Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, plastid, cytosol
Predictor Summary:
Predictor Summary:
- peroxisome 1
- mitochondrion 1
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G536800.1 | Wheat | cytosol | 93.88 | 93.88 |
| TraesCS3B01G606900.1 | Wheat | cytosol | 85.02 | 88.25 |
| TraesCS1B01G061000.1 | Wheat | peroxisome | 24.16 | 78.22 |
| TraesCS1B01G061100.1 | Wheat | cytosol | 40.06 | 77.06 |
| TraesCS5B01G507300.1 | Wheat | peroxisome | 70.64 | 66.76 |
| TraesCS5B01G507200.1 | Wheat | peroxisome | 57.19 | 55.82 |
| TraesCS3B01G088600.1 | Wheat | cytosol, peroxisome, plasma membrane | 48.93 | 49.54 |
| TraesCS3B01G204900.1 | Wheat | peroxisome | 48.32 | 49.07 |
| TraesCS7B01G128800.1 | Wheat | cytosol | 47.71 | 48.45 |
| TraesCS7B01G194000.1 | Wheat | cytosol | 47.71 | 48.3 |
| TraesCS7B01G129100.1 | Wheat | cytosol | 47.4 | 48.14 |
| TraesCS7B01G128900.1 | Wheat | unclear | 46.79 | 47.52 |
| TraesCS1B01G186600.1 | Wheat | cytosol, peroxisome, plastid | 31.19 | 32.8 |
| TraesCS2B01G556900.1 | Wheat | peroxisome | 30.28 | 31.73 |
| TraesCS1B01G186700.1 | Wheat | cytosol | 30.28 | 31.13 |
| HORVU5Hr1G115800.1 | Barley | peroxisome | 22.63 | 28.24 |
Protein Annotations
| EnsemblPlants:TraesCS3B01G055400.1 | EnsemblPlantsGene:TraesCS3B01G055400 | Gene3D:3.40.50.1820 | GO:GO:0003674 | GO:GO:0003824 | InterPro:AB_hydrolase |
| InterPro:AB_hydrolase_1 | InterPro:Epox_hydrolase-like | InterPro:IPR029058 | PANTHER:PTHR43329 | PANTHER:PTHR43329:SF23 | PFAM:PF12697 |
| PRINTS:PR00412 | SUPFAM:SSF53474 | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr3B:-:28606392..28607901
Molecular Weight (calculated)
36987.3 Da
IEP (calculated)
5.966
GRAVY (calculated)
-0.021
Length
327 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGVVIRHQT VEVNGISMHV AKAGPKVDAK GAVLFLHGFP ELWYSWLHQM EHLAIRGYHC VAPDLRGYGG TTAPLDVASY TPFHIVGDLV ALLNTLGIAK
101: VFLVGHDWGA LIAWYMCLFR PERVTALVNT SIAFMRHIMI RTGPDFVNPI EYFNRAYGSN YYVCRFQEPG VAEKQFAPAH AKRLMRQLLC HCFSHGVFCD
201: EEMDDNKFPT SPLPPWLTEA DIDYFVTSFE KTGFTGAINY YRNLDKNCEL AAPWADAKLQ VPTKYIVGDG DITYNFEGIQ EYIHDGGFKE DVPLLDEVVV
301: IPGAGHFIQQ ERAQNISDHI YDFIIKF
101: VFLVGHDWGA LIAWYMCLFR PERVTALVNT SIAFMRHIMI RTGPDFVNPI EYFNRAYGSN YYVCRFQEPG VAEKQFAPAH AKRLMRQLLC HCFSHGVFCD
201: EEMDDNKFPT SPLPPWLTEA DIDYFVTSFE KTGFTGAINY YRNLDKNCEL AAPWADAKLQ VPTKYIVGDG DITYNFEGIQ EYIHDGGFKE DVPLLDEVVV
301: IPGAGHFIQQ ERAQNISDHI YDFIIKF
001: MEHRKVRGNG IDIHVAIQGP SDGPIVLLLH GFPELWYSWR HQIPGLAARG YRAVAPDLRG YGDSDAPAEI SSYTCFNIVG DLIAVISALT ASEDEKVFVV
101: GHDWGALIAW YLCLFRPDRV KALVNLSVPF SFRPTDPSVK PVDRMRAFYG DDYYICRFQE FGDVEAEIAE VGTERVMKRL LTYRTPGPVI IPKDKSFWGS
201: KGETIPLPSW LTEEDVAYFV SKFEEKGFSG PVNYYRNFNR NNELLGPWVG SKIQVPTKFV IGELDLVYYM PGVKEYIHGP QFKEDVPLLE EPVVMEGVAH
301: FINQEKPQEI LQIILDFISK F
101: GHDWGALIAW YLCLFRPDRV KALVNLSVPF SFRPTDPSVK PVDRMRAFYG DDYYICRFQE FGDVEAEIAE VGTERVMKRL LTYRTPGPVI IPKDKSFWGS
201: KGETIPLPSW LTEEDVAYFV SKFEEKGFSG PVNYYRNFNR NNELLGPWVG SKIQVPTKFV IGELDLVYYM PGVKEYIHGP QFKEDVPLLE EPVVMEGVAH
301: FINQEKPQEI LQIILDFISK F
Arabidopsis Description
ATSEHATsEH [Source:UniProtKB/TrEMBL;Acc:Q42566]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.