Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular, plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 5
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 5
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY29873 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 96.88 | 97.29 |
| CDY19014 | Canola | endoplasmic reticulum, extracellular | 90.48 | 88.72 |
| CDX89214 | Canola | extracellular, plasma membrane | 91.76 | 85.22 |
| Bra024235.1-P | Field mustard | endoplasmic reticulum, extracellular, plasma membrane | 96.59 | 82.83 |
| AT4G28000.2 | Thale cress | extracellular | 88.78 | 75.12 |
| CDY19639 | Canola | extracellular, vacuole | 77.56 | 68.0 |
| CDY51824 | Canola | extracellular, plasma membrane | 77.13 | 67.37 |
| CDY56163 | Canola | extracellular, vacuole | 76.99 | 67.33 |
| CDY49165 | Canola | extracellular, plasma membrane | 74.29 | 66.97 |
| Solyc03g007760.2.1 | Tomato | endoplasmic reticulum | 65.77 | 56.05 |
| KRH38312 | Soybean | endoplasmic reticulum | 64.63 | 55.69 |
| VIT_16s0050g01850.t01 | Wine grape | endoplasmic reticulum, vacuole | 66.05 | 55.56 |
| PGSC0003DMT400051401 | Potato | endoplasmic reticulum | 65.34 | 55.42 |
| KRH08780 | Soybean | extracellular, plasma membrane | 63.49 | 54.71 |
| CDY08360 | Canola | endoplasmic reticulum | 63.92 | 54.15 |
| CDY38192 | Canola | plasma membrane | 63.64 | 53.91 |
| CDX96166 | Canola | cytosol | 50.14 | 51.99 |
| Os01t0226400-01 | Rice | plasma membrane | 60.51 | 50.71 |
| HORVU3Hr1G030770.20 | Barley | cytosol, vacuole | 60.37 | 50.54 |
| TraesCS3D01G159200.1 | Wheat | cytosol, vacuole | 59.8 | 50.36 |
| TraesCS3A01G151300.2 | Wheat | cytosol, vacuole | 59.94 | 50.24 |
| Zm00001d008983_P001 | Maize | vacuole | 60.23 | 50.12 |
| TraesCS3B01G178200.1 | Wheat | cytosol, vacuole | 59.66 | 50.0 |
| EES00021 | Sorghum | endoplasmic reticulum | 59.94 | 49.82 |
| Zm00001d039315_P003 | Maize | vacuole | 59.52 | 49.82 |
| GSMUA_Achr9P05420_001 | Banana | cytosol, mitochondrion | 42.76 | 46.17 |
| KRH08789 | Soybean | cytosol | 19.18 | 40.3 |
| KRH08796 | Soybean | cytosol | 9.94 | 40.23 |
| CDX92656 | Canola | cytosol | 17.19 | 28.07 |
| CDX91317 | Canola | plastid | 34.38 | 22.87 |
| CDY38752 | Canola | endoplasmic reticulum | 12.22 | 22.28 |
| CDX90936 | Canola | plastid | 34.52 | 22.21 |
| CDX92836 | Canola | endoplasmic reticulum, plasma membrane | 12.22 | 21.99 |
| CDY29857 | Canola | endoplasmic reticulum, plasma membrane | 12.22 | 21.99 |
| CDY71574 | Canola | endoplasmic reticulum, plasma membrane | 12.22 | 21.94 |
| CDY32485 | Canola | plastid | 34.09 | 21.78 |
| CDX97266 | Canola | plastid | 34.66 | 21.57 |
| CDY19035 | Canola | endoplasmic reticulum | 11.93 | 21.43 |
| CDY30236 | Canola | endoplasmic reticulum | 11.79 | 21.17 |
| CDY55344 | Canola | endoplasmic reticulum | 11.79 | 21.17 |
| CDY47077 | Canola | endoplasmic reticulum, plasma membrane | 11.65 | 21.08 |
