Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 3
- mitochondrion 2
- cytosol 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH57222 | Soybean | cytosol | 44.74 | 86.76 |
| KRH63756 | Soybean | cytosol, plastid | 76.81 | 75.69 |
| KRH54195 | Soybean | plastid | 76.4 | 75.04 |
| KRH03951 | Soybean | nucleus | 75.08 | 74.59 |
| Solyc03g110900.2.1 | Tomato | nucleus | 72.2 | 73.47 |
| Solyc06g071980.2.1 | Tomato | cytosol | 44.57 | 71.32 |
| Solyc06g072000.1.1 | Tomato | plastid | 50.66 | 59.98 |
| CDX92656 | Canola | cytosol | 20.39 | 57.54 |
| AT1G62130.1 | Thale cress | cytosol, plastid | 47.2 | 55.03 |
| VIT_07s0005g00200.t01 | Wine grape | plastid | 57.65 | 54.47 |
| AT4G24860.1 | Thale cress | cytosol, plastid | 48.77 | 52.85 |
| VIT_02s0025g00650.t01 | Wine grape | endoplasmic reticulum, vacuole | 28.37 | 41.27 |
| VIT_16s0050g01850.t01 | Wine grape | endoplasmic reticulum, vacuole | 28.37 | 41.22 |
| VIT_16s0050g01830.t01 | Wine grape | endoplasmic reticulum, vacuole | 26.48 | 41.18 |
| VIT_16s0050g01840.t01 | Wine grape | cytosol, golgi, plasma membrane | 26.56 | 40.22 |
| VIT_10s0003g03500.t01 | Wine grape | cytosol | 11.51 | 35.26 |
| VIT_01s0011g02220.t01 | Wine grape | cytosol, mitochondrion, plastid | 27.47 | 33.4 |
| VIT_15s0048g01720.t01 | Wine grape | cytosol | 12.83 | 31.77 |
| VIT_09s0002g05260.t01 | Wine grape | cytosol | 12.34 | 28.79 |
| VIT_13s0106g00490.t01 | Wine grape | cytosol | 10.2 | 28.57 |
| VIT_06s0080g00160.t01 | Wine grape | extracellular | 10.12 | 28.41 |
| VIT_14s0068g02130.t01 | Wine grape | nucleus | 14.8 | 26.95 |
| VIT_16s0098g01260.t01 | Wine grape | endoplasmic reticulum | 13.49 | 21.24 |
Protein Annotations
| Gene3D:1.10.8.60 | EntrezGene:100266414 | Gene3D:2.60.200.20 | Gene3D:3.40.50.300 | MapMan:35.1 | InterPro:AAA+_ATPase |
| EMBL:AM441203 | InterPro:ATPase_AAA_CS | InterPro:ATPase_AAA_core | ProteinID:CAN71853 | ProteinID:CAN71853.1 | ProteinID:CBI15650 |
| ProteinID:CBI15650.3 | ncoils:Coil | UniProt:D7SGX0 | InterPro:FHA_dom | EMBL:FN594950 | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005524 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0016787 | GO:GO:0016887 | InterPro:IPR000253 |
| InterPro:P-loop_NTPase | PFAM:PF00004 | PFAM:PF00498 | ScanProsite:PS00674 | PANTHER:PTHR23074 | PANTHER:PTHR23074:SF84 |
| SMART:SM00382 | InterPro:SMAD_FHA_dom_sf | SUPFAM:SSF49879 | SUPFAM:SSF52540 | TIGR:TC69384 | TIGR:TC69510 |
| UniParc:UPI0001BE0EC1 | ArrayExpress:VIT_17s0000g01550 | EnsemblPlantsGene:VIT_17s0000g01550 | EnsemblPlants:VIT_17s0000g01550.t01 | RefSeq:XP_010663739.1 | SEG:seg |
Description
No Description!
