CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, plastid

Predictor Summary:

plastid 4
mitochondrion 1
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX89933	Canola	plastid	90.36	94.9
Os11t0661400-01	Rice	cytosol	16.89	85.06
CDY32485	Canola	plastid	75.54	83.21
AT1G02890.1	Thale cress	plastid	82.54	80.42
Zm00001d029385_P001	Maize	cytosol	12.6	80.1
CDX90936	Canola	plastid	68.95	76.51
CDX91317	Canola	plastid	66.64	76.47
CDX97266	Canola	plastid	70.35	75.51
CDY22053	Canola	plastid	76.36	75.43
CDY50381	Canola	plastid	72.73	73.52
CDY18018	Canola	plastid	73.31	72.95
Zm00001d049686_P001	Maize	plastid	14.09	71.55
TraesCS1B01G120800.1	Wheat	cytosol	13.59	65.22
GSMUA_Achr11P...	Banana	cytosol	37.4	64.4
KRH71559	Soybean	cytosol	57.91	63.56
KRH71560	Soybean	nucleus	63.26	61.79
Solyc09g074950.2.1	Tomato	plastid	62.77	61.6
KRH31896	Soybean	nucleus	61.78	61.17
VIT_07s0005g00200.t01	Wine grape	plastid	64.66	60.99
KRH31895	Soybean	nucleus	62.52	60.87
Solyc06g084530.2.1	Tomato	extracellular, nucleus	62.27	60.43
HORVU7Hr1G026880.14	Barley	cytosol	22.98	60.0
Os03t0344700-01	Rice	cytosol	38.06	59.61
GSMUA_Achr8P33760_001	Banana	cytosol	53.13	58.42
GSMUA_Achr11P...	Banana	cytosol	42.75	57.73
GSMUA_Achr3P00740_001	Banana	mitochondrion	53.62	56.76
GSMUA_Achr8P10090_001	Banana	cytosol	50.41	56.3
KXG29076	Sorghum	plastid	55.6	54.66
TraesCS4D01G145100.12	Wheat	plastid	55.19	54.56
CDX92656	Canola	cytosol	19.28	54.29
TraesCS4A01G169300.15	Wheat	plastid	54.78	53.93
HORVU2Hr1G019730.5	Barley	cytosol, plastid	46.05	53.24
TraesCS7B01G028300.1	Wheat	cytosol	34.6	53.23
TraesCS4B01G126300.7	Wheat	nucleus	55.11	53.18
Zm00001d007698_P002	Maize	plastid	55.27	53.0
EES16128	Sorghum	cytosol, plastid	40.61	52.9
Zm00001d048689_P004	Maize	plastid	54.37	52.63
Zm00001d007139_P007	Maize	cytosol, plastid	45.63	52.41
TraesCS2A01G113900.1	Wheat	cytosol	47.45	52.32
Os07t0672500-02	Rice	cytosol, plastid	46.46	52.17
TraesCS2B01G132900.3	Wheat	cytosol, plastid	47.2	52.09
HORVU4Hr1G033300.1	Barley	cytosol	55.19	51.74
TraesCS2D01G114500.1	Wheat	cytosol, plastid	47.69	51.06
OQU90457	Sorghum	cytosol, plastid	45.72	50.73
TraesCS4A01G142800.3	Wheat	cytosol	44.4	49.04
TraesCS4B01G155600.1	Wheat	cytosol	44.4	49.0
EER92288	Sorghum	cytosol	44.65	48.83
TraesCS4D01G168600.1	Wheat	cytosol	44.48	48.78
Zm00001d029120_P004	Maize	cytosol	44.56	48.05
TraesCS7D01G127200.1	Wheat	cytosol	38.8	47.67
TraesCS7A01G128400.2	Wheat	cytosol, plastid	39.62	47.44
Zm00001d047494_P007	Maize	cytosol	43.0	47.2
HORVU4Hr1G046420.6	Barley	cytosol, plastid	44.65	46.93
OQU79278	Sorghum	cytosol, plastid	34.68	45.66
CDY24618	Canola	endoplasmic reticulum	10.54	45.55
CDY71574	Canola	endoplasmic reticulum, plasma membrane	13.76	42.6
CDX92836	Canola	endoplasmic reticulum, plasma membrane	13.67	42.46
CDY29857	Canola	endoplasmic reticulum, plasma membrane	13.67	42.46
CDY19035	Canola	endoplasmic reticulum	13.59	42.09
CDY30236	Canola	endoplasmic reticulum	13.59	42.09
CDY55344	Canola	endoplasmic reticulum	13.59	42.09
CDY14372	Canola	endoplasmic reticulum	13.51	41.31
CDY38752	Canola	endoplasmic reticulum	13.01	40.93
CDY20251	Canola	endoplasmic reticulum	13.43	40.55
CDY56163	Canola	extracellular, vacuole	26.69	40.25
CDY51824	Canola	extracellular, plasma membrane	26.61	40.07
CDY49165	Canola	extracellular, plasma membrane	25.7	39.95
CDY47077	Canola	endoplasmic reticulum, plasma membrane	12.69	39.59
CDY19639	Canola	extracellular, vacuole	26.11	39.48
CDY08360	Canola	endoplasmic reticulum	26.77	39.11
CDY38192	Canola	plasma membrane	26.77	39.11
CDX96166	Canola	cytosol	21.42	38.29
CDY18925	Canola	plastid	10.71	35.91
CDX84641	Canola	cytosol	11.04	35.73
CDX79566	Canola	cytosol	10.96	35.37
CDX89214	Canola	extracellular, plasma membrane	22.08	35.36
CDY17260	Canola	cytosol	11.12	35.25
CDX84306	Canola	cytosol	11.12	34.97
CDX92857	Canola	endoplasmic reticulum, extracellular, plasma membrane	19.93	34.38
CDY29873	Canola	endoplasmic reticulum, extracellular, plasma membrane	19.77	34.24
CDY19014	Canola	endoplasmic reticulum, extracellular	20.02	33.84
CDY45052	Canola	mitochondrion	26.11	31.73
CDY03591	Canola	cytosol, mitochondrion, plastid	26.03	31.63
CDX74745	Canola	cytosol	12.27	31.37
CDY33415	Canola	cytosol, mitochondrion	26.11	31.2
CDY42204	Canola	cytosol, mitochondrion, plastid	26.03	30.36
CDX95077	Canola	cytosol	10.54	29.7
CDX93578	Canola	cytosol	10.46	29.53
CDY37590	Canola	cytosol	12.27	29.16
CDY38662	Canola	cytosol	12.36	29.07
CDY37046	Canola	cytosol	12.19	28.96
CDY57698	Canola	cytosol	12.6	28.81
CDX79393	Canola	cytosol	12.52	28.73
CDX71438	Canola	cytosol	10.05	28.44
CDY31186	Canola	cytosol	10.13	28.34
CDY04504	Canola	cytosol	10.05	28.24
CDX83275	Canola	cytosol	10.05	28.18
CDY34176	Canola	plastid	14.58	27.31
CDY28494	Canola	plastid	14.5	27.16
CDY27380	Canola	nucleus	12.27	20.08
CDX89934	Canola	cytosol	0.33	1.53

