Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU90457 | Sorghum | cytosol, plastid | 92.81 | 89.67 |
| Zm00001d029385_P001 | Maize | cytosol | 14.0 | 77.49 |
| Os07t0672500-02 | Rice | cytosol, plastid | 77.39 | 75.67 |
| HORVU2Hr1G019730.5 | Barley | cytosol, plastid | 71.24 | 71.71 |
| TraesCS2B01G132900.3 | Wheat | cytosol, plastid | 73.42 | 70.55 |
| TraesCS2A01G113900.1 | Wheat | cytosol | 73.42 | 70.48 |
| TraesCS2D01G114500.1 | Wheat | cytosol, plastid | 73.32 | 68.34 |
| Zm00001d049686_P001 | Maize | plastid | 15.33 | 67.78 |
| Zm00001d029120_P004 | Maize | cytosol | 64.81 | 60.83 |
| Zm00001d047494_P007 | Maize | cytosol | 63.48 | 60.67 |
| CDX90936 | Canola | plastid | 53.36 | 51.55 |
| CDX91317 | Canola | plastid | 51.56 | 51.51 |
| CDY32485 | Canola | plastid | 52.13 | 50.0 |
| KRH71559 | Soybean | cytosol | 51.28 | 49.01 |
| CDX97266 | Canola | plastid | 51.37 | 48.01 |
| CDX89933 | Canola | plastid | 51.75 | 47.32 |
| CDY50381 | Canola | plastid | 52.32 | 46.05 |
| CDY18018 | Canola | plastid | 53.07 | 45.98 |
| KRH31896 | Soybean | nucleus | 53.26 | 45.92 |
| CDY18129 | Canola | cytosol, plastid | 52.41 | 45.63 |
| Bra032579.1-P | Field mustard | plastid | 49.29 | 45.42 |
| Zm00001d007698_P002 | Maize | plastid | 54.4 | 45.42 |
| Solyc06g084530.2.1 | Tomato | extracellular, nucleus | 53.74 | 45.4 |
| Zm00001d048689_P004 | Maize | plastid | 53.83 | 45.37 |
| KRH71560 | Soybean | nucleus | 53.26 | 45.29 |
| Bra018548.1-P | Field mustard | plastid | 52.13 | 45.2 |
| Solyc09g074950.2.1 | Tomato | plastid | 52.89 | 45.19 |
| KRH31895 | Soybean | nucleus | 53.26 | 45.15 |
| Bra000878.1-P | Field mustard | plastid | 53.26 | 44.97 |
| AT1G02890.1 | Thale cress | plastid | 52.89 | 44.86 |
| CDY22053 | Canola | plastid | 51.94 | 44.67 |
| VIT_07s0005g00200.t01 | Wine grape | plastid | 54.21 | 44.52 |
| AT4G02480.1 | Thale cress | plastid | 52.7 | 44.03 |
| Bra036265.1-P | Field mustard | plastid | 52.41 | 42.95 |
| Zm00001d014775_P002 | Maize | plastid | 15.14 | 40.92 |
| Zm00001d009702_P001 | Maize | endoplasmic reticulum | 29.71 | 37.25 |
| Bra033356.1-P | Field mustard | cytosol, plastid | 51.18 | 36.28 |
| Zm00001d008983_P001 | Maize | vacuole | 28.86 | 36.05 |
| Zm00001d039315_P003 | Maize | vacuole | 28.48 | 35.79 |
