Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, vacuole
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- extracellular 4
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 4
- golgi 4
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_16s0050g01850.t01 | Wine grape | endoplasmic reticulum, vacuole | 85.42 | 79.81 |
| VIT_16s0050g01840.t01 | Wine grape | cytosol, golgi, plasma membrane | 79.28 | 77.21 |
| VIT_02s0025g00650.t01 | Wine grape | endoplasmic reticulum, vacuole | 72.12 | 67.46 |
| KRH35220 | Soybean | endoplasmic reticulum | 64.19 | 62.05 |
| KRG91604 | Soybean | endoplasmic reticulum, plasma membrane | 63.68 | 60.73 |
| VIT_10s0003g03500.t01 | Wine grape | cytosol | 16.11 | 31.74 |
| VIT_15s0048g01720.t01 | Wine grape | cytosol | 19.18 | 30.55 |
| VIT_13s0106g00490.t01 | Wine grape | cytosol | 15.6 | 28.11 |
| VIT_06s0080g00160.t01 | Wine grape | extracellular | 15.47 | 27.94 |
| VIT_01s0011g02220.t01 | Wine grape | cytosol, mitochondrion, plastid | 34.53 | 27.0 |
| VIT_09s0002g05260.t01 | Wine grape | cytosol | 17.65 | 26.49 |
| VIT_17s0000g01550.t01 | Wine grape | cytosol, plastid | 41.18 | 26.48 |
| VIT_07s0005g00200.t01 | Wine grape | plastid | 40.28 | 24.48 |
| VIT_14s0068g02130.t01 | Wine grape | nucleus | 20.84 | 24.4 |
| VIT_16s0098g01260.t01 | Wine grape | endoplasmic reticulum | 20.33 | 20.6 |
Protein Annotations
| Gene3D:1.10.8.60 | EntrezGene:100252698 | wikigene:100252698 | Gene3D:3.40.50.300 | MapMan:35.1 | InterPro:AAA+_ATPase |
| InterPro:ATPase_AAA_CS | InterPro:ATPase_AAA_core | ProteinID:CBI22605 | ProteinID:CBI22605.3 | ncoils:Coil | UniProt:E0CUQ5 |
| EMBL:FN595243 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005524 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0016787 | GO:GO:0016887 |
| EntrezGene:LOC100252698 | wikigene:LOC100252698 | InterPro:P-loop_NTPase | PFAM:PF00004 | ScanProsite:PS00674 | PANTHER:PTHR23074 |
| PANTHER:PTHR23074:SF98 | SMART:SM00382 | SUPFAM:SSF52540 | TMHMM:TMhelix | UniParc:UPI0001BE2049 | ArrayExpress:VIT_16s0050g01830 |
| EnsemblPlantsGene:VIT_16s0050g01830 | EnsemblPlants:VIT_16s0050g01830.t01 | RefSeq:XP_002275572 | RefSeq:XP_002275572.2 | SEG:seg | : |
Description
No Description!
Coordinates
chr16:-:18748860..18753944
Molecular Weight (calculated)
88058.9 Da
IEP (calculated)
7.018
GRAVY (calculated)
-0.392
Length
782 amino acids
Sequence
(BLAST)
(BLAST)
001: MEQKHILLSA LIVGVGVSVG LGLASGQTVC RWTGLKLWPD AITEEQIEHE LRRQVMDGRE SKITFDKFPY FLSKQTRVLL TSAAHFHLRQ SDFSKHTRNL
101: TPASRAILLS GPAELYQQTL AKALAHFFQA KLLLLDLNDF SLKMQSKYGS PKRESSSKKS ISEVTLGPMS GFLGSFSILL QSEEEETKGT LSRQSSGAHI
201: KSRCMNPPKH GSNASTPSNT KNTVASQRVT TSSAHFKRTS NWAFDEKQLL QSLYKVLDSV SETCPIILYL RDVEKLLLQS ERLYKLFQKM LGRLSGSVLI
301: LGSRMLDPDD EDEEMDERVS LLFPYNIEIK EPEDETCLDI WEAQLEKERE MIQFQENKNH IAEVLAANDI GCDNLGSICH ADSMILSDHI EEIVISALSY
401: HLMHNKNPEY RNGKLVISSK SLSHGLSIFK EDTRKTNAES SKLVPPYNEF ERRIRPEVIP ANQIGVAFED IGALDDIKES LQELVMLPLQ RPDLFKGGLL
501: KPCRGILLFG PPGNGKTMLA KAIANEAGAR FINVSMSTVT SKWFGEVEKN VRALFTLAAK ISPTIIFVDE ADSLLGQRTE VGEHYAMRQI KNEFMTHWDG
