Factsheet for TraesCS3A01G175200.2

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

peroxisome 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, mitochondrion, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	peroxisome
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G180600.1	Wheat	peroxisome	97.52	97.52
TraesCS3B01G204900.1	Wheat	peroxisome	96.89	96.89
EES00506	Sorghum	cytosol	83.23	82.46
Os01t0255100-01	Rice	cytosol	77.33	76.85
Os01t0255000-01	Rice	cytosol	75.47	75.47
HORVU3Hr1G035400.1	Barley	plastid	94.41	75.06
Zm00001d040290_P001	Maize	peroxisome	82.92	75.0
CDX77051	Canola	cytosol	30.12	59.15
TraesCS7A01G222400.1	Wheat	cytosol	54.04	57.43
Solyc06g009170.2.1	Tomato	extracellular	56.52	57.23
PGSC0003DMT400046206	Potato	peroxisome	56.52	57.23
KRG96457	Soybean	nucleus	56.21	57.1
TraesCS7A01G225600.1	Wheat	cytosol	56.83	56.83
VIT_07s0005g00700.t01	Wine grape	cytosol	55.9	56.78
VIT_05s0077g02010.t01	Wine grape	cytosol	55.9	56.78
PGSC0003DMT400063718	Potato	cytosol	55.28	56.69
KRH68486	Soybean	cytosol	55.59	56.65
PGSC0003DMT400060254	Potato	extracellular	55.9	56.07
Solyc01g099910.2.1	Tomato	cytosol	54.35	55.73
Solyc05g054320.2.1	Tomato	cytosol	54.97	55.14
KRG96773	Soybean	nucleus	53.73	54.75
VIT_05s0077g01990.t01	Wine grape	cytoskeleton, cytosol, peroxisome	53.73	54.57
Bra034309.1-P	Field mustard	peroxisome	54.04	54.55
VIT_14s0060g01940.t01	Wine grape	cytosol	53.42	54.26
CDY48181	Canola	peroxisome	53.73	54.23
Solyc05g054350.2.1	Tomato	plastid	54.04	54.21
KRG96774	Soybean	nucleus	53.42	54.09
VIT_05s0077g02020.t01	Wine grape	cytosol	53.11	53.94
PGSC0003DMT400060250	Potato	cytosol	53.73	53.89
AT2G26740.1	Thale cress	cytosol	53.73	53.89
PGSC0003DMT400081311	Potato	cytosol	53.11	53.77
KRG96771	Soybean	nucleus	56.83	53.67
TraesCS4A01G366100.1	Wheat	peroxisome	55.59	53.43
AT2G26750.1	Thale cress	cytosol	52.48	52.81
KRG92916	Soybean	nucleus	52.8	52.8
KRH50813	Soybean	cytosol	35.4	52.78
PGSC0003DMT400011790	Potato	cytosol	52.8	52.63
PGSC0003DMT400029422	Potato	cytosol	53.11	52.62
Solyc09g075300.2.1	Tomato	cytosol	51.86	52.52
KRH68487	Soybean	cytosol	51.86	52.52
TraesCS7A01G222600.1	Wheat	golgi, unclear	56.83	51.99
KRH02278	Soybean	cytosol	57.14	51.98
Solyc12g099430.1.1	Tomato	cytosol	51.86	51.7
KRG96772	Soybean	nucleus	53.42	51.04
TraesCS3A01G255200.1	Wheat	peroxisome	50.31	50.78
PGSC0003DMT400029420	Potato	cytosol	52.48	50.6
KRH68206	Soybean	peroxisome	47.2	50.33
VIT_05s0077g02000.t01	Wine grape	cytosol, mitochondrion, peroxisome	29.81	50.26
Solyc01g066450.2.1	Tomato	cytosol	51.24	49.25
TraesCS4A01G366000.1	Wheat	peroxisome	52.48	49.13
TraesCS3A01G538800.2	Wheat	cytosol	39.44	48.85
Solyc01g066460.2.1	Tomato	cytosol, peroxisome	29.5	48.72
TraesCS5A01G053600.1	Wheat	cytosol	50.31	48.21
Solyc01g066470.2.1	Tomato	cytosol, peroxisome	29.19	48.21
TraesCS6A01G029300.1	Wheat	cytosol	48.14	47.4
CDX77050	Canola	peroxisome	23.91	46.95
CDX77049	Canola	peroxisome	23.91	46.95
TraesCS3A01G536800.1	Wheat	cytosol	46.89	46.18
VIT_05s0077g02030.t01	Wine grape	mitochondrion	13.04	44.68
TraesCS1A01G170700.1	Wheat	cytosol, peroxisome, plastid	31.37	32.48
TraesCS1A01G170600.1	Wheat	cytosol	31.37	31.96
TraesCS2A01G526600.1	Wheat	plastid	15.22	21.21

Protein Annotations

EnsemblPlants:TraesCS3A01G175200.2	EnsemblPlantsGene:TraesCS3A01G175200	Gene3D:3.40.50.1820	GO:GO:0003674	GO:GO:0003824	InterPro:AB_hydrolase
InterPro:AB_hydrolase_1	InterPro:Epox_hydrolase-like	InterPro:IPR029058	PANTHER:PTHR43329	PANTHER:PTHR43329:SF14	PFAM:PF12697
PRINTS:PR00412	SUPFAM:SSF53474	MapMan:35.2	:	:	:

Description

No Description!

Coordinates

chr3A:+:195171785..195183276

Molecular Weight (calculated)

35801.8 Da

IEP (calculated)

5.359

GRAVY (calculated)

-0.078

Length

322 amino acids

Sequence
(BLAST)

001: MEPEGVRHRM VEVAKGVRLH VAEVGPENGP VVLLVHGFPD LWYGWRHQMV ALAARGFRAV APDMRGYGDS DVPPSAGSYS IFHLVGDLVA LIADLAQPQV
101: FVVGHDWGAL VAWQLCLLRP DLVRALVNLS VAYHPRSSEG SPLQVVRALC GEDHYMCRFQ EPGVAEAEFA LYDNSHKFKT VFGMRKPAPP ILPKDKTFFD
201: SLDSDGTCPP WLSEEDISYY ADKFEKTGFT GGLNYYRCMD LNWELSAPWT GAPIKIATKF IVGDLDVTYS VPGVKDYIHK GGLKASVPNL EDVVVMEGVS
301: HFCNQEKPNE VSDYICEFFS KF

Best Arabidopsis Sequence Match ( AT3G05600.1 )
(BLAST)

001: MEGIDHRMVS VNGITMHIAE KGPKEGPVVL LLHGFPDLWY TWRHQISGLS SLGYRAVAPD LRGYGDSDSP ESFSEYTCLN VVGDLVALLD SVAGNQEKVF
101: LVGHDWGAII GWFLCLFRPE KINGFVCLSV PYRSRNPKVK PVQGFKAVFG DDYYICRFQE PGKIEGEIAS ADPRIFLRNL FTGRTLGPPI LPKDNPFGEK
201: PNPNSENIEL PEWFSKKDLD FYVSKFEKAG FTGGLNYYRA MDLNWELTAP WTGAKIQVPV KFMTGDFDMV YTTPGMKEYI HGGGFAADVP TLQEIVVIED
301: AGHFVNQEKP QEVTAHINDF FTKLRDNNKS F

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9M9W5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.