Factsheet for Bra038230.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, plastid, mitochondrion

Predictor Summary:

plastid 3
mitochondrion 5
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY42204	Canola	cytosol, mitochondrion, plastid	99.29	94.62
AT3G19740.1	Thale cress	cytosol, mitochondrion, plastid	85.99	85.9
Os02t0749150-01	Rice	mitochondrion	22.48	83.21
Os06t0225900-01	Rice	cytosol	29.74	80.38
HORVU6Hr1G038660.1	Barley	cytosol, mitochondrion	13.71	76.4
HORVU4Hr1G059020.1	Barley	cytosol, endoplasmic reticulum	17.44	71.78
Bra014239.1-P	Field mustard	mitochondrion	72.08	71.57
HORVU4Hr1G059040.2	Barley	cytosol	18.04	71.03
HORVU3Hr1G072480.2	Barley	cytosol	17.54	69.05
HORVU5Hr1G104980.1	Barley	endoplasmic reticulum, mitochondrion	19.05	66.08
Solyc02g014350.2.1	Tomato	mitochondrion	63.21	62.89
VIT_01s0011g02220.t01	Wine grape	cytosol, mitochondrion, plastid	63.1	62.6
KRH24190	Soybean	mitochondrion	64.21	61.31
KRH29161	Soybean	cytosol, mitochondrion	63.71	60.89
TraesCS7D01G186200.1	Wheat	mitochondrion	55.75	56.89
TraesCS7A01G184700.1	Wheat	mitochondrion	55.54	56.75
EES05524	Sorghum	plastid	56.45	56.74
TraesCS7B01G089500.1	Wheat	mitochondrion	55.65	56.73
Zm00001d052248_P009	Maize	mitochondrion	56.15	56.43
OQU76102	Sorghum	mitochondrion	54.94	56.3
GSMUA_Achr7P07310_001	Banana	mitochondrion	59.17	55.96
TraesCS6D01G284600.1	Wheat	mitochondrion	55.44	55.95
TraesCS6B01G333700.1	Wheat	mitochondrion	55.04	55.77
TraesCS6A01G305500.1	Wheat	mitochondrion	54.74	55.24
HORVU6Hr1G075440.6	Barley	mitochondrion	54.74	55.07
HORVU7Hr1G037870.1	Barley	plastid	55.95	53.42
Bra019030.1-P	Field mustard	endoplasmic reticulum, plasma membrane	15.32	38.78
Bra026316.1-P	Field mustard	endoplasmic reticulum	15.12	38.27
Bra003048.1-P	Field mustard	endoplasmic reticulum	14.31	35.77
Bra004917.1-P	Field mustard	cytosol	11.29	35.11
Bra029063.1-P	Field mustard	endoplasmic reticulum	13.81	35.04
Bra027756.1-P	Field mustard	endoplasmic reticulum	26.61	31.77
Bra024235.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	25.81	31.18
Bra005414.1-P	Field mustard	cytosol	12.3	31.12
Bra029104.1-P	Field mustard	extracellular, plasma membrane	25.6	30.86
Bra003102.1-P	Field mustard	extracellular, plasma membrane	25.5	30.78
Bra018640.1-P	Field mustard	cytosol	13.31	30.7
Bra026293.1-P	Field mustard	endoplasmic reticulum, extracellular	25.4	30.4
Bra000503.1-P	Field mustard	cytosol	13.0	29.79
Bra012009.1-P	Field mustard	cytosol	13.0	29.79
Bra039332.1-P	Field mustard	cytosol	11.9	27.0
Bra003561.1-P	Field mustard	cytosol	14.01	26.18
Bra008479.1-P	Field mustard	cytosol	13.91	26.14
Bra018548.1-P	Field mustard	plastid	32.06	26.09
Bra000878.1-P	Field mustard	plastid	32.56	25.8
Bra032579.1-P	Field mustard	plastid	29.64	25.63
Bra036265.1-P	Field mustard	plastid	32.06	24.65
Bra032982.1-P	Field mustard	plastid	16.03	24.54
Bra022979.1-P	Field mustard	plastid	12.8	22.01
Bra033356.1-P	Field mustard	cytosol, plastid	31.75	21.13

Protein Annotations

Gene3D:1.10.8.60	Gene3D:3.40.50.300	MapMan:35.1	InterPro:AAA+_ATPase	InterPro:ATPase_AAA_CS	InterPro:ATPase_AAA_core
EnsemblPlantsGene:Bra038230	EnsemblPlants:Bra038230.1	EnsemblPlants:Bra038230.1-P	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0005524	UniProt:M4FAW5	InterPro:P-loop_NTPase	PFAM:PF00004	ScanProsite:PS00674	PANTHER:PTHR23074
PANTHER:PTHR23074:SF95	SMART:SM00382	SUPFAM:SSF52540	UniParc:UPI0002544AD1	SEG:seg	:

Description

AT3G19740 (E=0.0) | ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding

Coordinates

chrA01:+:21433907..21440240

Molecular Weight (calculated)

110964.0 Da

IEP (calculated)

6.657

GRAVY (calculated)

-0.577

Length

992 amino acids

Sequence
(BLAST)

