CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX90936	Canola	plastid	88.69	98.9
Bra000878.1-P	Field mustard	plastid	92.95	90.58
CDX91317	Canola	plastid	75.49	87.05
Os11t0661400-01	Rice	cytosol	16.8	85.06
CDX97266	Canola	plastid	78.85	85.06
CDY22053	Canola	plastid	85.49	84.87
CDY50381	Canola	plastid	83.52	84.85
AT4G02480.1	Thale cress	plastid	84.59	81.58
Zm00001d029385_P001	Maize	cytosol	12.46	79.58
CDY32485	Canola	plastid	68.77	76.13
CDX89933	Canola	plastid	71.48	75.43
CDY18129	Canola	cytosol, plastid	72.95	73.31
Zm00001d049686_P001	Maize	plastid	14.02	71.55
GSMUA_Achr11P...	Banana	cytosol	38.03	65.82
TraesCS1B01G120800.1	Wheat	cytosol	13.52	65.22
Solyc09g074950.2.1	Tomato	plastid	61.72	60.87
KRH71559	Soybean	cytosol	54.92	60.58
HORVU7Hr1G026880.14	Barley	cytosol	23.03	60.43
Solyc06g084530.2.1	Tomato	extracellular, nucleus	61.8	60.27
VIT_07s0005g00200.t01	Wine grape	plastid	63.52	60.22
KRH71560	Soybean	nucleus	61.07	59.94
KRH31895	Soybean	nucleus	60.74	59.42
Os03t0344700-01	Rice	cytosol	37.7	59.35
GSMUA_Achr8P33760_001	Banana	cytosol	53.11	58.7
KRH31896	Soybean	nucleus	58.69	58.4
GSMUA_Achr11P...	Banana	cytosol	42.21	57.29
GSMUA_Achr3P00740_001	Banana	mitochondrion	52.54	55.88
GSMUA_Achr8P10090_001	Banana	cytosol	49.67	55.75
EES16128	Sorghum	cytosol, plastid	41.15	53.86
KXG29076	Sorghum	plastid	54.18	53.52
CDX92656	Canola	cytosol	18.77	53.13
TraesCS7B01G028300.1	Wheat	cytosol	34.34	53.11
Zm00001d007139_P007	Maize	cytosol, plastid	45.98	53.07
HORVU2Hr1G019730.5	Barley	cytosol, plastid	45.49	52.86
Zm00001d007698_P002	Maize	plastid	54.84	52.84
TraesCS4A01G169300.15	Wheat	plastid	53.11	52.55
TraesCS4D01G145100.12	Wheat	plastid	52.62	52.28
Os07t0672500-02	Rice	cytosol, plastid	46.31	52.27
OQU90457	Sorghum	cytosol, plastid	46.56	51.92
TraesCS4B01G126300.7	Wheat	nucleus	53.52	51.91
TraesCS2A01G113900.1	Wheat	cytosol	46.72	51.77
TraesCS2B01G132900.3	Wheat	cytosol, plastid	46.48	51.55
Zm00001d048689_P004	Maize	plastid	52.79	51.36
TraesCS2D01G114500.1	Wheat	cytosol, plastid	46.89	50.44
HORVU4Hr1G033300.1	Barley	cytosol	53.36	50.27
EER92288	Sorghum	cytosol	45.0	49.46
TraesCS4A01G142800.3	Wheat	cytosol	44.02	48.86
TraesCS4B01G155600.1	Wheat	cytosol	44.02	48.82
TraesCS7D01G127200.1	Wheat	cytosol	39.43	48.68
TraesCS4D01G168600.1	Wheat	cytosol	44.1	48.6
Zm00001d029120_P004	Maize	cytosol	44.51	48.22
Zm00001d047494_P007	Maize	cytosol	43.61	48.1
TraesCS7A01G128400.2	Wheat	cytosol, plastid	39.67	47.73
HORVU4Hr1G046420.6	Barley	cytosol, plastid	44.34	46.84
CDY24618	Canola	endoplasmic reticulum	10.57	45.91
OQU79278	Sorghum	cytosol, plastid	34.43	45.55
CDY71574	Canola	endoplasmic reticulum, plasma membrane	13.77	42.86
CDX92836	Canola	endoplasmic reticulum, plasma membrane	13.69	42.71
CDY29857	Canola	endoplasmic reticulum, plasma membrane	13.69	42.71
CDY19035	Canola	endoplasmic reticulum	13.61	42.35
CDY30236	Canola	endoplasmic reticulum	13.61	42.35
CDY55344	Canola	endoplasmic reticulum	13.61	42.35
CDY14372	Canola	endoplasmic reticulum	13.52	41.56
CDY38752	Canola	endoplasmic reticulum	13.03	41.19
CDY20251	Canola	endoplasmic reticulum	13.44	40.8
CDY56163	Canola	extracellular, vacuole	26.8	40.62
CDY51824	Canola	extracellular, plasma membrane	26.72	40.45
CDY49165	Canola	extracellular, plasma membrane	25.74	40.2
CDY19639	Canola	extracellular, vacuole	26.23	39.85
CDY47077	Canola	endoplasmic reticulum, plasma membrane	12.62	39.59
CDY08360	Canola	endoplasmic reticulum	26.8	39.35
CDY38192	Canola	plasma membrane	26.8	39.35
CDX96166	Canola	cytosol	21.48	38.59
CDX89214	Canola	extracellular, plasma membrane	22.46	36.15
CDX84641	Canola	cytosol	10.9	35.47
CDX79566	Canola	cytosol	10.82	35.11
CDY18925	Canola	plastid	10.41	35.08
CDY17260	Canola	cytosol	10.98	34.99
CDX92857	Canola	endoplasmic reticulum, extracellular, plasma membrane	20.16	34.94
CDY29873	Canola	endoplasmic reticulum, extracellular, plasma membrane	20.0	34.81
CDX84306	Canola	cytosol	10.98	34.72
CDY19014	Canola	endoplasmic reticulum, extracellular	20.25	34.4
CDY45052	Canola	mitochondrion	26.31	32.13
CDY03591	Canola	cytosol, mitochondrion, plastid	26.07	31.83
CDY33415	Canola	cytosol, mitochondrion	26.39	31.69
CDY42204	Canola	cytosol, mitochondrion, plastid	26.39	30.93
CDX74745	Canola	cytosol	11.72	30.11
CDX95077	Canola	cytosol	10.41	29.47
CDX93578	Canola	cytosol	10.33	29.3
CDY37590	Canola	cytosol	12.13	28.96
CDY38662	Canola	cytosol	12.21	28.88
CDY31186	Canola	cytosol	10.25	28.8
CDX79393	Canola	cytosol	12.46	28.73
CDX71438	Canola	cytosol	10.08	28.67
CDY04504	Canola	cytosol	10.08	28.47
CDY57698	Canola	cytosol	12.38	28.44
CDX83275	Canola	cytosol	10.08	28.41
CDY37046	Canola	cytosol	11.64	27.79
CDY28494	Canola	plastid	13.93	26.23
CDY34176	Canola	plastid	13.77	25.93
CDY27380	Canola	nucleus	11.89	19.54
CDX89934	Canola	cytosol	0.33	1.53