Coordinates
chr17:+:1100451..1115869
Molecular Weight (calculated)
131590.0 Da
IEP (calculated)
6.419
GRAVY (calculated)
-0.336
Length
1216 amino acids
Sequence
(BLAST)
(BLAST)
0001: MVSTRRSGSL SGNTNKRSSP SEDKPPSPKR QKVDNSGAAS EKAAPAVDNS KEFCATASGA DPVECGSGDP PISGGASGEA VNSGKDEAAL AAPVSAPIAE
0101: GTSPIVVDKP RSSFSSWSVY QKQNYETSMP WCKLLSQFSQ NPNVSIGVIN FTIGSSRHCN FPLKDQTISP ILCKIKHSQR EGSAVAVLES SGSKGSVQVN
0201: GTFIKRGTSC VLNSGDEVVF GLLGNHAYIF QQLVTEVAIK APSSGATGAE VQSSVGKYLH VERRSGDPSA VAGASILASL SSLRQDLSRW KSPPLTTGKT
0301: QQGTELPPHP IIHDSPEVEF NGLEGNSTAN GGSDKAADIA AVSKNLSLDC NQDSGAEAGN VLEERNEWTR DSLPASTSGM SLRCAVFKED IHAGILDGKE
0401: IQVSFDDFPY YLSENTKNVL IAASFIHLKH REHAKFTSEL TTVNPRILLS GPAGSEIYQE MLAKALANYF GAKLLIFDSH SFLGGLSSKE AELLKDGSNA
0501: EKFCSCTKQS SGSTELAKNM ASSAGEADTP NIANAPISCE LESQPKLEND TVPSSSGTTK NHLFRIGDRV RFMGSASGGS YSAVSASRGP TFGIRGKVLL
0601: PFEDNPLSKI GVRFDKLITD GVDLGGLCEP GYGFFCNVND LRLENTGVED LDKLLINTLF EAVYSESRDS PFILFMKDAE KSIVGNSESY SMFKSRLEKL
0701: PDNVVIIGSH THTDNRKEKS HPGGLLFTKF GSNQTALLDL AFPDSFGRLH DRGKDVPKTT KLLTKLFPNK VTIHMPQDEA LLACWKHQLD RDSETLKMKG
0801: NLNHLRTVLT RSGMECDGLE KLCIKDQTLT NESAEKVVGW AVSHYLMSNP EADADTRLVL SSESIQYGIG ILQAIQNESK SLKKSLKDVV TENEFEKRLL
0901: ADVIPPSDIG VTFDDIGALE NVKDTLKELV MLPLQRPELF CKGQLTKPCK GILLFGPPGT GKTMLAKAVA TEAGANFINI SMSSITSKWF GEGEKYVKAV
1001: FSLASKIAPS VVFVDEVDSM LGRRENPGEH EAMRKMKNEF MVNWDGLRTK DTERVLVLAA TNRPFDLDEA VIRRLPRRLM VNLPDAPNRA KILKVILAKE
1101: DLSPDVDLDA VASMTDGYSG SDLKNLCVTA AHRPIREILE KEKKERAAAQ AEGRPPPALS GSADIRPLNI DDFKYAHERV CASVSSESVN MTELIQWNEL
1201: YGEGGSRRKK ALSYFM
0101: GTSPIVVDKP RSSFSSWSVY QKQNYETSMP WCKLLSQFSQ NPNVSIGVIN FTIGSSRHCN FPLKDQTISP ILCKIKHSQR EGSAVAVLES SGSKGSVQVN
0201: GTFIKRGTSC VLNSGDEVVF GLLGNHAYIF QQLVTEVAIK APSSGATGAE VQSSVGKYLH VERRSGDPSA VAGASILASL SSLRQDLSRW KSPPLTTGKT
0301: QQGTELPPHP IIHDSPEVEF NGLEGNSTAN GGSDKAADIA AVSKNLSLDC NQDSGAEAGN VLEERNEWTR DSLPASTSGM SLRCAVFKED IHAGILDGKE
