Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- nucleus 1
- peroxisome 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G048000.1 | Wheat | cytosol, peroxisome, plastid | 95.05 | 28.66 |
| TraesCS3B01G606900.1 | Wheat | cytosol | 79.21 | 25.4 |
| TraesCS3B01G055400.1 | Wheat | cytosol, peroxisome, plastid | 78.22 | 24.16 |
| TraesCS5B01G507300.1 | Wheat | peroxisome | 71.29 | 20.81 |
| TraesCS5B01G507200.1 | Wheat | peroxisome | 65.35 | 19.7 |
| TraesCS7B01G128800.1 | Wheat | cytosol | 61.39 | 19.25 |
| TraesCS7B01G128900.1 | Wheat | unclear | 60.4 | 18.94 |
| TraesCS7B01G129100.1 | Wheat | cytosol | 60.4 | 18.94 |
| TraesCS3B01G204900.1 | Wheat | peroxisome | 57.43 | 18.01 |
| TraesCS7B01G194000.1 | Wheat | cytosol | 57.43 | 17.96 |
| TraesCS3B01G088600.1 | Wheat | cytosol, peroxisome, plasma membrane | 54.46 | 17.03 |
| TraesCS1B01G186600.1 | Wheat | cytosol, peroxisome, plastid | 44.55 | 14.47 |
| TraesCS2B01G556900.1 | Wheat | peroxisome | 44.55 | 14.42 |
| TraesCS1B01G186700.1 | Wheat | cytosol | 44.55 | 14.15 |
| TraesCS1B01G061100.1 | Wheat | cytosol | 2.97 | 1.76 |
| HORVU1Hr1G009090.4 | Barley | peroxisome | 1.98 | 0.85 |
Protein Annotations
| EnsemblPlants:TraesCS1B01G061000.1 | EnsemblPlantsGene:TraesCS1B01G061000 | Gene3D:3.40.50.1820 | GO:GO:0003674 | GO:GO:0003824 | InterPro:AB_hydrolase |
| InterPro:AB_hydrolase_1 | InterPro:Epox_hydrolase-like | InterPro:IPR029058 | PANTHER:PTHR43329 | PANTHER:PTHR43329:SF23 | PFAM:PF00561 |
| PRINTS:PR00412 | SUPFAM:SSF53474 | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr1B:+:45249261..45249566
Molecular Weight (calculated)
11133.3 Da
IEP (calculated)
6.384
GRAVY (calculated)
0.002
Length
101 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGAVIRHRT VEVNDFLMHV AEAGPEGHSK GTVLFLHGFP ELWYTWRHQM ENLAARGYHC VAPDLRGYGG TTAPSDVESY TAFHIVGDIL ALLNTLGLAK
101: V
101: V
001: MEHRNVRGNG IDIHVAIQGP SDGTIVLLLH GFPELWYSWR HQISGLAARG YRAVAPDLRG YGDSDAPAEI SSFTCFNIVG DLVAVISTLI KEDKKVFVVG
101: HDWGALIAWY LCLFRPDKVK ALVNLSVPLS FWPTDPSVKP VDRMRAVYGN DYYVCRFQEV GDIEAEIAEV GTERVMKRLL TYRTPGPLII PKDKSFWGSK
201: GETIPLPSWL TEEDVAYFVS KFKEKGFCGP VNYYRNFNRN NELLGPWVGS KIQVPTKFVI GELDLVYYMP GVKEYIHGPQ FKEDVPLIEE PVVMEGVAHF
301: LNQEKPQEIL QIILDFISTF
101: HDWGALIAWY LCLFRPDKVK ALVNLSVPLS FWPTDPSVKP VDRMRAVYGN DYYVCRFQEV GDIEAEIAEV GTERVMKRLL TYRTPGPLII PKDKSFWGSK
201: GETIPLPSWL TEEDVAYFVS KFKEKGFCGP VNYYRNFNRN NELLGPWVGS KIQVPTKFVI GELDLVYYMP GVKEYIHGPQ FKEDVPLIEE PVVMEGVAHF
301: LNQEKPQEIL QIILDFISTF
Arabidopsis Description
Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:O48789]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.