Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- plastid 2
- peroxisome 3
- cytosol 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDY48181 | Canola | peroxisome | 99.69 | 99.69 |
CDX77050 | Canola | peroxisome | 50.16 | 97.56 |
CDX77049 | Canola | peroxisome | 50.16 | 97.56 |
CDX77051 | Canola | cytosol | 48.28 | 93.9 |
AT2G26740.1 | Thale cress | cytosol | 82.45 | 81.93 |
AT2G26750.1 | Thale cress | cytosol | 79.62 | 79.38 |
HORVU3Hr1G070810.3 | Barley | cytosol, peroxisome | 18.81 | 58.25 |
TraesCS7D01G228900.1 | Wheat | cytosol | 54.55 | 56.49 |
TraesCS7D01G224000.1 | Wheat | unclear | 55.49 | 54.97 |
TraesCS3D01G180600.1 | Wheat | peroxisome | 55.17 | 54.66 |
TraesCS7A01G225600.1 | Wheat | cytosol | 55.17 | 54.66 |
TraesCS7B01G128800.1 | Wheat | cytosol | 55.17 | 54.66 |
TraesCS3B01G204900.1 | Wheat | peroxisome | 54.86 | 54.35 |
EES00506 | Sorghum | cytosol | 55.17 | 54.15 |
TraesCS3A01G175200.2 | Wheat | peroxisome | 54.55 | 54.04 |
TraesCS7B01G129100.1 | Wheat | cytosol | 54.55 | 54.04 |
Bra012747.1-P | Field mustard | cytosol | 55.8 | 53.94 |
TraesCS7A01G222400.1 | Wheat | cytosol | 51.1 | 53.8 |
TraesCS7B01G194000.1 | Wheat | cytosol | 54.23 | 53.56 |
TraesCS7B01G128900.1 | Wheat | unclear | 53.92 | 53.42 |
Bra012750.1-P | Field mustard | cytosol | 54.55 | 53.37 |
Bra039422.1-P | Field mustard | cytosol | 55.17 | 53.17 |
Bra036276.1-P | Field mustard | cytosol | 52.66 | 53.16 |
Bra036275.1-P | Field mustard | cytosol | 51.72 | 52.38 |
Os01t0255000-01 | Rice | cytosol | 52.66 | 52.17 |
Os05t0273800-01 | Rice | cytosol, peroxisome, plastid | 53.92 | 51.96 |
Os01t0255100-01 | Rice | cytosol | 52.04 | 51.23 |
HORVU7Hr1G045640.2 | Barley | plastid | 55.8 | 50.57 |
Zm00001d040290_P001 | Maize | peroxisome | 56.11 | 50.28 |
TraesCS7D01G224200.1 | Wheat | golgi, unclear | 54.86 | 49.86 |
TraesCS7A01G222600.1 | Wheat | golgi, unclear | 54.86 | 49.72 |
EES17023 | Sorghum | extracellular, plastid, vacuole | 53.92 | 45.99 |
HORVU3Hr1G070830.1 | Barley | cytosol, peroxisome | 24.14 | 44.25 |
HORVU7Hr1G045620.2 | Barley | cytosol, mitochondrion, peroxisome | 21.32 | 44.16 |
Bra038876.1-P | Field mustard | peroxisome | 44.51 | 43.43 |
Zm00001d023651_P001 | Maize | extracellular | 53.6 | 43.07 |
HORVU3Hr1G035400.1 | Barley | plastid | 54.55 | 42.96 |
Bra012875.1-P | Field mustard | cytosol | 42.63 | 42.37 |