0401: IQVSFDDFPY YLSENTKNVL IAASFIHLKH REHAKFTSEL TTVNPRILLS GPAGSEIYQE MLAKALANYF GAKLLIFDSH SFLGGLSSKE AELLKDGSNA
0501: EKFCSCTKQS SGSTELAKNM ASSAGEADTP NIANAPISCE LESQPKLEND TVPSSSGTTK NHLFRIGDRV RFMGSASGGS YSAVSASRGP TFGIRGKVLL
0601: PFEDNPLSKI GVRFDKLITD GVDLGGLCEP GYGFFCNVND LRLENTGVED LDKLLINTLF EAVYSESRDS PFILFMKDAE KSIVGNSESY SMFKSRLEKL
0701: PDNVVIIGSH THTDNRKEKS HPGGLLFTKF GSNQTALLDL AFPDSFGRLH DRGKDVPKTT KLLTKLFPNK VTIHMPQDEA LLACWKHQLD RDSETLKMKG
0801: NLNHLRTVLT RSGMECDGLE KLCIKDQTLT NESAEKVVGW AVSHYLMSNP EADADTRLVL SSESIQYGIG ILQAIQNESK SLKKSLKDVV TENEFEKRLL
0901: ADVIPPSDIG VTFDDIGALE NVKDTLKELV MLPLQRPELF CKGQLTKPCK GILLFGPPGT GKTMLAKAVA TEAGANFINI SMSSITSKWF GEGEKYVKAV
1001: FSLASKIAPS VVFVDEVDSM LGRRENPGEH EAMRKMKNEF MVNWDGLRTK DTERVLVLAA TNRPFDLDEA VIRRLPRRLM VNLPDAPNRA KILKVILAKE
1101: DLSPDVDLDA VASMTDGYSG SDLKNLCVTA AHRPIREILE KEKKERAAAQ AEGRPPPALS GSADIRPLNI DDFKYAHERV CASVSSESVN MTELIQWNEL
1201: YGEGGSRRKK ALSYFM
0001: MVETRRSSSA SKRFCASSSS PEASSSQRPN KRSKVKIDAA ASSLEPATAE PAGSSSASEV PIENQGPASD PGSESGEPEL GSSDPQAMDA EKPVVTTDVP
0101: VMENSPETDA NPEVEVLATP TVAGEAVADA DKSKAAKKRA LKAPWAKLLS QYSQNPHRVI RGPVFTVGRR GCDLSIRDQA MPSTLCELKQ SEHGGPSVAS
0201: LEILGNGVIV HVNGKCYQKS TCVHLRGGDE VIFSLNGKHA YIFQPVKDEN LAAPDRASSL SICEARGAPL KGVHVETRAG DVDGASDVDG ASILASLSKL
0301: RSFHLLPPIA KAGKRQQNPA VPVVPSSFND CISDTDMNDA DSNNDHAAVA SVEKIAAAST PGTANENLNV DGSGLDPFQE ADGGNVPAAG YEIRPIVHLL
0401: GESSSFDIRG SISRLLDERR EVKEFLREFD LSSTISTRRQ AFKDSLRGGV LNAQNIDISF ENFPYYLSAT TKGVLMISMY VHMNGGSKYA NFATDLTTAC
0501: PRILLSGPSG SEIYQEMLAK ALAKQFGAKL MIVDSLLLPG GSPAREAESS KEGSRRERLS MLAKRAVQAA QVLQHKKPTS SVDADITGGS TLSSQALPKQ
0601: EVSTATSKSY TFKAGDRVKF VGPSASAISS LQGQLRGPAI GSQGKVALAF EDNCASKIGI RFDRPVQDGN DLGGLCEEDH GFFCAASSLR LEGSSSDDAD
0701: KLAVNEIFEV ALSESEGGSL ILFLKDIEKS LVGNSDVYAT LKSKLETLPE NIVVIASQTQ LDSRKEKSHP GGFLFTKFGG NQTALLDLAF PDNFGKLHDR
0801: SKETPKSMKQ ITRLFPNKIA IQLPQEEALL SDWKEKLDRD TEILKVQANI TSILAVLAKN KLDCPDLGTL CIKDQTLPSE SVEKVVGWAF GHHLMICTEP