| CDX89933 | Canola | plastid | 33.95 | 20.67 |
| CDY50381 | Canola | plastid | 34.8 | 20.4 |
| CDY22053 | Canola | plastid | 35.37 | 20.26 |
| CDY18018 | Canola | plastid | 34.94 | 20.16 |
| CDY14372 | Canola | endoplasmic reticulum | 11.36 | 20.15 |
| CDY03591 | Canola | cytosol, mitochondrion, plastid | 28.41 | 20.02 |
| CDY45052 | Canola | mitochondrion | 28.41 | 20.02 |
| CDY18129 | Canola | cytosol, plastid | 34.38 | 19.93 |
| CDY20251 | Canola | endoplasmic reticulum | 11.36 | 19.9 |
| CDX84306 | Canola | cytosol | 10.8 | 19.69 |
| CDY18925 | Canola | plastid | 10.09 | 19.61 |
| CDY17260 | Canola | cytosol | 10.65 | 19.58 |
| CDX84641 | Canola | cytosol | 10.37 | 19.47 |
| CDX79566 | Canola | cytosol | 10.23 | 19.15 |
| CDY33415 | Canola | cytosol, mitochondrion | 26.85 | 18.6 |
| CDY42204 | Canola | cytosol, mitochondrion, plastid | 26.85 | 18.16 |
| CDX74745 | Canola | cytosol | 12.07 | 17.89 |
| CDY24618 | Canola | endoplasmic reticulum | 6.82 | 17.08 |
| CDY37046 | Canola | cytosol | 11.93 | 16.44 |
| CDX93578 | Canola | cytosol | 9.94 | 16.28 |
| CDX95077 | Canola | cytosol | 9.94 | 16.24 |
| CDY34176 | Canola | plastid | 14.77 | 16.05 |
| CDY28494 | Canola | plastid | 14.77 | 16.05 |
| CDY04504 | Canola | cytosol | 9.66 | 15.74 |
| CDX83275 | Canola | cytosol | 9.66 | 15.7 |
| CDY38662 | Canola | cytosol | 11.51 | 15.7 |
| CDX79393 | Canola | cytosol | 11.79 | 15.69 |
| CDY31186 | Canola | cytosol | 9.66 | 15.67 |
| CDY57698 | Canola | cytosol | 11.79 | 15.63 |
| CDX71438 | Canola | cytosol | 9.52 | 15.62 |
| CDY37590 | Canola | cytosol | 11.22 | 15.46 |
| CDY27380 | Canola | nucleus | 12.07 | 11.46 |
| CDX89934 | Canola | cytosol | 0.57 | 1.53 |
Protein Annotations
| EnsemblPlants:CDX92857 | EnsemblPlantsGene:GSBRNA2T00154693001 | Gene3D:1.10.8.60 | Gene3D:3.40.50.300 | GO:A0A078DVE4 | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005524 | InterPro:ATPase_AAA_core | InterPro:P-loop_NTPase | ncoils:Coil |
| PANTHER:PTHR23074 | PANTHER:PTHR23074:SF98 | PFAM:PF00004 | ProteinID:CDX92857 | ProteinID:CDX92857.1 | SEG:seg |
| SUPFAM:SSF52540 | TMHMM:TMhelix | UniParc:UPI0004EDADF4 | MapMan:35.2 | : | : |
Description
BnaC07g41150D
Coordinates
chrLK031873:+:1149637..1153427
Molecular Weight (calculated)
78680.6 Da
IEP (calculated)
6.131
GRAVY (calculated)
-0.480
Length
704 amino acids
Sequence
(BLAST)
(BLAST)
001: MEQKSVLFSA LGVGVGLGLG LASGQGLGKW ANGSVSAEDG LTGEKIEQEL VRQIVDGRES GVTFDEFPYF LSEKTRLLLT NAAYVHLKQF DISKHTRNLA
101: PASKAILLSG PAEFYQQMLA KALAHYFESK LLLLDVTDFS IKIQSKYGCV KKEPSHKRSI SELTLDKMSN LVGSLSMLTQ REQPRGTLRR LTSGNDLTSR
201: GFEGSSHPPQ LKRNASAASD ISSISSRSGT SVSASSKRST NLCFDERLFL QSLYKVLVSV SEASPIIIYL RDVEKLLQSE RFYKLFQKLL SKLSGPVLLL
301: GSRLLEPEDD CQQVGEGISA LFPYNIEIRP PEDESQLMSW KTRFEDDMKL IQFQDNKNHI AEVLAANDLE CDDLGSVCHA DTMFLSSHIE EIVVTAISYH
401: LMNNKEPEYK NGRLVISSNS LSHGLSIFQE GHRCHENSLK MDRNTDSKGE ESEGIINSEL KSESTPSAQN ECPLPPKAPV NEVPPDNEFE KRIRPEVHWM