Protein Annotations

Gene3D:1.10.8.60	Gene3D:2.60.200.20	Gene3D:3.40.50.300	MapMan:35.1	GO:A0A078G0A2	UniProt:A0A078G0A2
InterPro:AAA+_ATPase	InterPro:ATPase_AAA_CS	InterPro:ATPase_AAA_core	EnsemblPlants:CDY18018	ProteinID:CDY18018	ProteinID:CDY18018.1
GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	EnsemblPlantsGene:GSBRNA2T00002408001
InterPro:P-loop_NTPase	PFAM:PF00004	ScanProsite:PS00674	PANTHER:PTHR23074	PANTHER:PTHR23074:SF70	SMART:SM00382
InterPro:SMAD_FHA_dom_sf	SUPFAM:SSF49879	SUPFAM:SSF52540	UniParc:UPI0004EEC7AE	SEG:seg	:

Description

BnaC03g30900DBnaC03g30900D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G0A2]

Coordinates

chrLK032080:+:569405..577228

Molecular Weight (calculated)

132398.0 Da

IEP (calculated)

5.735

GRAVY (calculated)

-0.321

Length

1220 amino acids

Sequence
(BLAST)

0001: MVETRRSSSA SKRFCSSSSS PEPSSSSPRP TKRSKVKIDA AIESAAAAEP AGSSSASEVP IENQGPVSDP GSESGEPELG SSDPQGVDAE KPVLTDVPVM
0101: EISPEADANP EADVLATPTV AGEVVADGEK SKAGKKRAKA PWAKLLSQYS QNPHRIMRGP VFTVGRRGCD LSIKDQSMPS TLCELKQSDY GGPSVATLEI
0201: TGNGVLVQVN GKCYQKSTCV HLRGGDEVIF TNFGRHAYIF QPLKDENLAA APDRASSNLN ADGSGLDPFQ EAADGNAPGS GYEIRPILRL LGEPSSVDIR
0301: GISKLLDERR EVRELLKEYD LSSTISTRRQ AFKDSLREGV LNGQDIDVSL EDFPYFLSAT TKDVLIASMY VHMEVGSKFA KYASDLSTTC PRILLSGPAG
0401: SEIYQEMLAK ALAKRFGAKL MIVDSLLLPG VGSKFAKYAS DLSTTCPRIL LSGPAGSEIY QEMLAKALAK RFGAKLMIVD SLLLPGGSPA KEAESSKDGS
0501: RRERLSMLAK RAVQAAQALQ HKKPTSSVDA DITGGSTLSS QALPKQEVST ATSKSYIFKA GMLLNILWCD RVKYVGPSSS AISSLQGPPL RGPTVGFQGK
0601: VLLAFEDNCS SKVGIRFDRP VPDGNDLGGL CEEDHGFFCA ATSLRLDGSS SDDADKLAVN EVFEVALSES EGGSLILFLK DIEKSLVGNS DVYATLKSKF
0701: ENLPENIVVM ASQTQLDSRK EKSHPGGFLF TKFGGNQTAL LDLAFPDNFS KLHDRSKETP KSMKQITRLF PNKISIQLPQ DEALLSDWKE KLDRDTELLK
0801: VQANITSILS VLTKNRLDCP DLGTLSIKDQ TLPSESVEKV VGWALSHHLM NCAEPTVKDN KLVISAESIT YGLQMLHGVQ DENKSLKKSL KDVVTENEFE
0901: KKLLSDVIPP SDIGVSFDDI GALENVKDTL KELVMLPLQR PELFDKGQLT KPTKGILLFG PPGTGKTMLA KAVATEAGAN FINISMSSIT SKWFGEGEKY