0901: IVKDNKLVIS AESISYGLQT LHDIQNENKS LKKSLKDVVT ENEFEKKLLS DVIPPSDIGV SFDDIGALEN VKETLKELVM LPLQRPELFD KGQLTKPTKG
1001: ILLFGPPGTG KTMLAKAVAT EAGANFINIS MSSITSKWFG EGEKYVKAVF SLASKIAPSV IFVDEVDSML GRRENPGEHE AMRKMKNEFM VNWDGLRTKD
1101: RERVLVLAAT NRPFDLDEAV IRRLPRRLMV NLPDATNRSK ILSVILAKEE IAPDVDLEAI ANMTDGYSGS DLKNLCVTAA HFPIREILEK EKKEKTAAQA
1201: ENRPTPPLYS CTDVRSLTMN DFKAAHDQVC ASVSSDSSNM NELQQWNELY GEGGSRKKTS LSYFM
0101: VMENSPETDA NPEVEVLATP TVAGEAVADA DKSKAAKKRA LKAPWAKLLS QYSQNPHRVI RGPVFTVGRR GCDLSIRDQA MPSTLCELKQ SEHGGPSVAS
0201: LEILGNGVIV HVNGKCYQKS TCVHLRGGDE VIFSLNGKHA YIFQPVKDEN LAAPDRASSL SICEARGAPL KGVHVETRAG DVDGASDVDG ASILASLSKL
0301: RSFHLLPPIA KAGKRQQNPA VPVVPSSFND CISDTDMNDA DSNNDHAAVA SVEKIAAAST PGTANENLNV DGSGLDPFQE ADGGNVPAAG YEIRPIVHLL
0401: GESSSFDIRG SISRLLDERR EVKEFLREFD LSSTISTRRQ AFKDSLRGGV LNAQNIDISF ENFPYYLSAT TKGVLMISMY VHMNGGSKYA NFATDLTTAC
0501: PRILLSGPSG SEIYQEMLAK ALAKQFGAKL MIVDSLLLPG GSPAREAESS KEGSRRERLS MLAKRAVQAA QVLQHKKPTS SVDADITGGS TLSSQALPKQ
0601: EVSTATSKSY TFKAGDRVKF VGPSASAISS LQGQLRGPAI GSQGKVALAF EDNCASKIGI RFDRPVQDGN DLGGLCEEDH GFFCAASSLR LEGSSSDDAD
0701: KLAVNEIFEV ALSESEGGSL ILFLKDIEKS LVGNSDVYAT LKSKLETLPE NIVVIASQTQ LDSRKEKSHP GGFLFTKFGG NQTALLDLAF PDNFGKLHDR
0801: SKETPKSMKQ ITRLFPNKIA IQLPQEEALL SDWKEKLDRD TEILKVQANI TSILAVLAKN KLDCPDLGTL CIKDQTLPSE SVEKVVGWAF GHHLMICTEP
0901: IVKDNKLVIS AESISYGLQT LHDIQNENKS LKKSLKDVVT ENEFEKKLLS DVIPPSDIGV SFDDIGALEN VKETLKELVM LPLQRPELFD KGQLTKPTKG
1001: ILLFGPPGTG KTMLAKAVAT EAGANFINIS MSSITSKWFG EGEKYVKAVF SLASKIAPSV IFVDEVDSML GRRENPGEHE AMRKMKNEFM VNWDGLRTKD
1101: RERVLVLAAT NRPFDLDEAV IRRLPRRLMV NLPDATNRSK ILSVILAKEE IAPDVDLEAI ANMTDGYSGS DLKNLCVTAA HFPIREILEK EKKEKTAAQA
1201: ENRPTPPLYS CTDVRSLTMN DFKAAHDQVC ASVSSDSSNM NELQQWNELY GEGGSRKKTS LSYFM
Arabidopsis Description
AAA-type ATPase family protein [Source:UniProtKB/TrEMBL;Acc:Q0WM93]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.