Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- peroxisome 1
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G055400.1 | Wheat | cytosol, peroxisome, plastid | 93.88 | 93.88 |
| TraesCS3A01G538800.2 | Wheat | cytosol | 71.25 | 89.62 |
| TraesCS4A01G366000.1 | Wheat | peroxisome | 70.03 | 66.57 |
| TraesCS4A01G366100.1 | Wheat | peroxisome | 56.88 | 55.52 |
| TraesCS3A01G255200.1 | Wheat | peroxisome | 49.24 | 50.47 |
| TraesCS7A01G225600.1 | Wheat | cytosol | 48.32 | 49.07 |
| TraesCS7A01G222400.1 | Wheat | cytosol | 45.26 | 48.84 |
| TraesCS3A01G175200.2 | Wheat | peroxisome | 46.18 | 46.89 |
| TraesCS7A01G222600.1 | Wheat | golgi, unclear | 46.18 | 42.9 |
| TraesCS5A01G053600.1 | Wheat | cytosol | 43.73 | 42.56 |
| TraesCS6A01G029300.1 | Wheat | cytosol | 42.2 | 42.2 |
| TraesCS1A01G170700.1 | Wheat | cytosol, peroxisome, plastid | 29.66 | 31.19 |
| TraesCS1A01G170600.1 | Wheat | cytosol | 29.36 | 30.38 |
| HORVU5Hr1G115800.1 | Barley | peroxisome | 24.16 | 30.15 |
| TraesCS2A01G526600.1 | Wheat | plastid | 15.29 | 21.64 |
Protein Annotations
| EnsemblPlants:TraesCS3A01G536800.1 | EnsemblPlantsGene:TraesCS3A01G536800 | Gene3D:3.40.50.1820 | GO:GO:0003674 | GO:GO:0003824 | InterPro:AB_hydrolase |
| InterPro:AB_hydrolase_1 | InterPro:Epox_hydrolase-like | InterPro:IPR029058 | PANTHER:PTHR43329 | PANTHER:PTHR43329:SF23 | PFAM:PF00561 |
| PRINTS:PR00412 | SUPFAM:SSF53474 | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr3A:+:748339495..748341006
Molecular Weight (calculated)
36973.2 Da
IEP (calculated)
5.676
GRAVY (calculated)
-0.084
Length
327 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGVVIRRQT VEVNGISMHV AEAGPEVDAK GAVLFLHGFP ELWYSWRHQM EHLAIRGYHC VAPDLRGYGG TTAPPDVASY TSFHIVGDLV ALLNTLGIAK
101: VFLVGHDWGA LIAWYMCMFR PERVTALVNT SVAFMRHIMI RTGPDFVNPI EYFNRAYGSN YYMCCFQEPA VAEKQFPPAH AKRLMRQLLC HCFSHGVFCD
201: EEMDDNKFPT SPLPPWLTEA DIDYFVTSFE KTGFTGAINY YRNLDKNREL AAPWADAKVQ VPTKYIVGGG NITYNFEGIQ EYIHGGGFKE DVPLLDEVVD
301: IPGAGHFIQQ ERAQDVSDHI YDFIIKF
101: VFLVGHDWGA LIAWYMCMFR PERVTALVNT SVAFMRHIMI RTGPDFVNPI EYFNRAYGSN YYMCCFQEPA VAEKQFPPAH AKRLMRQLLC HCFSHGVFCD
201: EEMDDNKFPT SPLPPWLTEA DIDYFVTSFE KTGFTGAINY YRNLDKNREL AAPWADAKVQ VPTKYIVGGG NITYNFEGIQ EYIHGGGFKE DVPLLDEVVD
301: IPGAGHFIQQ ERAQDVSDHI YDFIIKF
001: MEHRKVRGNG IDIHVAIQGP SDGPIVLLLH GFPELWYSWR HQIPGLAARG YRAVAPDLRG YGDSDAPAEI SSYTCFNIVG DLIAVISALT ASEDEKVFVV
101: GHDWGALIAW YLCLFRPDRV KALVNLSVPF SFRPTDPSVK PVDRMRAFYG DDYYICRFQE FGDVEAEIAE VGTERVMKRL LTYRTPGPVI IPKDKSFWGS
201: KGETIPLPSW LTEEDVAYFV SKFEEKGFSG PVNYYRNFNR NNELLGPWVG SKIQVPTKFV IGELDLVYYM PGVKEYIHGP QFKEDVPLLE EPVVMEGVAH
301: FINQEKPQEI LQIILDFISK F
101: GHDWGALIAW YLCLFRPDRV KALVNLSVPF SFRPTDPSVK PVDRMRAFYG DDYYICRFQE FGDVEAEIAE VGTERVMKRL LTYRTPGPVI IPKDKSFWGS
201: KGETIPLPSW LTEEDVAYFV SKFEEKGFSG PVNYYRNFNR NNELLGPWVG SKIQVPTKFV IGELDLVYYM PGVKEYIHGP QFKEDVPLLE EPVVMEGVAH
301: FINQEKPQEI LQIILDFISK F
Arabidopsis Description
ATSEHATsEH [Source:UniProtKB/TrEMBL;Acc:Q42566]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.