Factsheet for Os01t0673500-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
plastid 2
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU87315	Sorghum	cytosol	88.29	89.83
TraesCS3B01G305600.2	Wheat	cytosol	85.85	89.11
TraesCS3A01G271900.1	Wheat	cytosol	85.85	88.0
TraesCS3D01G271500.1	Wheat	cytosol	85.12	87.25
Os01t0757400-02	Rice	cytosol	77.07	81.87
GSMUA_Achr10P...	Banana	cytosol	73.41	77.78
HORVU3Hr1G061800.1	Barley	cytosol, plastid	85.61	75.48
Solyc02g070440.2.1	Tomato	cytosol	70.73	75.13
PGSC0003DMT400054532	Potato	cytosol	70.49	74.48
KRH58481	Soybean	cytosol	72.93	74.19
VIT_10s0003g03500.t01	Wine grape	cytosol	71.46	73.8
KRH42362	Soybean	cytosol, endoplasmic reticulum	72.68	73.58
CDX84641	Canola	cytosol	66.34	72.53
CDY17260	Canola	cytosol	67.32	72.06
CDX79566	Canola	cytosol	65.85	71.81
CDX84306	Canola	cytosol	67.56	71.76
Bra005414.1-P	Field mustard	cytosol	67.8	70.92
AT2G34560.2	Thale cress	cytosol	66.59	69.47
Zm00001d011563_P019	Maize	mitochondrion	86.83	67.81
Bra022979.1-P	Field mustard	plastid	67.07	47.66
Os01t0141100-02	Rice	cytosol, plasma membrane	31.46	42.57
Os02t0749150-01	Rice	mitochondrion	24.39	37.31
Os11t0661400-01	Rice	cytosol	20.98	35.68
Os06t0225900-01	Rice	cytosol	29.76	33.24
Os02t0159900-01	Rice	plasma membrane	33.66	31.87
Os01t0683100-01	Rice	extracellular	39.51	31.21
Os06t0130000-02	Rice	cytosol	36.34	30.6
Os01t0141300-00	Rice	cytosol	35.37	30.33
Os06t0714500-01	Rice	plasma membrane	27.56	28.75
Os03t0344700-01	Rice	cytosol	33.41	17.68
Os01t0226400-01	Rice	plasma membrane	31.46	15.36
Os05t0584600-02	Rice	vacuole	31.71	15.2
Os01t0623500-01	Rice	cytosol	30.0	15.15
Os07t0672500-02	Rice	cytosol, plastid	32.68	12.4
Os12t0443800-01	Rice	nucleus	3.41	3.66

Protein Annotations

Gene3D:1.10.8.60	Gene3D:3.40.50.300	EntrezGene:4325904	MapMan:50.3.6	InterPro:AAA+_ATPase	InterPro:ATPase_AAA_core
ProteinID:BAD73312.1	ProteinID:BAD73365.1	ProteinID:BAF05747.1	ProteinID:BAS73629.1	ProteinID:BAS73630.1	ProteinID:EEE55161.1
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0016787	GO:GO:0016887	EnsemblPlantsGene:Os01g0673500
EnsemblPlants:Os01t0673500-01	InterPro:P-loop_NTPase	PFAM:PF00004	PANTHER:PTHR23074	PANTHER:PTHR23074:SF92	UniProt:Q5QMP6
SMART:SM00382	SUPFAM:SSF52540	UniParc:UPI000048DF1E	RefSeq:XP_015622246.1	SEG:seg	:

Description

Similar to predicted protein. (Os01t0673500-01);Similar to Katanin p60 ATPase-containing subunit A1 (EC 3.6.4.3) (Katanin p60 subunit A1) (p60 katanin). Splice isoform 2. (Os01t0673500-02);Similar to predicted protein. (Os01t0673500-03)

Coordinates

chr1:-:27660018..27666746

Molecular Weight (calculated)

45580.5 Da

IEP (calculated)

5.281

GRAVY (calculated)

-0.378

Length

410 amino acids

Sequence
(BLAST)

001: MTGADEPSIT RWTFEDFEVY YEVRLGIRRE PGGDEDGDGD GGGGRGYAPL GSGSAGSTRP SAAHANGGAD LAVFEQFERL ERKVELRNGA IEAGPPQKSL
101: LPSFESAEMR NLAETLLRDI IRGSPDVKWE SIKGLENAKR LLKEAVVMPI KYPKYFKGLL SPWKGILLFG PPGTGKTMLA KAVATECKTT FFNISASSIV
201: SKWRGDSEKL VKVLFELARH HAPSTIFLDE IDAIISQRGE ARSEHEASRR LKTELLIQMD GLTKTDDLVF VLAATNLPWE LDAAMLRRLE KRILVPLPEQ
301: EARHAMFEEL LPSVPGTMNI PYDVLVEKTE GYSGSDIRLV CKEAAMQPLR RLMSVLEGRQ EEVPEDELPE VGPVTTEDIE LALRNTRPSA HLHVHRYEKF
401: NQDYGSHVLS

Best Arabidopsis Sequence Match ( AT2G34560.2 )
(BLAST)

001: MATDEPSQTR WSFLEFKTFY DAKFGRKKLP EEDVSNKDQP EDGSSNGNNG DVNNNSSPVT NQDGNTALAN GNVIREKPKK SMFPPFESAE TRTLAESLSR
101: DIIRGNPNIK WESIKGLENA KKLLKEAVVM PIKYPTYFNG LLTPWKGILL FGPPGTGKTM LAKAVATECN TTFFNISASS VVSKWRGDSE KLIRVLFDLA
201: RHHAPSTIFL DEIDAIISQR GGEGRSEHEA SRRLKTELLI QMDGLQKTNE LVFVLAATNL PWELDAAMLR RLEKRILVPL PDPEARRGMF EMLIPSQPGD
301: EPLPHDVLVE KSEGYSGSDI RILCKEAAMQ PLRRTLAILE DREDVVPEDE LPKIGPILPE DIDRALSNTR PSAHLHAHLY DKFNDDYGSQ ILK

Arabidopsis Description

AT2G34560 protein [Source:UniProtKB/TrEMBL;Acc:B9DGC0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.