Factsheet for Bra024235.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, plasma membrane, endoplasmic reticulum

Predictor Summary:

nucleus 2
extracellular 5
golgi 4
plasma membrane 5
endoplasmic reticulum 5
vacuole 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY29873	Canola	endoplasmic reticulum, extracellular, plasma membrane	84.17	98.57
CDX92857	Canola	endoplasmic reticulum, extracellular, plasma membrane	82.83	96.59
Bra026293.1-P	Field mustard	endoplasmic reticulum, extracellular	92.81	91.92
AT4G28000.2	Thale cress	extracellular	90.86	89.66
Bra029104.1-P	Field mustard	extracellular, plasma membrane	81.36	81.17
Bra003102.1-P	Field mustard	extracellular, plasma membrane	80.88	80.78
KRH08796	Soybean	cytosol	16.93	79.89
Solyc03g007760.2.1	Tomato	endoplasmic reticulum	70.65	70.22
KRH38312	Soybean	endoplasmic reticulum	69.43	69.77
PGSC0003DMT400051401	Potato	endoplasmic reticulum	70.28	69.52
VIT_16s0050g01850.t01	Wine grape	endoplasmic reticulum, vacuole	70.77	69.41
KRH08780	Soybean	extracellular, plasma membrane	68.82	69.16
Bra027756.1-P	Field mustard	endoplasmic reticulum	68.09	67.27
KRH08789	Soybean	cytosol	27.16	66.57
Os01t0226400-01	Rice	plasma membrane	65.9	64.4
HORVU3Hr1G030770.20	Barley	cytosol, vacuole	65.29	63.73
TraesCS3D01G159200.1	Wheat	cytosol, vacuole	64.8	63.64
Zm00001d008983_P001	Maize	vacuole	65.53	63.59
TraesCS3A01G151300.2	Wheat	cytosol, vacuole	65.04	63.57
GSMUA_Achr9P05420_001	Banana	cytosol, mitochondrion	50.43	63.5
Zm00001d039315_P003	Maize	vacuole	65.04	63.5
TraesCS3B01G178200.1	Wheat	cytosol, vacuole	64.68	63.21
EES00021	Sorghum	endoplasmic reticulum	65.16	63.16
Bra019030.1-P	Field mustard	endoplasmic reticulum, plasma membrane	19.12	40.05
Bra026316.1-P	Field mustard	endoplasmic reticulum	18.64	39.03
Bra029063.1-P	Field mustard	endoplasmic reticulum	17.91	37.6
Bra003048.1-P	Field mustard	endoplasmic reticulum	18.15	37.53
Bra004917.1-P	Field mustard	cytosol	12.67	32.6
Bra005414.1-P	Field mustard	cytosol	14.98	31.38
Bra018640.1-P	Field mustard	cytosol	14.98	28.6
Bra000503.1-P	Field mustard	cytosol	14.98	28.41
Bra012009.1-P	Field mustard	cytosol	14.98	28.41
Bra039332.1-P	Field mustard	cytosol	14.49	27.23
Bra014239.1-P	Field mustard	mitochondrion	32.89	27.03
Bra018548.1-P	Field mustard	plastid	39.46	26.58
Bra000878.1-P	Field mustard	plastid	39.83	26.12
Bra038230.1-P	Field mustard	cytosol, mitochondrion, plastid	31.18	25.81
Bra032579.1-P	Field mustard	plastid	35.81	25.63
Bra036265.1-P	Field mustard	plastid	40.07	25.5
Bra003561.1-P	Field mustard	cytosol	16.44	25.42
Bra008479.1-P	Field mustard	cytosol	16.08	25.0
Bra032982.1-P	Field mustard	plastid	19.37	24.54
Bra022979.1-P	Field mustard	plastid	15.83	22.53
Bra033356.1-P	Field mustard	cytosol, plastid	38.49	21.19

Protein Annotations

Gene3D:1.10.8.60	Gene3D:3.40.50.300	MapMan:35.1	InterPro:AAA+_ATPase	InterPro:ATPase_AAA_CS	InterPro:ATPase_AAA_core
EnsemblPlantsGene:Bra024235	EnsemblPlants:Bra024235.1	EnsemblPlants:Bra024235.1-P	ncoils:Coil	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005524	UniProt:M4E631	InterPro:P-loop_NTPase	PFAM:PF00004	ScanProsite:PS00674
PANTHER:PTHR23074	PANTHER:PTHR23074:SF98	SMART:SM00382	SUPFAM:SSF52540	TMHMM:TMhelix	UniParc:UPI0002540BA6
SEG:seg	:	:	:	:	:

