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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 3
  • cytosol 2
  • mitochondrion 1
  • extracellular 1
  • golgi 1
  • plasma membrane 1
  • endoplasmic reticulum 1
  • vacuole 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, secretory
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
TargetP:secretory
WoLF PSORT:cytosol
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra012747.1-P Field mustard cytosol 0.0 0.0
Bra012750.1-P Field mustard cytosol 0.0 0.0
Bra012875.1-P Field mustard cytosol 0.0 0.0
Bra034309.1-P Field mustard peroxisome 0.0 0.0
Bra036275.1-P Field mustard cytosol 0.0 0.0
Bra036276.1-P Field mustard cytosol 0.0 0.0
Bra036841.1-P Field mustard peroxisome 0.0 0.0
Bra038876.1-P Field mustard peroxisome 0.0 0.0
Bra039422.1-P Field mustard cytosol 0.0 0.0
Protein Annotations
EnsemblPlants:Bra012876.1EnsemblPlants:Bra012876.1-PEnsemblPlantsGene:Bra012876Gene3D:3.40.30.10InterPro:Phosducin_thioredoxin-like_domInterPro:Thioredoxin-like_sf
PANTHER:PTHR21148PANTHER:PTHR21148:SF40PFAM:PF02114SEG:segSUPFAM:SSF52833UniParc:UPI0002540669
UniProt:M4D8R6MapMan:20.1.2.3::::
Description
AT3G50960 (E=3e-100) PLP3a | PLP3a (Phosducin-like protein 3 homolog); beta-tubulin binding
Coordinates
chrA03:-:21825045..21826516
Molecular Weight (calculated)
26202.0 Da
IEP (calculated)
5.473
GRAVY (calculated)
-0.644
Length
230 amino acids
Sequence
(BLAST)
001: MDPDAVKSTL SNLAFGNVLA AAARDYKKEV LANEKAQSSN PVNEEVDLDE LMDDPELEKL HADRIAALKR EVEKREAFKR QGHGEYREVS EGDFLGEVTR
101: SQNVICHFYH KEFYRCKIMD KHLKTLAPRH VDTKFIRVDA ENAPFFVTKL AIKTLPCVLL FSKGVAIDRL VGFQDLGTKD DFTTTKLESV LIKKGMLSKK
201: KKEEDDEDAE YQESIRRSVR SSENLDSDSD
Best Arabidopsis Sequence Match ( AT3G50960.1 )
(BLAST)
001: MDPDAVKSTL SNLAFGNVMA AAARNYQKEV LANEKAQGSN PVNEEVDLDE LMDDPELERL HADRIAALKR EVEKRESFKR QGHGEYREVS EGDFLGEVTR
101: SEKVICHFYH KEFYRCKIMD KHLKTLAPRH VDTKFIKVDA ENAPFFVTKL AIKTLPCVVL FSKGVAMDRL VGFQDLGTKD DFTTNKLENV LLKKGMLSKK
201: KKEEDDEDAE YQESIRRSVR SSENLDSDSD
Arabidopsis Description
PLP3AThioredoxin domain-containing protein PLP3A [Source:UniProtKB/Swiss-Prot;Acc:Q6NPL9]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.