1001: VKAVFSLASK IAPSVIFVDE VDSMLGRREN PGEHEAMRKM KNEFMVNWDG LRTKDRERVL VLAATNRPFD LDEAVIRRLP RRLMVNLPDA TNRSKILSVI
1101: LSKEEISPDV DLEAIANMTD GYSGSDLKNL CVTAAHLPIR EILEKEKKEK TAAEAENRPT PPLYSCTDIR PLTMADFKAA HEQVCASVST DSSNMNELQQ
1201: WNELYGEGGS RKKTSLSYFM

Best Arabidopsis Sequence Match ( AT4G02480.1 )
(BLAST)

0001: MVETRRSSSA SKRFCASSSS PEASSSQRPN KRSKVKIDAA ASSLEPATAE PAGSSSASEV PIENQGPASD PGSESGEPEL GSSDPQAMDA EKPVVTTDVP
0101: VMENSPETDA NPEVEVLATP TVAGEAVADA DKSKAAKKRA LKAPWAKLLS QYSQNPHRVI RGPVFTVGRR GCDLSIRDQA MPSTLCELKQ SEHGGPSVAS
0201: LEILGNGVIV HVNGKCYQKS TCVHLRGGDE VIFSLNGKHA YIFQPVKDEN LAAPDRASSL SICEARGAPL KGVHVETRAG DVDGASDVDG ASILASLSKL
0301: RSFHLLPPIA KAGKRQQNPA VPVVPSSFND CISDTDMNDA DSNNDHAAVA SVEKIAAAST PGTANENLNV DGSGLDPFQE ADGGNVPAAG YEIRPIVHLL
0401: GESSSFDIRG SISRLLDERR EVKEFLREFD LSSTISTRRQ AFKDSLRGGV LNAQNIDISF ENFPYYLSAT TKGVLMISMY VHMNGGSKYA NFATDLTTAC
0501: PRILLSGPSG SEIYQEMLAK ALAKQFGAKL MIVDSLLLPG GSPAREAESS KEGSRRERLS MLAKRAVQAA QVLQHKKPTS SVDADITGGS TLSSQALPKQ
0601: EVSTATSKSY TFKAGDRVKF VGPSASAISS LQGQLRGPAI GSQGKVALAF EDNCASKIGI RFDRPVQDGN DLGGLCEEDH GFFCAASSLR LEGSSSDDAD
0701: KLAVNEIFEV ALSESEGGSL ILFLKDIEKS LVGNSDVYAT LKSKLETLPE NIVVIASQTQ LDSRKEKSHP GGFLFTKFGG NQTALLDLAF PDNFGKLHDR
0801: SKETPKSMKQ ITRLFPNKIA IQLPQEEALL SDWKEKLDRD TEILKVQANI TSILAVLAKN KLDCPDLGTL CIKDQTLPSE SVEKVVGWAF GHHLMICTEP
0901: IVKDNKLVIS AESISYGLQT LHDIQNENKS LKKSLKDVVT ENEFEKKLLS DVIPPSDIGV SFDDIGALEN VKETLKELVM LPLQRPELFD KGQLTKPTKG
1001: ILLFGPPGTG KTMLAKAVAT EAGANFINIS MSSITSKWFG EGEKYVKAVF SLASKIAPSV IFVDEVDSML GRRENPGEHE AMRKMKNEFM VNWDGLRTKD
1101: RERVLVLAAT NRPFDLDEAV IRRLPRRLMV NLPDATNRSK ILSVILAKEE IAPDVDLEAI ANMTDGYSGS DLKNLCVTAA HFPIREILEK EKKEKTAAQA
1201: ENRPTPPLYS CTDVRSLTMN DFKAAHDQVC ASVSSDSSNM NELQQWNELY GEGGSRKKTS LSYFM

Arabidopsis Description

AAA-type ATPase family protein [Source:UniProtKB/TrEMBL;Acc:Q0WM93]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.