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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, endoplasmic reticulum

Predictor Summary:
  • plastid 1
  • mitochondrion 1
  • endoplasmic reticulum 4
  • extracellular 3
  • golgi 3
  • plasma membrane 4
  • vacuole 3
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, plasma membrane
Any Predictor:cytosol, plastid, secretory
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra029063.1-P Field mustard endoplasmic reticulum 98.2 97.7
CDY38752 Canola endoplasmic reticulum 94.09 94.82
CDY14372 Canola endoplasmic reticulum 82.78 81.11
CDY20251 Canola endoplasmic reticulum 82.26 79.6
CDY71574 Canola endoplasmic reticulum, plasma membrane 76.09 75.51
CDY29857 Canola endoplasmic reticulum, plasma membrane 75.58 75.19
CDX92836 Canola endoplasmic reticulum, plasma membrane 75.32 74.94
AT5G53540.1 Thale cress endoplasmic reticulum 77.12 74.44
CDY19035 Canola endoplasmic reticulum 74.04 73.47
CDY30236 Canola endoplasmic reticulum 74.04 73.47
CDY55344 Canola endoplasmic reticulum 74.04 73.47
Solyc03g082630.2.1 Tomato endoplasmic reticulum 68.64 70.82
KRH53570 Soybean endoplasmic reticulum, plasma membrane 70.69 70.15
PGSC0003DMT400047633 Potato endoplasmic reticulum 68.12 70.11
KRH64362 Soybean endoplasmic reticulum, plasma membrane 69.67 69.13
Solyc06g053160.2.1 Tomato endoplasmic reticulum, plasma membrane 69.41 68.88
PGSC0003DMT400013963 Potato endoplasmic reticulum 69.15 68.62
KRH15897 Soybean endoplasmic reticulum 68.12 67.95
TraesCS7D01G381400.1 Wheat endoplasmic reticulum 63.5 66.4
TraesCS7B01G287800.1 Wheat golgi 63.5 66.22
TraesCS7A01G384900.1 Wheat endoplasmic reticulum 63.24 65.95
KXG20883 Sorghum endoplasmic reticulum 66.07 65.73
GSMUA_Achr11P... Banana endoplasmic reticulum 65.3 65.46
Os06t0714500-01 Rice plasma membrane 65.81 65.14
HORVU0Hr1G021880.1 Barley endoplasmic reticulum 65.81 64.97
Zm00001d014775_P002 Maize plastid 65.3 64.96
GSMUA_Achr4P05220_001 Banana endoplasmic reticulum 64.01 64.18
HORVU7Hr1G091480.2 Barley plastid 64.27 57.87
Zm00001d036410_P002 Maize plastid 65.55 53.57
VIT_16s0098g01260.t01 Wine grape endoplasmic reticulum 67.87 34.2
CDY18925 Canola plastid 28.53 30.66
CDY24618 Canola endoplasmic reticulum 21.34 29.54
CDX84641 Canola cytosol 26.99 28.0
CDY17260 Canola cytosol 26.99 27.42
CDX79566 Canola cytosol 26.48 27.39
CDX84306 Canola cytosol 26.99 27.2
CDX92656 Canola cytosol 28.79 25.99
CDX93578 Canola cytosol 28.28 25.58
CDX95077 Canola cytosol 28.28 25.52
CDX71438 Canola cytosol 27.76 25.17
CDY04504 Canola cytosol 27.76 25.0
CDY31186 Canola cytosol 27.76 24.88
CDX83275 Canola cytosol 27.51 24.71
CDX74745 Canola cytosol 29.05 23.79
CDY37046 Canola cytosol 29.05 22.11
CDX96166 Canola cytosol 36.5 20.91
CDY37590 Canola cytosol 26.74 20.35
CDY38662 Canola cytosol 26.74 20.16
CDX79393 Canola cytosol 27.25 20.04
CDY57698 Canola cytosol 27.25 19.96
CDY49165 Canola extracellular, plasma membrane 38.05 18.95
CDY19639 Canola extracellular, vacuole 38.05 18.43
CDY56163 Canola extracellular, vacuole 38.05 18.39
CDY51824 Canola extracellular, plasma membrane 38.05 18.36
CDY34176 Canola plastid 30.08 18.06
CDY38192 Canola plasma membrane 38.56 18.05
CDY08360 Canola endoplasmic reticulum 38.56 18.05
CDY28494 Canola plastid 29.82 17.9
CDY27380 Canola nucleus 28.79 15.09
CDX91317 Canola plastid 39.07 14.37
CDX89214 Canola extracellular, plasma membrane 27.76 14.25
CDX90936 Canola plastid 39.59 14.08
CDY32485 Canola plastid 39.85 14.07
CDY45052 Canola mitochondrion 35.48 13.81