| Zm00001d036410_P002 | Maize | plastid | 15.7 | 34.87 |
| Zm00001d043410_P002 | Maize | cytosol | 12.49 | 31.81 |
| Zm00001d052248_P009 | Maize | mitochondrion | 27.44 | 29.38 |
| Zm00001d045483_P002 | Maize | cytosol | 13.34 | 28.31 |
| Zm00001d039904_P006 | Maize | cytosol | 10.97 | 26.67 |
| Zm00001d011611_P005 | Maize | cytosol | 12.87 | 26.36 |
| Zm00001d008596_P005 | Maize | cytosol | 11.07 | 25.71 |
| Zm00001d041083_P005 | Maize | nucleus | 16.08 | 25.07 |
| Zm00001d011563_P019 | Maize | mitochondrion | 12.39 | 24.95 |
| Zm00001d043841_P003 | Maize | cytosol | 12.96 | 15.15 |
| CDX89934 | Canola | cytosol | 0.38 | 1.53 |
Protein Annotations
| Gene3D:1.10.8.60 | EntrezGene:103647932 | Gene3D:3.40.50.300 | MapMan:35.1 | UniProt:A0A1D6F461 | InterPro:AAA+_ATPase |
| InterPro:ATPase_AAA_CS | InterPro:ATPase_AAA_core | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005524 |
| ProteinID:ONM26120.1 | InterPro:P-loop_NTPase | PFAM:PF00004 | ScanProsite:PS00674 | PANTHER:PTHR23074 | PANTHER:PTHR23074:SF138 |
| SMART:SM00382 | SUPFAM:SSF52540 | UniParc:UPI0004DE7E5B | EnsemblPlantsGene:Zm00001d007139 | EnsemblPlants:Zm00001d007139_P007 | EnsemblPlants:Zm00001d007139_T007 |
| SEG:seg | : | : | : | : | : |
Description
AAA-type ATPase family protein
Coordinates
chr2:+:223189607..223205891
Molecular Weight (calculated)
115917.0 Da
IEP (calculated)
8.410
GRAVY (calculated)
-0.390
Length
1057 amino acids
Sequence
(BLAST)
(BLAST)
0001: MVDTRRSSAA KRRGPSEDSS PSPPTTQADP TTAGLPVEPA SPPPSSGSRS GKRAKVAVAR AEDPGAPRGK AVDPAAVDVL DSSVANLQGV ARPPAANVAA
0101: SSAVSNSVGR RKRNQSVRAI PTGEGTLWKP RPAGGRAEAW GRLISQSSEY PSIPIYTTHF TIGNGGKCDL KLTETSPGPL ICKLKHVKRG AALEIYMNKV
0201: VHVNGKALDK AAKVTLIGGD EVMFVSLGTH AYIFQQLLEE KASTPSLCSK CVIQQEQYPV VKDKEIVSSL CKTVGEQSYH PSEENMTFGR HQLLKDDLKK
0301: AAISASDISE SFDNFPYYLS ENTKNVLLSS SYVNLCCKES TKWTKDISSL CKRVLLSGPP GSEIYQELLV KALTKSFGAK LLVIDYSLLS GGQPSKSKES
0401: KPYKKGDRVR YIGPIQSSGF MFEGQRAPDY GSQGEVRLTF AENGSSKVGV RFDKQIPGGI DLGGSCELDH GLFCSVDSLC LDGPGWEDRA KHSFDVVFEF
0501: ASEESQQVPV ILFLKDVEKI CGNNYTYHGL KNKLESFPAG VFIVGSQIQT DARKDKSNNG SPWLKFSYSQ AAILDLAFQD SFGRAGEKNK EALKMSKHIT
0601: KLFPNKVTIE SPEDETELSQ WKQLLGRDIE ILKAKANFLK IQSFLTRHGM ECTDLESVVC VKDRNLTSEC VDKIVGYALS YQLKDHPIQT PGKDARVVLS
