CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG94255	Soybean	nucleus	95.9	95.9
VIT_14s0068g02130.t01	Wine grape	nucleus	75.27	74.25
CDY28494	Canola	plastid	66.46	67.59
CDY34176	Canola	plastid	66.31	67.44
Bra032982.1-P	Field mustard	plastid	66.16	67.28
GSMUA_Achr6P27610_001	Banana	cytosol	66.16	66.56
PGSC0003DMT400052226	Potato	nucleus	67.22	66.32
Solyc02g094100.2.1	Tomato	nucleus	66.46	65.57
AT3G27120.1	Thale cress	nucleus	66.46	64.41
TraesCS5D01G123800.1	Wheat	nucleus	65.86	63.08
TraesCS5B01G110300.1	Wheat	nucleus	65.25	62.5
TraesCS5A01G109500.1	Wheat	nucleus	64.64	61.92
Zm00001d041083_P005	Maize	nucleus	63.43	61.65
KXG23422	Sorghum	nucleus	63.43	60.76
HORVU5Hr1G029910.10	Barley	cytosol, mitochondrion, nucleus	59.79	55.26
KRH08796	Soybean	cytosol	11.08	41.95
KRH23518	Soybean	cytosol	14.42	41.48
KRH58481	Soybean	cytosol	22.46	36.72
KRH00594	Soybean	cytosol, plastid	26.71	35.85
KRH42362	Soybean	cytosol, endoplasmic reticulum	22.0	35.8
Os12t0443800-01	Rice	nucleus	20.64	35.6
KRH40573	Soybean	cytosol, plastid	26.25	35.6
KRH26619	Soybean	nucleus	22.0	33.26
KRH30451	Soybean	cytosol	21.85	33.18
KRH25197	Soybean	cytosol	21.85	33.18
KRH09800	Soybean	cytosol	23.52	32.43
KRH08789	Soybean	cytosol	16.24	31.94
KRH44395	Soybean	cytosol	25.49	31.52
KRH47511	Soybean	cytosol	25.34	31.45
KRH22691	Soybean	cytosol	19.42	31.3
KRH53570	Soybean	endoplasmic reticulum, plasma membrane	17.91	30.1
KRH64362	Soybean	endoplasmic reticulum, plasma membrane	17.75	29.85
KRH15897	Soybean	endoplasmic reticulum	17.6	29.74
KRH57222	Soybean	cytosol	24.58	25.84
KRH38312	Soybean	endoplasmic reticulum	24.73	19.95
KRH08780	Soybean	extracellular, plasma membrane	24.58	19.83
KRH41256	Soybean	extracellular	25.64	19.81
KRH77598	Soybean	endoplasmic reticulum	24.89	19.55
KRH27876	Soybean	cytosol	24.89	19.55
KRH59989	Soybean	endoplasmic reticulum	24.43	19.17
KRH35220	Soybean	endoplasmic reticulum	22.61	18.42
KRG91604	Soybean	endoplasmic reticulum, plasma membrane	22.46	18.05
KRH24190	Soybean	mitochondrion	25.04	15.88
KRH29161	Soybean	cytosol, mitochondrion	24.89	15.8
KRH71559	Soybean	cytosol	26.1	15.55
KRH63756	Soybean	cytosol, plastid	27.47	14.67
KRH54195	Soybean	plastid	27.47	14.62
KRH03951	Soybean	nucleus	26.86	14.46
KRH71560	Soybean	nucleus	27.01	14.32
KRH31896	Soybean	nucleus	26.56	14.27
KRH31895	Soybean	nucleus	26.86	14.19

Protein Annotations

Gene3D:1.10.8.60	EntrezGene:100776024	MapMan:13.3.6.5.5.1	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	EMBL:ACUP02002879
InterPro:ATPase_AAA_CS	InterPro:ATPase_AAA_core	ncoils:Coil	EnsemblPlantsGene:GLYMA_05G077900	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006259	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0010569	GO:GO:0016787	GO:GO:0016887	UniProt:K7KP02	EnsemblPlants:KRH57680
ProteinID:KRH57680	ProteinID:KRH57680.1	InterPro:P-loop_NTPase	PFAM:PF00004	PFAM:PF09336	ScanProsite:PS00674
PANTHER:PTHR23074	PANTHER:PTHR23074:SF17	SMART:SM00382	SUPFAM:SSF52540	UniParc:UPI000233A0D9	InterPro:Vps4_C
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr5:+:10383588..10390437

