Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 2
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G145100.12 | Wheat | plastid | 96.19 | 96.58 |
| TraesCS4B01G126300.7 | Wheat | nucleus | 98.22 | 96.26 |
| Os11t0661400-01 | Rice | cytosol | 18.49 | 94.61 |
| HORVU4Hr1G033300.1 | Barley | cytosol | 96.67 | 92.05 |
| KXG29076 | Sorghum | plastid | 85.89 | 85.75 |
| Zm00001d029385_P001 | Maize | cytosol | 13.22 | 85.34 |
| Zm00001d048689_P004 | Maize | plastid | 84.1 | 82.7 |
| Zm00001d007698_P002 | Maize | plastid | 84.75 | 82.54 |
| Zm00001d049686_P001 | Maize | plastid | 14.27 | 73.64 |
| GSMUA_Achr8P33760_001 | Banana | cytosol | 61.23 | 68.39 |
| GSMUA_Achr3P00740_001 | Banana | mitochondrion | 60.5 | 65.04 |
| KRH71559 | Soybean | cytosol | 51.99 | 57.96 |
| Solyc09g074950.2.1 | Tomato | plastid | 57.18 | 56.99 |
| Solyc06g084530.2.1 | Tomato | extracellular, nucleus | 57.58 | 56.75 |
| VIT_07s0005g00200.t01 | Wine grape | plastid | 59.12 | 56.64 |
| CDY32485 | Canola | plastid | 50.61 | 56.62 |
| CDX91317 | Canola | plastid | 48.58 | 56.62 |
| CDX90936 | Canola | plastid | 49.96 | 56.31 |
| CDX89933 | Canola | plastid | 52.23 | 55.71 |
| KRH71560 | Soybean | nucleus | 55.88 | 55.43 |
| CDX97266 | Canola | plastid | 50.77 | 55.35 |
| KRH31895 | Soybean | nucleus | 55.8 | 55.17 |
| CDY18129 | Canola | cytosol, plastid | 53.93 | 54.78 |
| KRH31896 | Soybean | nucleus | 53.77 | 54.08 |
| Bra018548.1-P | Field mustard | plastid | 52.88 | 53.49 |
| TraesCS7A01G128400.2 | Wheat | cytosol, plastid | 43.71 | 53.16 |
| AT1G02890.1 | Thale cress | plastid | 53.69 | 53.13 |
| Bra000878.1-P | Field mustard | plastid | 53.93 | 53.12 |
| CDY18018 | Canola | plastid | 52.55 | 53.11 |
| TraesCS2A01G113900.1 | Wheat | cytosol | 47.28 | 52.95 |
| CDY50381 | Canola | plastid | 51.18 | 52.54 |
| CDY22053 | Canola | plastid | 52.31 | 52.48 |
| AT4G02480.1 | Thale cress | plastid | 53.77 | 52.41 |
| TraesCS4A01G142800.3 | Wheat | cytosol | 46.63 | 52.32 |
| Bra032579.1-P | Field mustard | plastid | 48.34 | 51.96 |
| Bra036265.1-P | Field mustard | plastid | 53.45 | 51.09 |
| Bra033356.1-P | Field mustard | cytosol, plastid | 54.01 | 44.67 |
| TraesCS7A01G384900.1 | Wheat | endoplasmic reticulum | 12.81 | 42.36 |
| TraesCS3A01G151300.2 | Wheat | cytosol, vacuole | 26.12 | 38.33 |
| TraesCS1A01G423100.1 | Wheat | mitochondrion | 26.12 | 37.79 |
| TraesCS3A01G225200.3 | Wheat | cytosol | 24.66 | 37.67 |
| TraesCS3A01G294400.1 | Wheat | cytosol | 10.54 | 34.39 |
| TraesCS3A01G271900.1 | Wheat | cytosol | 10.79 | 33.25 |
| TraesCS7A01G184700.1 | Wheat | mitochondrion | 25.3 | 32.13 |
| TraesCS6A01G305500.1 | Wheat | mitochondrion | 25.39 | 31.84 |
| TraesCS7A01G065800.1 | Wheat | cytosol | 12.33 | 31.67 |
| TraesCS4A01G422400.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 12.25 | 31.46 |
| TraesCS6A01G133300.1 | Wheat | cytosol | 10.06 | 28.31 |
| TraesCS3A01G054100.1 | Wheat | cytosol | 9.98 | 28.08 |
| TraesCS3A01G265700.1 | Wheat | cytosol | 11.52 | 27.26 |
| TraesCS5A01G109500.1 | Wheat | nucleus | 13.63 | 24.42 |
| CDX89934 | Canola | cytosol | 0.32 | 1.53 |
Protein Annotations
| Gene3D:1.10.8.60 | Gene3D:2.60.200.20 | Gene3D:3.40.50.300 | MapMan:35.1 | InterPro:AAA+_ATPase | InterPro:ATPase_AAA_CS |
| InterPro:ATPase_AAA_core | ncoils:Coil | InterPro:FHA_dom | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005524 | InterPro:IPR000253 | InterPro:P-loop_NTPase | PFAM:PF00004 | PFAM:PF00498 |
| ScanProsite:PS00674 | PANTHER:PTHR23074 | PANTHER:PTHR23074:SF70 | SMART:SM00382 | InterPro:SMAD_FHA_dom_sf | SUPFAM:SSF49879 |
| SUPFAM:SSF52540 | EnsemblPlantsGene:TraesCS4A01G169300 | EnsemblPlants:TraesCS4A01G169300.15 | TIGR:cd00009 | TIGR:cd00060 | SEG:seg |
Description
No Description!