Protein Annotations

Gene3D:1.10.8.60	Gene3D:2.60.200.20	Gene3D:3.40.50.300	MapMan:35.1	GO:A0A078FYD1	UniProt:A0A078FYD1
InterPro:AAA+_ATPase	InterPro:ATPase_AAA_CS	InterPro:ATPase_AAA_core	EnsemblPlants:CDY18129	ProteinID:CDY18129	ProteinID:CDY18129.1
GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	EnsemblPlantsGene:GSBRNA2T00002650001
InterPro:P-loop_NTPase	PFAM:PF00004	ScanProsite:PS00674	PANTHER:PTHR23074	PANTHER:PTHR23074:SF70	SMART:SM00382
InterPro:SMAD_FHA_dom_sf	SUPFAM:SSF49879	SUPFAM:SSF52540	UniParc:UPI0004EE5E4C	SEG:seg	:

Description

BnaC05g01520DBnaC05g01520D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FYD1]

Coordinates

chrLK032083:-:3525..9978

Molecular Weight (calculated)

132218.0 Da

IEP (calculated)

6.736

GRAVY (calculated)

-0.418

Length

1214 amino acids

Sequence
(BLAST)

0001: MVETRRSSSA SKRNSPPETS SSRPTKRSKA TAAEPAGSSS AASDAPIENN QNPVSAPGSE SGEPSKLGTN DPVIANDASC PDADTNQQVQ GLVTPTPTGE
0101: VVAEADKSKK AEKLWLKRTK APWAKLISQY PQNPHRVMRG PVFTVGRRGC DLSIKDQSMP SVLCELRQME QGGPSVASLE IIGTGVLVQV NGKVYQKSTC
0201: VHLRGGDEVV FSNPGKHAYI FQPLKDENLA APDRASSVSI FEAQSAAPRK GLHVETRAGD SSSCSLLASL RKIHNLPFLP PPAKNGKMQQ NPEVSVLPSS
0301: SDDCIPDVDM NDADSSNDHA AIASADKSVV SPSLTANDDL NADGNGMDPS QETEEGVSIP VKEVPKECDS SSASVATRRQ AHKDFLRAGV LNPQDIEVSF
0401: ENFPYFLSGT TKDVLIASTY VHMKSESKFA KYASDLSTVC PRILLSGPAG SEIYQEALAK ALAKNYGAKL MIVDTLLLPG GPTAKESDSS KDSSRRERLT
0501: VIAKRAVQAA AHAAVMQHKK PTSSVEADIT GGSTLNSQAV MRQEVSTATS KSYTFKTGDR VKFVGPATSS VTSFHTAHSA ILSRGPTTGL QGKVLLAFED
0601: NVSSKIGVRF DRPIVDGNDL GGLCEKDRGF FCTATSLRLD SYSSDNADRL AINEIFEVLT NESEKGSLIL FLKDIDKSVS GNTEVYVTLK SKLEKLPENV
0701: VVIASQTQLD NRKEKSHPGG FLFTKFGSNQ TTLLDLAFPD NFGGRLQDRN KEMPKSLKQI TRLFPNKVTI QLPEDEALLL DWKEKLERDT EILKAQANLS
0801: SIRAVLSKNR LECPDLETLC IKDQSLPTDS VEKVVGWAFS HHLMTCSEPT VKDNKLIISA ENITYGLQVL HGIQNENKST KKSLKDVVTE NEFEKKLLSD
0901: VIPPSDIGVS FDDIGALENV KDTLKELVML PLQRPELFGK GQLTKPTKGI LLFGPPGTGK TMLAKAVATE AGANFINISM SSITSKWFGE GEKYVKAVFS