Molecular Weight (calculated)

73303.3 Da

IEP (calculated)

8.881

GRAVY (calculated)

-0.600

Length

659 amino acids

Sequence
(BLAST)

001: MEEAKEKCWR MEVEEKLKRL QSLLFGAERA LENNDFSSAY ILALRLLGFL DVNSHSNVDE AFVQPIRRDA LAKLHFARQS LTPQSDRQAF EQAKKSPGRI
101: FGTTGDIDIE KIRNSKYFQA LVKQSKEKDE NQLVDHLGKQ DKAGSKASKQ MVQTKLPSMY GKRSLRTSNG SKSIFNMKNN SSEDCMSLDR PQSHASHTKG
201: PGFSSILQVE GEERAFGNTF STKRVHMENN SPRVGFVKSP SSKEDVNPDA CGNGFVTARA KLEMEAKQKR GVGGSPSASV SPQCDNNSAN RLYGGRSYGV
301: PRRGVRGNFV PPIKSNGNNA GNTSTRIAGK CDDSLDDSTK KCLEILCGPD GELPEKLRNL DPRLIEHVSN EIMDRDPNVR WDDIAGLEHA KKCVNEMVVY
401: PLQRPDIFMG CRSPGRGLLL FGPPGTGKTM IGKAIAGEAK ATFFYISASS LTSKWIGEGE KLVRALFGVA SCRQPAVIFV DEIDSLLSQR KSDGEHESSR
501: RLKTQFLIEM EGFDSGSEQI LLIGATNRPQ ELDEAARRRL TKRLYIPLPC SEARAWIIRN LLEKDGLFKL SCDEMDIICK FTEGYSGSDM KNLVKDASMG
601: PLREALSQGI EITKLKKEDM RPVTLQDFKN SLQEVRPSVS TNELGTYEQW NKQFGSLSL

Best Arabidopsis Sequence Match ( AT3G27120.1 )
(BLAST)

001: MCGSVVSDSE REFEFHFWGF GHLGKEEERI MAGKRSSPFS SPLLRPPPEF LNVKEEGETE TPCWRKEVDE NLKRLQSLLF GADKFLEKSD FSSAQILGLR
101: LLGFLDSRSV TDADRDFIGP IRREVASKID LALEGLVSDS DRKAFELANT APGAIFGSKG GFDVEKIKQS KYFGFHVSQS NGKGVKEMEE RHDTDKLIPK
201: APKSMMQAKL TSLYGNSIGK PDNQRKTSVN NQDRASDECV IVERSHGFGF GTKRPHAETS SLANDGEVKE DGAPNGFVSA KIKLEMDVRQ KRGSTESPSS
301: CLSPQSDKNA LGRGYGSRSG GLRRGYRSNF VPPVKTNGNN VGNLTSRIGG KTDDALDDST RTCLEMLCGP DGELPEKLRN LEPRLIEHVS NEIMDRDPNV
401: RWDDIAGLEH AKKCVTEMVI WPLLRPDIFK GCRSPGKGLL LFGPPGTGKT MIGKAIAGEA KATFFYISAS SLTSKWIGEG EKLVRALFGV ASCRQPAVIF
501: VDEIDSLLSQ RKSDGEHESS RRLKTQFLIE MEGFDSGSEQ ILLIGATNRP QELDEAARRR LTKRLYIPLP SSEARAWIIQ NLLKKDGLFT LSDDDMNIIC
601: NLTEGYSGSD MKNLVKDATM GPLREALKRG IDITNLTKDD MRLVTLQDFK DALQEVRPSV SQNELGIYEN WNNQFGSLSL

Arabidopsis Description

FIGL1ATPase family AAA domain-containing protein FIGL1 [Source:UniProtKB/Swiss-Prot;Acc:F4JEX5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.