Coordinates
chr4A:-:425990926..426002440
Molecular Weight (calculated)
134482.0 Da
IEP (calculated)
6.953
GRAVY (calculated)
-0.436
Length
1233 amino acids
Sequence
(BLAST)
(BLAST)
0001: MVETRRSSAA KRPSSTSPPP GSPSAPPPKR PKAEPPASPT SSAPGRAEED SEAAAATRSA GLADDDLTPA IKDQGGDKRA AAAAESSRRR KETPPQQHAA
0101: PWAKLLSQCS QSPHLPVSVP QFSVGQSKRC NLLLKDQSVS KILCKLRHVE QGGPCELEVI GDKGVVLLNG RAVNPGMKVP LTGGDEVVFS SCGKHAYIFQ
0201: HPLNDKVAKA VTSSAVGLLE PPVAGVKHIH MENRTEVTST VAGTEMLASV SSQSKDLAAV PPASAEENQR VVQPIISSAS DKSKGHCISP DKECENGENT
0301: NEANSNIEDS PMDVVATPIS PDAVANDTSR QNGFGSDAHL DEIGKIATYK IRPVLRMIAG STVSEFDLTG DLFKALEDQR DLIRDLNTSA SLPPSRCQAF
0401: KDAMKQGIIS PSDIEVTFEN FPYYLSENTK NVLLSCSFLH LEKKEFIKQF SEISSINQRI LLSGPSGSEI YQETLIKALA KDFGARLLVV DSLLLPGVPS
0501: KDPETQKDVG KADKSGDKGG GEKLTILHKH RSSLADTMHF RRPAAPTSSV NADIVGTSTL HSATLPKQES STATSKGYTF REGSLAWERV RYVGPAQPPS
0601: GIHRGPSYGY RGRVMLAFEE NGSSKIGVRF DKQIPDGNDL GGLCEEDHGF FCSAELLRPD FSGSEEVERL AMTELIEVIS EESKIGSLIV LLKDVEKSFT
0701: GITESFSSLR SKLELLPPGV LIIGSHTQMD SRKEKAHPGG FLFTKFASSS QTLFDLFPDS FGSRLHERNK ESPKAMKHLN KLFPNKISIQ LPQDEALLTS
0801: WKQQLDRDVE TLKAKSNIGS IRSFLNRSAI ECNDLEELFI KDQSLTNENV DKIVGYAVSY HLKHNKVKTS KDGKLIITSG SLKHGLDMLQ SIHSDNKSSK
0901: KSLKDVATEN EFEKRLLADV IPPNDIGVTF DDIGALENVK ETLKELVMLP LQRPELFCKG QLTKPCKGIL LFGPPGTGKT MLAKAVATEA GANFINISMS
1001: SITSKWFGEG EKYVKAVFSL ASKISPSVIF IDEVDSMLGR RENPGEHEAM RKMKNEFMVN WDGLRTKDKE RVLVLGATNR PFDLDEAVIR RFPRRLMVNL
1101: PDASNREKIL KVILAKEELG QDTDLASLAN MTDGYSGSDL KNLCVTAAHY PIREILEKEK KEKNVAKSEG RPEPALHGSE DVRPLSLDDF KSAHEQVCAS
1201: VSSDSANMNE LVQWNDLYGE GGSRKKKALS YFM
0101: PWAKLLSQCS QSPHLPVSVP QFSVGQSKRC NLLLKDQSVS KILCKLRHVE QGGPCELEVI GDKGVVLLNG RAVNPGMKVP LTGGDEVVFS SCGKHAYIFQ
0201: HPLNDKVAKA VTSSAVGLLE PPVAGVKHIH MENRTEVTST VAGTEMLASV SSQSKDLAAV PPASAEENQR VVQPIISSAS DKSKGHCISP DKECENGENT
0301: NEANSNIEDS PMDVVATPIS PDAVANDTSR QNGFGSDAHL DEIGKIATYK IRPVLRMIAG STVSEFDLTG DLFKALEDQR DLIRDLNTSA SLPPSRCQAF