Bra036841.1-P | Field mustard | peroxisome | 40.75 | 40.75 |
GSMUA_Achr3P24120_001 | Banana | cytosol | 59.87 | 30.13 |
Bra012876.1-P | Field mustard | cytosol | 0.0 | 0.0 |
Protein Annotations
EnsemblPlants:Bra034309.1 | EnsemblPlants:Bra034309.1-P | EnsemblPlantsGene:Bra034309 | Gene3D:3.40.50.1820 | GO:GO:0003674 | GO:GO:0003824 |
InterPro:AB_hydrolase | InterPro:AB_hydrolase_1 | InterPro:Epox_hydrolase-like | InterPro:IPR029058 | PANTHER:PTHR43329 | PANTHER:PTHR43329:SF13 |
PFAM:PF00561 | PRINTS:PR00111 | PRINTS:PR00412 | SUPFAM:SSF53474 | UniParc:UPI00025452BE | UniProt:M4EZR6 |
MapMan:35.2 | : | : | : | : | : |
Description
AT2G26740 (E=3e-161) ATSEH | ATSEH (Arabidopsis thaliana soluble epoxide hydrolase); epoxide hydrolase
Coordinates
chrA04:-:11815577..11817633
Molecular Weight (calculated)
36169.5 Da
IEP (calculated)
5.412
GRAVY (calculated)
-0.110
Length
319 amino acids
Sequence
(BLAST)
(BLAST)
001: MEHRKLRGNG VDIHVAIQGP SDGPVVLLIH GFPTLWYSWR HQIPGLAALG YRAVAPDLRG YGDSDAPPEI SSYTCFHMVG DMIAVISALT EDKVFVVGHD
101: WGALIAWYLC LFRPDKVKAL VNLSVPFSLG GPIDPTVKPL DVLRKFYGDD FYMCRFQEVG EIEAEISEVG VERVVRRILT YRTPRPLILP KDKSFWGPKD
201: ETIPLPSWLT EEDVAYYVSK FEEKGYTGGV NYYRNFDRNN ELLAPWVGCK IQVPTKFAIG EQDLVYHFPG AREYIHGPKF KEDVPLLEEP VVIEGAAHFV
301: NQEKPQEILQ LIVDFISKF
101: WGALIAWYLC LFRPDKVKAL VNLSVPFSLG GPIDPTVKPL DVLRKFYGDD FYMCRFQEVG EIEAEISEVG VERVVRRILT YRTPRPLILP KDKSFWGPKD
201: ETIPLPSWLT EEDVAYYVSK FEEKGYTGGV NYYRNFDRNN ELLAPWVGCK IQVPTKFAIG EQDLVYHFPG AREYIHGPKF KEDVPLLEEP VVIEGAAHFV
301: NQEKPQEILQ LIVDFISKF
001: MEHRKVRGNG IDIHVAIQGP SDGPIVLLLH GFPELWYSWR HQIPGLAARG YRAVAPDLRG YGDSDAPAEI SSYTCFNIVG DLIAVISALT ASEDEKVFVV
101: GHDWGALIAW YLCLFRPDRV KALVNLSVPF SFRPTDPSVK PVDRMRAFYG DDYYICRFQE FGDVEAEIAE VGTERVMKRL LTYRTPGPVI IPKDKSFWGS
201: KGETIPLPSW LTEEDVAYFV SKFEEKGFSG PVNYYRNFNR NNELLGPWVG SKIQVPTKFV IGELDLVYYM PGVKEYIHGP QFKEDVPLLE EPVVMEGVAH
301: FINQEKPQEI LQIILDFISK F
101: GHDWGALIAW YLCLFRPDRV KALVNLSVPF SFRPTDPSVK PVDRMRAFYG DDYYICRFQE FGDVEAEIAE VGTERVMKRL LTYRTPGPVI IPKDKSFWGS
201: KGETIPLPSW LTEEDVAYFV SKFEEKGFSG PVNYYRNFNR NNELLGPWVG SKIQVPTKFV IGELDLVYYM PGVKEYIHGP QFKEDVPLLE EPVVMEGVAH
301: FINQEKPQEI LQIILDFISK F
Arabidopsis Description
ATSEHATsEH [Source:UniProtKB/TrEMBL;Acc:Q42566]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.