601: LLTKAGERVL VLAATNRPFD LDEAIIRRFE HRIMVGLPSV ESREMILKTL LAKEKAEDLD FKELATMTEG YTGSDLKNLC MTAAYRPVKE LLQQERLKED
701: KKKKQKADEG KSSEDASDTK EEAKGEKVIV LRPLNMEDMR QAKNQVAASF ASDEAVMNKL KQWNELYGDG GSRRKKQLTY FL
101: TPASRAILLS GPAELYQQTL AKALAHFFQA KLLLLDLNDF SLKMQSKYGS PKRESSSKKS ISEVTLGPMS GFLGSFSILL QSEEEETKGT LSRQSSGAHI
201: KSRCMNPPKH GSNASTPSNT KNTVASQRVT TSSAHFKRTS NWAFDEKQLL QSLYKVLDSV SETCPIILYL RDVEKLLLQS ERLYKLFQKM LGRLSGSVLI
301: LGSRMLDPDD EDEEMDERVS LLFPYNIEIK EPEDETCLDI WEAQLEKERE MIQFQENKNH IAEVLAANDI GCDNLGSICH ADSMILSDHI EEIVISALSY
401: HLMHNKNPEY RNGKLVISSK SLSHGLSIFK EDTRKTNAES SKLVPPYNEF ERRIRPEVIP ANQIGVAFED IGALDDIKES LQELVMLPLQ RPDLFKGGLL
501: KPCRGILLFG PPGNGKTMLA KAIANEAGAR FINVSMSTVT SKWFGEVEKN VRALFTLAAK ISPTIIFVDE ADSLLGQRTE VGEHYAMRQI KNEFMTHWDG
601: LLTKAGERVL VLAATNRPFD LDEAIIRRFE HRIMVGLPSV ESREMILKTL LAKEKAEDLD FKELATMTEG YTGSDLKNLC MTAAYRPVKE LLQQERLKED
701: KKKKQKADEG KSSEDASDTK EEAKGEKVIV LRPLNMEDMR QAKNQVAASF ASDEAVMNKL KQWNELYGDG GSRRKKQLTY FL
001: MEQKSVLLSA LGVGVGLGIG LASGQSLGRW ANGSGSVEDG LTGEQIEQEL IRQIVDGRES TVTFEEFPYF LSKRTRELLT SVAYVHLKEY DISKHTRNLA
101: PASKAILLSG PAEFYQQMLA KALSHYFESK LLLLDITDFS IKIQSKYGCT KREPFHKRSI SELTLDKVSS LMGSFSMLSQ REVEPRGTLR RHTSGNDLKS
201: RSTESSNRLP RHKRNASAAS DISSISSRSS SSVSASRKRT TNLCFDEKLF LQSLYKVLSS VSETTPLIIY LRDVEKLLES ERFYKLFQRL LNKLSGPVLI
301: LGSRVLEPED DCQEVDESIS ALFPYNIEIR PPEDESQLVS WKSRLEDDMK MIQFQDNKNH IAEVLAANDI QCDDLSSICH ADTMCLSNHI EEIVVSAITY
401: HLIHTKEPEY RNGKLVISSK SLSHGLSIFQ EGGNRSFEDS LKLDTNTDSK RKGGEVCSKS ESKSGPENKN ESEISLPSNK NDNPLPPKAP EVVPDNEFEK
501: RIRPEVIPAN EIGVTFADIG SLDETKDSLQ ELVMLPLRRP DLFQGGLLKP CRGILLFGPP GTGKTMLAKA IANEAGASFI NVSMSTITSK WFGEDEKNVR
601: ALFTLAAKVS PTIIFVDEVD SMLGQRTRVG EHEAMRKIKN EFMTHWDGLM TKPGERILVL AATNRPFDLD EAIIRRFERR IMVGLPSIES REKILRTLLS
701: KEKTENLDFH ELGQITEGYS GSDLKNLCIT AAYRPVRELI QQERLKDQER KKREEAGKGT EESKEEEAEA SEERVITLRP LNMEDMRKAK TQVAASFASE
801: GAGMNELKQW NDLYGEGGSR KKEQLTYFL
101: PASKAILLSG PAEFYQQMLA KALSHYFESK LLLLDITDFS IKIQSKYGCT KREPFHKRSI SELTLDKVSS LMGSFSMLSQ REVEPRGTLR RHTSGNDLKS
201: RSTESSNRLP RHKRNASAAS DISSISSRSS SSVSASRKRT TNLCFDEKLF LQSLYKVLSS VSETTPLIIY LRDVEKLLES ERFYKLFQRL LNKLSGPVLI
301: LGSRVLEPED DCQEVDESIS ALFPYNIEIR PPEDESQLVS WKSRLEDDMK MIQFQDNKNH IAEVLAANDI QCDDLSSICH ADTMCLSNHI EEIVVSAITY
401: HLIHTKEPEY RNGKLVISSK SLSHGLSIFQ EGGNRSFEDS LKLDTNTDSK RKGGEVCSKS ESKSGPENKN ESEISLPSNK NDNPLPPKAP EVVPDNEFEK
501: RIRPEVIPAN EIGVTFADIG SLDETKDSLQ ELVMLPLRRP DLFQGGLLKP CRGILLFGPP GTGKTMLAKA IANEAGASFI NVSMSTITSK WFGEDEKNVR
601: ALFTLAAKVS PTIIFVDEVD SMLGQRTRVG EHEAMRKIKN EFMTHWDGLM TKPGERILVL AATNRPFDLD EAIIRRFERR IMVGLPSIES REKILRTLLS
701: KEKTENLDFH ELGQITEGYS GSDLKNLCIT AAYRPVRELI QQERLKDQER KKREEAGKGT EESKEEEAEA SEERVITLRP LNMEDMRKAK TQVAASFASE
801: GAGMNELKQW NDLYGEGGSR KKEQLTYFL
Arabidopsis Description
P-loop containing nucleoside triphosphate hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4KHN5]
SUBAcon: [extracellular,vacuole]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.