0401: KDAMKQGIIS PSDIEVTFEN FPYYLSENTK NVLLSCSFLH LEKKEFIKQF SEISSINQRI LLSGPSGSEI YQETLIKALA KDFGARLLVV DSLLLPGVPS
0501: KDPETQKDVG KADKSGDKGG GEKLTILHKH RSSLADTMHF RRPAAPTSSV NADIVGTSTL HSATLPKQES STATSKGYTF REGSLAWERV RYVGPAQPPS
0601: GIHRGPSYGY RGRVMLAFEE NGSSKIGVRF DKQIPDGNDL GGLCEEDHGF FCSAELLRPD FSGSEEVERL AMTELIEVIS EESKIGSLIV LLKDVEKSFT
0701: GITESFSSLR SKLELLPPGV LIIGSHTQMD SRKEKAHPGG FLFTKFASSS QTLFDLFPDS FGSRLHERNK ESPKAMKHLN KLFPNKISIQ LPQDEALLTS
0801: WKQQLDRDVE TLKAKSNIGS IRSFLNRSAI ECNDLEELFI KDQSLTNENV DKIVGYAVSY HLKHNKVKTS KDGKLIITSG SLKHGLDMLQ SIHSDNKSSK
0901: KSLKDVATEN EFEKRLLADV IPPNDIGVTF DDIGALENVK ETLKELVMLP LQRPELFCKG QLTKPCKGIL LFGPPGTGKT MLAKAVATEA GANFINISMS
1001: SITSKWFGEG EKYVKAVFSL ASKISPSVIF IDEVDSMLGR RENPGEHEAM RKMKNEFMVN WDGLRTKDKE RVLVLGATNR PFDLDEAVIR RFPRRLMVNL
1101: PDASNREKIL KVILAKEELG QDTDLASLAN MTDGYSGSDL KNLCVTAAHY PIREILEKEK KEKNVAKSEG RPEPALHGSE DVRPLSLDDF KSAHEQVCAS
1201: VSSDSANMNE LVQWNDLYGE GGSRKKKALS YFM
0001: MVDTRRSSSA SKRFCAATSS SSRPTKRSKA AAEPASSSSA SEVPIDNQAP VSDPGSISGD PELRTSDPQS NDAERPVTTT DVPAMETDTN PELEGLVTPT
0101: PAGEVVVEAE KSKSSKKRIA KAPWAKLLSQ FPQNPHLVMR GSVFTVGRRA CDLCIRDHSM PNVLCELRQS EHGGPSVASL EIIGNGVLVQ VNGKIYQRST
0201: CVHLRGGDEI IFTTPGKHAY IFQPLKDENL AAPDRTSSLS LFEAQSAPLK GLHVETRARD SSSVDGTASL LASISKLQNV PFLPPTAKSV KRQQNSEVPV
0301: LPSSCDDFIL DVDLNDADSN NDHAAIASME KTVASTSCAA NDDHDADGNG MDPFQEPEAG NIPDPAYEIR PILSLLGDPS EFDLRGSISK ILVDERREVR
0401: EMPKEYERPS ASVLTRRQAH KDSLRGGILN PQDIEVSFEN FPYFLSGTTK DVLMISTYAH IKYGKEYAEY ASDLPTACPR ILLSGPSGSE IYQEMLAKAL
0501: AKQCGAKLMI VDSLLLPGGS TPKEADTTKE SSRRERLSVL AKRAVQAAQA AVLQHKKPIS SVEAGITGGS TLSSQAVRRQ EVSTATSKSY TFKAGDRVRF
0601: LGPSTSSLAS LRAPPRGPAT GFQGKVLLAF EGNGSSKIGV RFDRSIPDGN DLGGLCEEDH GFFCTASSLR LESSSSDDAD KLAINEIFEV AFNESERGSL
0701: ILFLKDIEKS VSGNTDVYIT LKSKLENLPE NIVVIASQTQ LDNRKEKSHP GGFLFTKFGS NQTALLDLAF PDTFGGRLQD RNTEMPKAVK QITRLFPNKV
