVQELLQEEN KGSGANGVAP DLRPLSLDDF
1001: IQSKTKVSPS VSYDATTMNE LRKWNEQYGE GGSRTKSPFG F

Best Arabidopsis Sequence Match ( AT3G19740.1 )
(BLAST)

001: MYTRALKRNQ RWGLVLQQAK YLVRPVVRDY TVSRYCGFTN KLTNSENLTR KSLLGSFSPR GGTIASGNHL SILKNSQLRS FSSEGDGRNA SEDKHISLNK
101: ENGVDDGKTG KEKSNNGVGH LDSHAQLGEQ DQIEWLNNEK LASECKKKES PFVNRRERFK NEFLRRIQPW EKIQLSWETF PYYIHDHTKD ILVECVTSHI
201: RQKNAASIYG ARLDSSSGRI LLQSVPGTEL YRERLVRALA RDVQVPLLVL DSSVLAPYDF ADDYNEESES DGENAEAEAD ESTTESDAEE DSSAQSEEDS
301: EAKADGSDSE EACLEVSEEA IKKIVPKLEE FEKLVAEELH GEACEAAAVE HSDKARRPAK KGDRVKYVGP SKKADAKHRP LSSGQRGEVY EVNGNRVAVI
401: FDIGGDTSSE GGDKKSTEHS HKLHMHWIDV GDLKHDLDMQ AEDGYIALEA LSEVLHSTQP LIVYFPDSSQ WLSRAVPKSK QNEFVDKVQE MFDKLSSPVV
501: MICGRNKIET GSKEREKFTM ILPNFGRLAK LPLPLKRLTE GLTGRKTSED NEIYKLFTNV MNLVPPKEEE NLIVFNKQLG EDRRIVMSRS NLNELLKALE
601: ENELLCTDLY QVNTDGVILT KQRAEKVIGW ARNHYLSSCP SPSIKEGRLI LPRESIEISV KRLKAQEDIS RKPTQNLKNI AKDEFETNFV SAVVAPGEIG
701: VKFDDIGALE HVKKTLNELV ILPMRRPELF TRGNLLRPCK GILLFGPPGT GKTLLAKALA TEAGANFISI TGSTLTSKWF GDAEKLTKAL FSFASKLAPV
801: IIFVDEVDSL LGARGGAFEH EATRRMRNEF MAAWDGLRSK DSQRILILGA TNRPFDLDDA VIRRLPRRIY VDLPDAENRL KILKIFLTPE NLETGFEFDK
901: LAKETEGYSG SDLKNLCIAA AYRPVQELLQ EENKDSVTNA SPDLRPLSLD DFIQSKAKVS PSVAYDATTM NELRKWNEQY GEGGTRTKSP FGF

Arabidopsis Description

P-loop containing nucleoside triphosphate hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JCC9]
SUBAcon: [mitochondrion,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.