1001: LASKIAPSVI FVDEVDSMLG RRENPGEHEA MRKMKNEFMI NWDGLRTKDK ERVLVLAATN RPFDLDEAVI RRLPRRLMVN LPDSANRSKI LSVILAKEEM
1101: AEDVDLEAIA NMTDGYSGSD LKNLCVTAAH LPIREILEKE KKERSVAQAE NRPMPQLYNS TDIRPLNMKD FKTAHEQVCA SVSTDSSNMN ELQQWNELYG
1201: EGGSRKKTSL SYFM

Best Arabidopsis Sequence Match ( AT1G02890.1 )
(BLAST)

0001: MVDTRRSSSA SKRFCAATSS SSRPTKRSKA AAEPASSSSA SEVPIDNQAP VSDPGSISGD PELRTSDPQS NDAERPVTTT DVPAMETDTN PELEGLVTPT
0101: PAGEVVVEAE KSKSSKKRIA KAPWAKLLSQ FPQNPHLVMR GSVFTVGRRA CDLCIRDHSM PNVLCELRQS EHGGPSVASL EIIGNGVLVQ VNGKIYQRST
0201: CVHLRGGDEI IFTTPGKHAY IFQPLKDENL AAPDRTSSLS LFEAQSAPLK GLHVETRARD SSSVDGTASL LASISKLQNV PFLPPTAKSV KRQQNSEVPV
0301: LPSSCDDFIL DVDLNDADSN NDHAAIASME KTVASTSCAA NDDHDADGNG MDPFQEPEAG NIPDPAYEIR PILSLLGDPS EFDLRGSISK ILVDERREVR
0401: EMPKEYERPS ASVLTRRQAH KDSLRGGILN PQDIEVSFEN FPYFLSGTTK DVLMISTYAH IKYGKEYAEY ASDLPTACPR ILLSGPSGSE IYQEMLAKAL
0501: AKQCGAKLMI VDSLLLPGGS TPKEADTTKE SSRRERLSVL AKRAVQAAQA AVLQHKKPIS SVEAGITGGS TLSSQAVRRQ EVSTATSKSY TFKAGDRVRF
0601: LGPSTSSLAS LRAPPRGPAT GFQGKVLLAF EGNGSSKIGV RFDRSIPDGN DLGGLCEEDH GFFCTASSLR LESSSSDDAD KLAINEIFEV AFNESERGSL
0701: ILFLKDIEKS VSGNTDVYIT LKSKLENLPE NIVVIASQTQ LDNRKEKSHP GGFLFTKFGS NQTALLDLAF PDTFGGRLQD RNTEMPKAVK QITRLFPNKV
0801: TIQLPEDEAS LVDWKDKLER DTEILKAQAN ITSIRAVLSK NQLVCPDIEI LCIKDQTLPS DSVEKVVGFA FNHHLMNCSE PTVKDNKLII SAESITYGLQ
0901: LLHEIQNENK STKKSLKDVV TENEFEKKLL SDVIPPSDIG VSFSDIGALE NVKDTLKELV MLPLQRPELF GKGQLTKPTK GILLFGPPGT GKTMLAKAVA
1001: TEAGANFINI SMSSITSKWF GEGEKYVKAV FSLASKIAPS VIFVDEVDSM LGRRENPGEH EAMRKMKNEF MINWDGLRTK DKERVLVLAA TNRPFDLDEA
1101: VIRRLPRRLM VNLPDSANRS KILSVILAKE EMAEDVDLEA IANMTDGYSG SDLKNLCVTA AHLPIREILE KEKKERSVAQ AENRAMPQLY SSTDVRPLNM
1201: NDFKTAHDQV CASVASDSSN MNELQQWNEL YGEGGSRKKT SLSYFM

Arabidopsis Description

AAA-type ATPase family protein [Source:UniProtKB/TrEMBL;Acc:F4HZ82]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.