0701: GVSLKYGIDL LESIQSGPKK KSTKKSLKDV VTENEFEKRL LPDVIPPDEI GVTFEDIGAL ENVKETLQEL VMLPLQRPEL FSKGQLMKPC KGILLFGPPG
0801: TGKTMLAKAV ATEAGANFIN ISMSSIASKW FGEGEKYVKA VFSLASKISP SVIFVDEVDG MLGRRENPGE HEAMRKMKNE FMVNWDGLRT KDKERVLVLA
0901: ATNRPFDLDE AVVRRLPRRL MVNLPDAPNR KKILSVILAK EDLADDVDLE ALANLTDGYS GSDLKNLCIT AAHRPIREIL EREKKERTLA EAENRPAPPQ
1001: CCSGDVRSLK FSDFKHAHEQ VCASISSDSK NMNELVQWND LYGEGGSRHK TPLSYFM
0101: SSAVSNSVGR RKRNQSVRAI PTGEGTLWKP RPAGGRAEAW GRLISQSSEY PSIPIYTTHF TIGNGGKCDL KLTETSPGPL ICKLKHVKRG AALEIYMNKV
0201: VHVNGKALDK AAKVTLIGGD EVMFVSLGTH AYIFQQLLEE KASTPSLCSK CVIQQEQYPV VKDKEIVSSL CKTVGEQSYH PSEENMTFGR HQLLKDDLKK
0301: AAISASDISE SFDNFPYYLS ENTKNVLLSS SYVNLCCKES TKWTKDISSL CKRVLLSGPP GSEIYQELLV KALTKSFGAK LLVIDYSLLS GGQPSKSKES
0401: KPYKKGDRVR YIGPIQSSGF MFEGQRAPDY GSQGEVRLTF AENGSSKVGV RFDKQIPGGI DLGGSCELDH GLFCSVDSLC LDGPGWEDRA KHSFDVVFEF
0501: ASEESQQVPV ILFLKDVEKI CGNNYTYHGL KNKLESFPAG VFIVGSQIQT DARKDKSNNG SPWLKFSYSQ AAILDLAFQD SFGRAGEKNK EALKMSKHIT
0601: KLFPNKVTIE SPEDETELSQ WKQLLGRDIE ILKAKANFLK IQSFLTRHGM ECTDLESVVC VKDRNLTSEC VDKIVGYALS YQLKDHPIQT PGKDARVVLS
0701: GVSLKYGIDL LESIQSGPKK KSTKKSLKDV VTENEFEKRL LPDVIPPDEI GVTFEDIGAL ENVKETLQEL VMLPLQRPEL FSKGQLMKPC KGILLFGPPG
0801: TGKTMLAKAV ATEAGANFIN ISMSSIASKW FGEGEKYVKA VFSLASKISP SVIFVDEVDG MLGRRENPGE HEAMRKMKNE FMVNWDGLRT KDKERVLVLA
0901: ATNRPFDLDE AVVRRLPRRL MVNLPDAPNR KKILSVILAK EDLADDVDLE ALANLTDGYS GSDLKNLCIT AAHRPIREIL EREKKERTLA EAENRPAPPQ
1001: CCSGDVRSLK FSDFKHAHEQ VCASISSDSK NMNELVQWND LYGEGGSRHK TPLSYFM
0001: MVDTRRSSSA SKRFCAATSS SSRPTKRSKA AAEPASSSSA SEVPIDNQAP VSDPGSISGD PELRTSDPQS NDAERPVTTT DVPAMETDTN PELEGLVTPT
0101: PAGEVVVEAE KSKSSKKRIA KAPWAKLLSQ FPQNPHLVMR GSVFTVGRRA CDLCIRDHSM PNVLCELRQS EHGGPSVASL EIIGNGVLVQ VNGKIYQRST
0201: CVHLRGGDEI IFTTPGKHAY IFQPLKDENL AAPDRTSSLS LFEAQSAPLK GLHVETRARD SSSVDGTASL LASISKLQNV PFLPPTAKSV KRQQNSEVPV
0301: LPSSCDDFIL DVDLNDADSN NDHAAIASME KTVASTSCAA NDDHDADGNG MDPFQEPEAG NIPDPAYEIR PILSLLGDPS EFDLRGSISK ILVDERREVR
0401: EMPKEYERPS ASVLTRRQAH KDSLRGGILN PQDIEVSFEN FPYFLSGTTK DVLMISTYAH IKYGKEYAEY ASDLPTACPR ILLSGPSGSE IYQEMLAKAL
0501: AKQCGAKLMI VDSLLLPGGS TPKEADTTKE SSRRERLSVL AKRAVQAAQA AVLQHKKPIS SVEAGITGGS TLSSQAVRRQ EVSTATSKSY TFKAGDRVRF