Description

AT5G52882 (E=0.0) | ATP binding / nucleoside-triphosphatase/ nucleotide binding

Coordinates

chrA03:+:26737080..26741194

Molecular Weight (calculated)

91544.2 Da

IEP (calculated)

5.470

GRAVY (calculated)

-0.408

Length

821 amino acids

Sequence
(BLAST)

001: MEQKSVLFSA LGVGVGLGLG LASGQGLGKW ANGSVSAEDG LTGEKIEQEL VRQIVDGRES GVTFDEFPYF LSEKTRLLLT NAAYVHLKQF DISKHTRNLA
101: PASKAILLSG PAEFYQQMLA KALAHYFESK LLLLDVTDFS IKIQSKYGCV KKEPSHKRSI SELTLDKMSN LVGSFSMLTQ REQPRGTLRR LTSGNDLTSR
201: GFEGSSHPPQ LKRNASAASD ISSISSRSGT SVSASSKRST NLCFDERLFL QSLYKVLVSV SEANPIIIYL RDVEKLLQSE RFYKLFQKLL SKLSGPVLLL
301: GSRLLEPEDD CQQVGEGISA LFPYNIEIRP PEDESQLMSW KTRFEDDMKL IQFQDNKNHI AEVLAANDLE CDDLGSVCHA DTMFLSSHIE EIVVTAISYH
401: LMNNKEPEYK NGRLVISSNS LSHGLSIFQE GHSCHENSLK MDRNSDSKGE ESEGMINSEL KSETTPSEKN ECPLPPKVPV NEVPPDNEFE KRIRPEVIPA
501: DEIGVTFADI GSLDETKESL QELVMLPLRR PDLFKGGLLK PCRGILLFGP PGTGKTMMAK AIANEAGASF INVSMSTITS KWFGEDEKNV RALFTLAAKV
601: SPTIIFVDEV DSMLGQRTRA GEHEAMRKIK NEFMTHWDGL MSSSGDRILV LAATNRPFDL DEAIIRRFER RIMVGLPSME SREKILRTLL SKEKTENLDF
701: HELAQMTDGY SGSDLKNFCT TAAYRPVREL IKHECLKDQE RKKREEAEKS SSEEGTEAKE EASEERVITL RGLSMEDMRV AKSQVAASFA AEGAGMNELK
801: QWNELYGEGG SRKQEQLSYF L

Best Arabidopsis Sequence Match ( AT4G28000.2 )
(BLAST)

001: MEQKSVLFSA LGVGVGLGIG LASGQSLGKW ANGSISAEDG LTGEKIEQEL VRQIVDGRES SVTFDEFPYY LSEKTRLLLT SAAYVHLKQS DISKHTRNLA
101: PGSKAILLSG PAEFYQQMLA KALAHYFESK LLLLDITDFS IKIQSKYGCV KKEPSHKRSI SELTMDKMSN LMGSISVLSQ KEATRGTLRR HTSGNDLHSR
201: GFDVTSQPPR LKRNASAASD MSSISSRSAT SVSASSKRSA NLCFDERLFL QSLYKVLVSI SETNPIIIYL RDVEKLCQSE RFYKLFQRLL TKLSGPVLVL
301: GSRLLEPEDD CQEVGEGISA LFPYNIEIRP PEDENQLMSW KTRFEDDMKV IQFQDNKNHI AEVLAANDLE CDDLGSICHA DTMFLSSHIE EIVVSAISYH
401: LMNNKEPEYK NGRLVISSNS LSHGLNILQE GQGCFEDSLK LDTNIDSKVE EGEGITKSES KSETTVPENK NESDTSIPAA KNECPLPPKA PVHEVAPDNE
501: FEKRIRPEVI PANEIGVTFA DIGSLDETKE SLQELVMLPL RRPDLFKGGL LKPCRGILLF GPPGTGKTMM AKAIANEAGA SFINVSMSTI TSKWFGEDEK
601: NVRALFTLAA KVSPTIIFVD EVDSMLGQRT RVGEHEAMRK IKNEFMTHWD GLMSNAGDRI LVLAATNRPF DLDEAIIRRF ERRIMVGLPS VESREKILRT
701: LLSKEKTENL DFQELAQMTD GYSGSDLKNF CTTAAYRPVR ELIKQECLKD QERRKREEAE KNSEEGSEAK EEVSEERGIT LRPLSMEDMK VAKSQVAASF
801: AAEGAGMNEL KQWNDLYGEG GSRKKEQLSY FL

Arabidopsis Description

P-loop containing nucleoside triphosphate hydrolases superfamily protein [Source:TAIR;Acc:AT4G28000]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.