001: MYTRAIKRNQ RWGLVLQQAK YLVRPAIRDY TVSRSYGLTN HLTSNANLRR GSLFRSFSPH GGGTSIASRS SLRLSKNIQL RSFSSEGDDK HVSLNKGSDI
101: GDGKTGKEKT SCGVGHLNSH AQLGEQDQIE WLSNEKLASE CKKKESPLLS RRDRFKNEFL RRVQPWEKIQ LSWETFPYYI HDHTKNILVE CVTSHIRQRN
201: ATSMYGARLD SSSGRILLQG LPGTDLCQER LVRALARDVQ VPLLVLDSSV LAPYDFSDEY NEDSESDGEN AEAEADEGTT ESEAEEDSGA NSEEDSEAKT
301: DGSDNEEARL EVTEEDIKKI VPKLEELGEL VAEELHEAGG ACEAAAVEHS DKARRPARKG DRVKYVGPSK KGDAKHRPLT TGQRGEIFEV NGNRVAVVFD
401: NEGDTSSEGS EKKPKKQSQK PNIHWIDVKD LKHDLDMQAE DGYTALKALN EVLQSTQPLI VYFPDSSRWL SRAVPKAKRN EFVDKVEEMF DKVTGPVVLI
501: CGRNKIETAS KGREKFTMIL PNFGRIAKLP LPLKHLTEGL SGRKSSDDNE IYKLFTNVMN LLPPKEEDVL AVFNKQLVED RRIVVSRSNL NEILKALEEN
601: ELLCTDLYQV NTDDVILTKQ RAEKVVGWAR NHYLSSCSKP LIKEDRLILP RESIEISVKR LKAQEDISRK PSHSLKNIAK DEFESNFVSA VVAPEEIGVK
701: FDDVGALEHV KKTLNELVIL PMRRPELFTR GNLLRPCKGI LLFGPPGTGK TLLAKALATE AGANFISITG SSLTSKWFGD AEKLTKALFS FASKLAPVII
801: FVDEVDSLLG ARGGSHEHEA TRRMRNEFMA AWDGLRSKDS QRILILGATN RPFDLDDAVI RRLPRRIYVD LPDADNRLKI LKIFLTPENL ETGFEFEKLA
901: KETEGYSGSD LKNLCIAAAY RPVQELLQEE NKGSGANGAA PDLRPLSLDD FIQSKTKVSP SVSYDATTMN ELRKWNEQYG EGGSRTKSPF GF

Best Arabidopsis Sequence Match ( AT3G19740.1 )
(BLAST)

001: MYTRALKRNQ RWGLVLQQAK YLVRPVVRDY TVSRYCGFTN KLTNSENLTR KSLLGSFSPR GGTIASGNHL SILKNSQLRS FSSEGDGRNA SEDKHISLNK
101: ENGVDDGKTG KEKSNNGVGH LDSHAQLGEQ DQIEWLNNEK LASECKKKES PFVNRRERFK NEFLRRIQPW EKIQLSWETF PYYIHDHTKD ILVECVTSHI
201: RQKNAASIYG ARLDSSSGRI LLQSVPGTEL YRERLVRALA RDVQVPLLVL DSSVLAPYDF ADDYNEESES DGENAEAEAD ESTTESDAEE DSSAQSEEDS
301: EAKADGSDSE EACLEVSEEA IKKIVPKLEE FEKLVAEELH GEACEAAAVE HSDKARRPAK KGDRVKYVGP SKKADAKHRP LSSGQRGEVY EVNGNRVAVI
401: FDIGGDTSSE GGDKKSTEHS HKLHMHWIDV GDLKHDLDMQ AEDGYIALEA LSEVLHSTQP LIVYFPDSSQ WLSRAVPKSK QNEFVDKVQE MFDKLSSPVV
501: MICGRNKIET GSKEREKFTM ILPNFGRLAK LPLPLKRLTE GLTGRKTSED NEIYKLFTNV MNLVPPKEEE NLIVFNKQLG EDRRIVMSRS NLNELLKALE
601: ENELLCTDLY QVNTDGVILT KQRAEKVIGW ARNHYLSSCP SPSIKEGRLI LPRESIEISV KRLKAQEDIS RKPTQNLKNI AKDEFETNFV SAVVAPGEIG
701: VKFDDIGALE HVKKTLNELV ILPMRRPELF TRGNLLRPCK GILLFGPPGT GKTLLAKALA TEAGANFISI TGSTLTSKWF GDAEKLTKAL FSFASKLAPV
801: IIFVDEVDSL LGARGGAFEH EATRRMRNEF MAAWDGLRSK DSQRILILGA TNRPFDLDDA VIRRLPRRIY VDLPDAENRL KILKIFLTPE NLETGFEFDK
901: LAKETEGYSG SDLKNLCIAA AYRPVQELLQ EENKDSVTNA SPDLRPLSLD DFIQSKAKVS PSVAYDATTM NELRKWNEQY GEGGTRTKSP FGF

Arabidopsis Description

P-loop containing nucleoside triphosphate hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JCC9]
SUBAcon: [cytosol,plastid,mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.