Factsheet for TraesCS1D01G048000.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

peroxisome 1
mitochondrion 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plastid
Any Predictor:	cytosol, mitochondrion, peroxisome, plastid
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G061100.1	Wheat	cytosol	48.96	96.47
TraesCS1B01G061000.1	Wheat	peroxisome	28.66	95.05
TraesCS3D01G545700.1	Wheat	cytosol, peroxisome, plastid	80.0	81.96
TraesCS5D01G507300.1	Wheat	cytosol, peroxisome, plastid	68.06	66.28
TraesCS5D01G507100.1	Wheat	cytosol, mitochondrion, peroxisome, plastid	37.01	64.25
TraesCS5D01G507000.1	Wheat	peroxisome	57.91	58.26
TraesCS7D01G228900.1	Wheat	cytosol	48.96	53.25
TraesCS7D01G224000.1	Wheat	unclear	48.66	50.62
TraesCS3D01G074100.1	Wheat	cytosol, peroxisome, plasma membrane	48.66	50.46
TraesCS3D01G180600.1	Wheat	peroxisome	47.76	49.69
HORVU1Hr1G009090.4	Barley	peroxisome	33.13	47.03
TraesCS7D01G224200.1	Wheat	golgi, unclear	48.06	45.87
TraesCS5D01G065000.1	Wheat	cytosol	42.99	44.17
TraesCS1D01G168400.1	Wheat	cytosol, peroxisome, plastid	32.54	35.05
TraesCS2D01G529300.1	Wheat	peroxisome	30.75	33.55
TraesCS1D01G168300.4	Wheat	peroxisome	29.25	30.62

Protein Annotations

EnsemblPlants:TraesCS1D01G048000.1	EnsemblPlantsGene:TraesCS1D01G048000	Gene3D:3.40.50.1820	GO:GO:0003674	GO:GO:0003824	InterPro:AB_hydrolase
InterPro:AB_hydrolase_1	InterPro:Epox_hydrolase-like	InterPro:IPR029058	PANTHER:PTHR43329	PANTHER:PTHR43329:SF23	PFAM:PF12697
PRINTS:PR00412	SEG:seg	SUPFAM:SSF53474	MapMan:35.2	:	:

Description

No Description!

Coordinates

chr1D:+:28165388..28167168

Molecular Weight (calculated)

37713.8 Da

IEP (calculated)

5.805

GRAVY (calculated)

-0.149

Length

335 amino acids

Sequence
(BLAST)

001: MTSMEGVVIK HRTVEVNDIS MHVAEAGPEG HSKGTVLFLH GFPELWYTWR HQMENLAARG YHCVAPDLRG YGGTTAPSDV ESYTAFHIVG DIVALLNTLG
101: LAKVFVVGHD WGALIAWYVC LFRPDRVTAL VNTSLAFIRN IIARNGPGFV KPTDYFNRAY GPDYYMCRFQ EPGVAEARQF APAHARRLLR QIMCHCFSHG
201: VACEEEMHDN KYPTSTLPPW LTEEDVDYFG AEFERTGFTG GINYYRNLDR NCELAAAWAD AKVQVPTKYV VGEGEITYHF EGVREYIHGG GFKEDVPLLE
301: EVVVLPGAGH FIQLERAQEV SDHIYDFIIK FSPPT

Best Arabidopsis Sequence Match ( AT2G26740.1 )
(BLAST)

001: MEHRKVRGNG IDIHVAIQGP SDGPIVLLLH GFPELWYSWR HQIPGLAARG YRAVAPDLRG YGDSDAPAEI SSYTCFNIVG DLIAVISALT ASEDEKVFVV
101: GHDWGALIAW YLCLFRPDRV KALVNLSVPF SFRPTDPSVK PVDRMRAFYG DDYYICRFQE FGDVEAEIAE VGTERVMKRL LTYRTPGPVI IPKDKSFWGS
201: KGETIPLPSW LTEEDVAYFV SKFEEKGFSG PVNYYRNFNR NNELLGPWVG SKIQVPTKFV IGELDLVYYM PGVKEYIHGP QFKEDVPLLE EPVVMEGVAH
301: FINQEKPQEI LQIILDFISK F

Arabidopsis Description

ATSEHATsEH [Source:UniProtKB/TrEMBL;Acc:Q42566]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.