0801: TIQLPEDEAS LVDWKDKLER DTEILKAQAN ITSIRAVLSK NQLVCPDIEI LCIKDQTLPS DSVEKVVGFA FNHHLMNCSE PTVKDNKLII SAESITYGLQ
0901: LLHEIQNENK STKKSLKDVV TENEFEKKLL SDVIPPSDIG VSFSDIGALE NVKDTLKELV MLPLQRPELF GKGQLTKPTK GILLFGPPGT GKTMLAKAVA
1001: TEAGANFINI SMSSITSKWF GEGEKYVKAV FSLASKIAPS VIFVDEVDSM LGRRENPGEH EAMRKMKNEF MINWDGLRTK DKERVLVLAA TNRPFDLDEA
1101: VIRRLPRRLM VNLPDSANRS KILSVILAKE EMAEDVDLEA IANMTDGYSG SDLKNLCVTA AHLPIREILE KEKKERSVAQ AENRAMPQLY SSTDVRPLNM
1201: NDFKTAHDQV CASVASDSSN MNELQQWNEL YGEGGSRKKT SLSYFM
0101: PAGEVVVEAE KSKSSKKRIA KAPWAKLLSQ FPQNPHLVMR GSVFTVGRRA CDLCIRDHSM PNVLCELRQS EHGGPSVASL EIIGNGVLVQ VNGKIYQRST
0201: CVHLRGGDEI IFTTPGKHAY IFQPLKDENL AAPDRTSSLS LFEAQSAPLK GLHVETRARD SSSVDGTASL LASISKLQNV PFLPPTAKSV KRQQNSEVPV
0301: LPSSCDDFIL DVDLNDADSN NDHAAIASME KTVASTSCAA NDDHDADGNG MDPFQEPEAG NIPDPAYEIR PILSLLGDPS EFDLRGSISK ILVDERREVR
0401: EMPKEYERPS ASVLTRRQAH KDSLRGGILN PQDIEVSFEN FPYFLSGTTK DVLMISTYAH IKYGKEYAEY ASDLPTACPR ILLSGPSGSE IYQEMLAKAL
0501: AKQCGAKLMI VDSLLLPGGS TPKEADTTKE SSRRERLSVL AKRAVQAAQA AVLQHKKPIS SVEAGITGGS TLSSQAVRRQ EVSTATSKSY TFKAGDRVRF
0601: LGPSTSSLAS LRAPPRGPAT GFQGKVLLAF EGNGSSKIGV RFDRSIPDGN DLGGLCEEDH GFFCTASSLR LESSSSDDAD KLAINEIFEV AFNESERGSL
0701: ILFLKDIEKS VSGNTDVYIT LKSKLENLPE NIVVIASQTQ LDNRKEKSHP GGFLFTKFGS NQTALLDLAF PDTFGGRLQD RNTEMPKAVK QITRLFPNKV
0801: TIQLPEDEAS LVDWKDKLER DTEILKAQAN ITSIRAVLSK NQLVCPDIEI LCIKDQTLPS DSVEKVVGFA FNHHLMNCSE PTVKDNKLII SAESITYGLQ
0901: LLHEIQNENK STKKSLKDVV TENEFEKKLL SDVIPPSDIG VSFSDIGALE NVKDTLKELV MLPLQRPELF GKGQLTKPTK GILLFGPPGT GKTMLAKAVA
1001: TEAGANFINI SMSSITSKWF GEGEKYVKAV FSLASKIAPS VIFVDEVDSM LGRRENPGEH EAMRKMKNEF MINWDGLRTK DKERVLVLAA TNRPFDLDEA
1101: VIRRLPRRLM VNLPDSANRS KILSVILAKE EMAEDVDLEA IANMTDGYSG SDLKNLCVTA AHLPIREILE KEKKERSVAQ AENRAMPQLY SSTDVRPLNM
1201: NDFKTAHDQV CASVASDSSN MNELQQWNEL YGEGGSRKKT SLSYFM
Arabidopsis Description
AAA-type ATPase family protein [Source:UniProtKB/TrEMBL;Acc:F4HZ82]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.