501: KPKNHFKNLG ILLFGPPGTG KTMMAKAIAN EAGATTNRPF DLDEAIIRRF ERRIMVGLPS VESREKILRT LLSKEKTENL DFHELAQMTD GYSGSDLKNF
601: CTTAAYRPVR ELIKHECLKD QERKKREEAE KSSSEEGTEA KEEEVSEERV ITLRALSMED MRVAKSQVAA SFAAEGAGMN ELKQWNELYG EGGSRKKEQL
701: SYFL
101: PASKAILLSG PAEFYQQMLA KALAHYFESK LLLLDVTDFS IKIQSKYGCV KKEPSHKRSI SELTLDKMSN LVGSLSMLTQ REQPRGTLRR LTSGNDLTSR
201: GFEGSSHPPQ LKRNASAASD ISSISSRSGT SVSASSKRST NLCFDERLFL QSLYKVLVSV SEASPIIIYL RDVEKLLQSE RFYKLFQKLL SKLSGPVLLL
301: GSRLLEPEDD CQQVGEGISA LFPYNIEIRP PEDESQLMSW KTRFEDDMKL IQFQDNKNHI AEVLAANDLE CDDLGSVCHA DTMFLSSHIE EIVVTAISYH
401: LMNNKEPEYK NGRLVISSNS LSHGLSIFQE GHRCHENSLK MDRNTDSKGE ESEGIINSEL KSESTPSAQN ECPLPPKAPV NEVPPDNEFE KRIRPEVHWM
501: KPKNHFKNLG ILLFGPPGTG KTMMAKAIAN EAGATTNRPF DLDEAIIRRF ERRIMVGLPS VESREKILRT LLSKEKTENL DFHELAQMTD GYSGSDLKNF
601: CTTAAYRPVR ELIKHECLKD QERKKREEAE KSSSEEGTEA KEEEVSEERV ITLRALSMED MRVAKSQVAA SFAAEGAGMN ELKQWNELYG EGGSRKKEQL
701: SYFL
001: MLLSALGVGV GVGVGLGLAS GQAVGKWAGG NSSSNNAVTA DKMEKEILRQ VVDGRESKIT FDEFPYYLSE QTRVLLTSAA YVHLKHFDAS KYTRNLSPAS
101: RAILLSGPAE LYQQMLAKAL AHFFDAKLLL LDVNDFALKI QSKYGSGNTE SSSFKRSPSE SALEQLSGLF SSFSILPQRE ESKAGGTLRR QSSGVDIKSS
201: SMEGSSNPPK LRRNSSAAAN ISNLASSSNQ VSAPLKRSSS WSFDEKLLVQ SLYKVLAYVS KANPIVLYLR DVENFLFRSQ RTYNLFQKLL QKLSGPVLIL
301: GSRIVDLSSE DAQEIDEKLS AVFPYNIDIR PPEDETHLVS WKSQLERDMN MIQTQDNRNH IMEVLSENDL ICDDLESISF EDTKVLSNYI EEIVVSALSY
401: HLMNNKDPEY RNGKLVISSI SLSHGFSLFR EGKAGGREKL KQKTKEESSK EVKAESIKPE TKTESVTTVS SKEEPEKEAK AEKVTPKAPE VAPDNEFEKR
501: IRPEVIPAEE INVTFKDIGA LDEIKESLQE LVMLPLRRPD LFTGGLLKPC RGILLFGPPG TGKTMLAKAI AKEAGASFIN VSMSTITSKW FGEDEKNVRA
601: LFTLASKVSP TIIFVDEVDS MLGQRTRVGE HEAMRKIKNE FMSHWDGLMT KPGERILVLA ATNRPFDLDE AIIRRFERRI MVGLPAVENR EKILRTLLAK
701: EKVDENLDYK ELAMMTEGYT GSDLKNLCTT AAYRPVRELI QQERIKDTEK KKQREPTKAG EEDEGKEERV ITLRPLNRQD FKEAKNQVAA SFAAEGAGMG
801: ELKQWNELYG EGGSRKKEQL TYFL
101: RAILLSGPAE LYQQMLAKAL AHFFDAKLLL LDVNDFALKI QSKYGSGNTE SSSFKRSPSE SALEQLSGLF SSFSILPQRE ESKAGGTLRR QSSGVDIKSS
201: SMEGSSNPPK LRRNSSAAAN ISNLASSSNQ VSAPLKRSSS WSFDEKLLVQ SLYKVLAYVS KANPIVLYLR DVENFLFRSQ RTYNLFQKLL QKLSGPVLIL
301: GSRIVDLSSE DAQEIDEKLS AVFPYNIDIR PPEDETHLVS WKSQLERDMN MIQTQDNRNH IMEVLSENDL ICDDLESISF EDTKVLSNYI EEIVVSALSY
401: HLMNNKDPEY RNGKLVISSI SLSHGFSLFR EGKAGGREKL KQKTKEESSK EVKAESIKPE TKTESVTTVS SKEEPEKEAK AEKVTPKAPE VAPDNEFEKR
501: IRPEVIPAEE INVTFKDIGA LDEIKESLQE LVMLPLRRPD LFTGGLLKPC RGILLFGPPG TGKTMLAKAI AKEAGASFIN VSMSTITSKW FGEDEKNVRA
601: LFTLASKVSP TIIFVDEVDS MLGQRTRVGE HEAMRKIKNE FMSHWDGLMT KPGERILVLA ATNRPFDLDE AIIRRFERRI MVGLPAVENR EKILRTLLAK
701: EKVDENLDYK ELAMMTEGYT GSDLKNLCTT AAYRPVRELI QQERIKDTEK KKQREPTKAG EEDEGKEERV ITLRPLNRQD FKEAKNQVAA SFAAEGAGMG
801: ELKQWNELYG EGGSRKKEQL TYFL
Arabidopsis Description
p-loop containing nucleoside triphosphate hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I5A3]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.