0601: LGPSTSSLAS LRAPPRGPAT GFQGKVLLAF EGNGSSKIGV RFDRSIPDGN DLGGLCEEDH GFFCTASSLR LESSSSDDAD KLAINEIFEV AFNESERGSL
0701: ILFLKDIEKS VSGNTDVYIT LKSKLENLPE NIVVIASQTQ LDNRKEKSHP GGFLFTKFGS NQTALLDLAF PDTFGGRLQD RNTEMPKAVK QITRLFPNKV
0801: TIQLPEDEAS LVDWKDKLER DTEILKAQAN ITSIRAVLSK NQLVCPDIEI LCIKDQTLPS DSVEKVVGFA FNHHLMNCSE PTVKDNKLII SAESITYGLQ
0901: LLHEIQNENK STKKSLKDVV TENEFEKKLL SDVIPPSDIG VSFSDIGALE NVKDTLKELV MLPLQRPELF GKGQLTKPTK GILLFGPPGT GKTMLAKAVA
1001: TEAGANFINI SMSSITSKWF GEGEKYVKAV FSLASKIAPS VIFVDEVDSM LGRRENPGEH EAMRKMKNEF MINWDGLRTK DKERVLVLAA TNRPFDLDEA
1101: VIRRLPRRLM VNLPDSANRS KILSVILAKE EMAEDVDLEA IANMTDGYSG SDLKNLCVTA AHLPIREILE KEKKERSVAQ AENRAMPQLY SSTDVRPLNM
1201: NDFKTAHDQV CASVASDSSN MNELQQWNEL YGEGGSRKKT SLSYFM
0101: PAGEVVVEAE KSKSSKKRIA KAPWAKLLSQ FPQNPHLVMR GSVFTVGRRA CDLCIRDHSM PNVLCELRQS EHGGPSVASL EIIGNGVLVQ VNGKIYQRST
0201: CVHLRGGDEI IFTTPGKHAY IFQPLKDENL AAPDRTSSLS LFEAQSAPLK GLHVETRARD SSSVDGTASL LASISKLQNV PFLPPTAKSV KRQQNSEVPV
0301: LPSSCDDFIL DVDLNDADSN NDHAAIASME KTVASTSCAA NDDHDADGNG MDPFQEPEAG NIPDPAYEIR PILSLLGDPS EFDLRGSISK ILVDERREVR
0401: EMPKEYERPS ASVLTRRQAH KDSLRGGILN PQDIEVSFEN FPYFLSGTTK DVLMISTYAH IKYGKEYAEY ASDLPTACPR ILLSGPSGSE IYQEMLAKAL
0501: AKQCGAKLMI VDSLLLPGGS TPKEADTTKE SSRRERLSVL AKRAVQAAQA AVLQHKKPIS SVEAGITGGS TLSSQAVRRQ EVSTATSKSY TFKAGDRVRF
0601: LGPSTSSLAS LRAPPRGPAT GFQGKVLLAF EGNGSSKIGV RFDRSIPDGN DLGGLCEEDH GFFCTASSLR LESSSSDDAD KLAINEIFEV AFNESERGSL
0701: ILFLKDIEKS VSGNTDVYIT LKSKLENLPE NIVVIASQTQ LDNRKEKSHP GGFLFTKFGS NQTALLDLAF PDTFGGRLQD RNTEMPKAVK QITRLFPNKV
0801: TIQLPEDEAS LVDWKDKLER DTEILKAQAN ITSIRAVLSK NQLVCPDIEI LCIKDQTLPS DSVEKVVGFA FNHHLMNCSE PTVKDNKLII SAESITYGLQ
0901: LLHEIQNENK STKKSLKDVV TENEFEKKLL SDVIPPSDIG VSFSDIGALE NVKDTLKELV MLPLQRPELF GKGQLTKPTK GILLFGPPGT GKTMLAKAVA
1001: TEAGANFINI SMSSITSKWF GEGEKYVKAV FSLASKIAPS VIFVDEVDSM LGRRENPGEH EAMRKMKNEF MINWDGLRTK DKERVLVLAA TNRPFDLDEA
1101: VIRRLPRRLM VNLPDSANRS KILSVILAKE EMAEDVDLEA IANMTDGYSG SDLKNLCVTA AHLPIREILE KEKKERSVAQ AENRAMPQLY SSTDVRPLNM
1201: NDFKTAHDQV CASVASDSSN MNELQQWNEL YGEGGSRKKT SLSYFM
Arabidopsis Description
AAA-type ATPase family protein [Source:UniProtKB/TrEMBL;Acc:F4HZ82]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.