CDY03591 Canola cytosol, mitochondrion, plastid 35.22 13.71
CDY33415 Canola cytosol, mitochondrion 35.73 13.68
CDX97266 Canola plastid 39.07 13.44
CDX89933 Canola plastid 39.59 13.32
CDY42204 Canola cytosol, mitochondrion, plastid 35.48 13.26
CDY50381 Canola plastid 39.85 12.91
CDY22053 Canola plastid 40.1 12.69
CDY18129 Canola cytosol, plastid 39.59 12.69
CDY18018 Canola plastid 39.59 12.62
CDY29873 Canola endoplasmic reticulum, extracellular, plasma membrane 21.34 11.84
CDX92857 Canola endoplasmic reticulum, extracellular, plasma membrane 21.08 11.65
CDY19014 Canola endoplasmic reticulum, extracellular 21.34 11.56
CDX89934 Canola cytosol 0.51 0.77
Protein Annotations
Gene3D:1.10.8.60Gene3D:3.40.50.300MapMan:35.1GO:A0A078IAB5UniProt:A0A078IAB5InterPro:AAA+_ATPase
InterPro:ATPase_AAA_CSInterPro:ATPase_AAA_coreEnsemblPlants:CDY47077ProteinID:CDY47077ProteinID:CDY47077.1GO:GO:0000166
GO:GO:0003674GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0016020GO:GO:0016021
EnsemblPlantsGene:GSBRNA2T00086699001InterPro:P-loop_NTPasePFAM:PF00004ScanProsite:PS00674PANTHER:PTHR23074PANTHER:PTHR23074:SF20
SMART:SM00382SUPFAM:SSF52540TMHMM:TMhelixUniParc:UPI0004EF06A0SEG:seg:
Description
BnaA03g12210DBnaA03g12210D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IAB5]
Coordinates
chrLK032696:-:155270..157226
Molecular Weight (calculated)
43400.5 Da
IEP (calculated)
9.062
GRAVY (calculated)
-0.203
Length
389 amino acids
Sequence
(BLAST)
001: MQRSSRKRDS SFLEQLILYV AGAALASLSL YFCARHSDPN REASDKALKR KRELAKRLDR PLIQTNQYED VIAGDVINSR KIDVEFDSIG GLESKKQSLY
101: ELVILPLKRP ELFAYGKLLG PQKGVLLYGP PGTGKTMLAK AIAKESGAVF INVRVSNLMS KWFNVSCSVF SLVAAVFSLA EKLQPAIVFI DEVDSFLGQR
201: RSTGNEAMAI MKTEFMALWD GVATDKNARV MVLGATNRPS ELDEAILRRF AQAFEIGMPD CKERAEIFRV VLKGERVEEG IDYDLVARLC EDYTGSDIFE
301: LCKKAAYLPI REILEEERKG RPVSVPRALT QMDLEKVLAT SKKTQVAASE YSGSRLQDSG WRRPKDSDNV QAVINGISRL LVSGMINQQ
Best Arabidopsis Sequence Match ( AT1G02890.1 )
(BLAST)
0001: MVDTRRSSSA SKRFCAATSS SSRPTKRSKA AAEPASSSSA SEVPIDNQAP VSDPGSISGD PELRTSDPQS NDAERPVTTT DVPAMETDTN PELEGLVTPT
0101: PAGEVVVEAE KSKSSKKRIA KAPWAKLLSQ FPQNPHLVMR GSVFTVGRRA CDLCIRDHSM PNVLCELRQS EHGGPSVASL EIIGNGVLVQ VNGKIYQRST
0201: CVHLRGGDEI IFTTPGKHAY IFQPLKDENL AAPDRTSSLS LFEAQSAPLK GLHVETRARD SSSVDGTASL LASISKLQNV PFLPPTAKSV KRQQNSEVPV
0301: LPSSCDDFIL DVDLNDADSN NDHAAIASME KTVASTSCAA NDDHDADGNG MDPFQEPEAG NIPDPAYEIR PILSLLGDPS EFDLRGSISK ILVDERREVR
0401: EMPKEYERPS ASVLTRRQAH KDSLRGGILN PQDIEVSFEN FPYFLSGTTK DVLMISTYAH IKYGKEYAEY ASDLPTACPR ILLSGPSGSE IYQEMLAKAL
0501: AKQCGAKLMI VDSLLLPGGS TPKEADTTKE SSRRERLSVL AKRAVQAAQA AVLQHKKPIS SVEAGITGGS TLSSQAVRRQ EVSTATSKSY TFKAGDRVRF
0601: LGPSTSSLAS LRAPPRGPAT GFQGKVLLAF EGNGSSKIGV RFDRSIPDGN DLGGLCEEDH GFFCTASSLR LESSSSDDAD KLAINEIFEV AFNESERGSL
0701: ILFLKDIEKS VSGNTDVYIT LKSKLENLPE NIVVIASQTQ LDNRKEKSHP GGFLFTKFGS NQTALLDLAF PDTFGGRLQD RNTEMPKAVK QITRLFPNKV
0801: TIQLPEDEAS LVDWKDKLER DTEILKAQAN ITSIRAVLSK NQLVCPDIEI LCIKDQTLPS DSVEKVVGFA FNHHLMNCSE PTVKDNKLII SAESITYGLQ
0901: LLHEIQNENK STKKSLKDVV TENEFEKKLL SDVIPPSDIG VSFSDIGALE NVKDTLKELV MLPLQRPELF GKGQLTKPTK GILLFGPPGT GKTMLAKAVA
1001: TEAGANFINI SMSSITSKWF GEGEKYVKAV FSLASKIAPS VIFVDEVDSM LGRRENPGEH EAMRKMKNEF MINWDGLRTK DKERVLVLAA TNRPFDLDEA
1101: VIRRLPRRLM VNLPDSANRS KILSVILAKE EMAEDVDLEA IANMTDGYSG SDLKNLCVTA AHLPIREILE KEKKERSVAQ AENRAMPQLY SSTDVRPLNM
1201: NDFKTAHDQV CASVASDSSN MNELQQWNEL YGEGGSRKKT SLSYFM
Arabidopsis Description
AAA-type ATPase family protein [Source:UniProtKB/TrEMBL;Acc:F4HZ82]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.