Factsheet for Bra012747.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
peroxisome 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome, plastid
BaCelLo:	cytosol
MultiLoc:	peroxisome
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX90550	Canola	cytosol	99.39	99.39
AT4G15960.1	Thale cress	mitochondrion	86.97	76.53
Bra012750.1-P	Field mustard	cytosol	62.42	63.19
KRH50813	Soybean	cytosol	40.91	62.5
VIT_05s0077g02020.t01	Wine grape	cytosol	60.0	62.46
VIT_05s0077g02010.t01	Wine grape	cytosol	59.7	62.15
PGSC0003DMT400029422	Potato	cytosol	60.61	61.54
KRH02278	Soybean	cytosol	65.15	60.73
VIT_05s0077g01990.t01	Wine grape	cytoskeleton, cytosol, peroxisome	58.18	60.57
PGSC0003DMT400011790	Potato	cytosol	58.79	60.06
Solyc12g099430.1.1	Tomato	cytosol	58.48	59.75
PGSC0003DMT400029420	Potato	cytosol	59.7	58.98
Solyc01g066450.2.1	Tomato	cytosol	59.39	58.51
Solyc01g066460.2.1	Tomato	cytosol, peroxisome	33.94	57.44
Solyc01g066470.2.1	Tomato	cytosol, peroxisome	33.94	57.44
PGSC0003DMT400060254	Potato	extracellular	55.76	57.32
Solyc05g054350.2.1	Tomato	plastid	55.45	57.01
Bra036276.1-P	Field mustard	cytosol	54.24	56.65
PGSC0003DMT400060250	Potato	cytosol	54.85	56.39
Solyc05g054320.2.1	Tomato	cytosol	54.85	56.39
Bra034309.1-P	Field mustard	peroxisome	53.94	55.8
Bra036275.1-P	Field mustard	cytosol	52.73	55.24
VIT_05s0077g02000.t01	Wine grape	cytosol, mitochondrion, peroxisome	31.21	53.93
Bra039422.1-P	Field mustard	cytosol	53.03	52.87
Bra038876.1-P	Field mustard	peroxisome	42.73	43.12
Bra012875.1-P	Field mustard	cytosol	40.91	42.06
Bra036841.1-P	Field mustard	peroxisome	39.39	40.75
VIT_05s0077g02030.t01	Wine grape	mitochondrion	11.21	39.36
Bra012876.1-P	Field mustard	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:Bra012747.1	EnsemblPlants:Bra012747.1-P	EnsemblPlantsGene:Bra012747	Gene3D:3.40.50.1820	GO:GO:0003674	GO:GO:0003824
InterPro:AB_hydrolase	InterPro:AB_hydrolase_1	InterPro:Epox_hydrolase-like	InterPro:IPR029058	PANTHER:PTHR43329	PANTHER:PTHR43329:SF13
PFAM:PF12697	PRINTS:PR00111	PRINTS:PR00412	SUPFAM:SSF53474	UniParc:UPI000254084F	UniProt:M4D8D7
MapMan:35.2	:	:	:	:	:

Description

AT4G15960 (E=7e-174) | catalytic/ epoxide hydrolase

Coordinates

chrA03:+:22456811..22458230

Molecular Weight (calculated)

37273.6 Da

IEP (calculated)

6.054

GRAVY (calculated)

-0.305

Length

330 amino acids

Sequence
(BLAST)

001: MSGLDGVEHK TLKVNGINMH VAELPGSGSG GEPIILFIHG FPELWYTWRH QMTALSSLGY RTIAPDLRGY GDTDAPEKME DYTYFNIVGD LVALIDAVTG
101: GDEAVFVVGH DWGAMIAWQL CMYRPEKVKA LVNMSVLFSP RSPDRVPIPT LRRFFGDDYY ICRFQKPGEI ELEFKKLGTE KVLKEFLTYK TPGPLYLPKG
201: KLFKSSENGG ASSALPPWLT QEDLDYYVTK YDNKGFTGPI NYYRNIDRNW ELTAPWTGAK IRVPVKFIVG DQDLTYNSPG AKEYINGGGF KKDVPLLDET
301: VVLKGVGHFL HEESPEEINQ HIHSFFQKFL

Best Arabidopsis Sequence Match ( AT4G15960.1 )
(BLAST)

001: MFFLCRKLSL SRFRHHFPLR LRRFLGENPN PTTHFSTLPD NQTKRPEKSR LDGVEHKTLK VNGINMHVAE KPGSGSGEDP IILFLHGFPE LWYTWRHQMV
101: ALSSLGYRTI APDLRGYGDT EAPEKVEDYT YLNVDGDVVA LIDAVTGGDK AVSVVGHDWG AMIAWQLCQY RPEKVKALVN MSVLFSPRNP VRVPVPTLRH
201: VFGDDYYVCR FQKAGEIETE FKKLGTENVL KEFLTYKTPG PLNLPKDKYF KRSENAASAL PLWLTQEDLD YYVTKYENKG FTGPINYYRN IDRNWELTAP
301: WTGAKIRVPV KFIIGDQDLT YNFPGAKEYI NGGGFKRDVP LLDETVVLKG LGHFLHEENP DVINQHIHNF FHKFL

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JKY6]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.