Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- peroxisome 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G170600.1 | Wheat | cytosol | 94.38 | 95.57 |
| TraesCS1B01G186700.1 | Wheat | cytosol | 94.38 | 94.97 |
| EES09308 | Sorghum | cytosol, peroxisome, plastid | 85.62 | 86.71 |
| Os10t0498500-00 | Rice | cytosol | 70.0 | 83.27 |
| Os10t0498200-01 | Rice | cytosol, peroxisome, plastid | 82.19 | 82.7 |
| HORVU1Hr1G044740.2 | Barley | plastid | 93.12 | 76.21 |
| Os10t0498300-01 | Rice | cytosol, peroxisome, plastid | 78.12 | 75.3 |
| TraesCS1D01G168400.1 | Wheat | cytosol, peroxisome, plastid | 73.12 | 75.24 |
| TraesCS2D01G529300.1 | Wheat | peroxisome | 66.25 | 69.06 |
| GSMUA_Achr8P14130_001 | Banana | cytosol | 62.81 | 62.23 |
| KRH25591 | Soybean | cytosol | 57.5 | 58.6 |
| VIT_12s0059g00230.t01 | Wine grape | cytosol, peroxisome, vacuole | 57.19 | 58.47 |
| PGSC0003DMT400055784 | Potato | cytosol, peroxisome, plastid | 56.56 | 58.2 |
| VIT_12s0059g00220.t01 | Wine grape | peroxisome | 56.88 | 58.15 |
| KRH22405 | Soybean | cytoskeleton, cytosol, peroxisome | 56.25 | 57.88 |
| VIT_12s0059g00210.t01 | Wine grape | peroxisome | 55.94 | 57.19 |
| KRH55995 | Soybean | nucleus | 55.62 | 56.51 |
| KRH55994 | Soybean | cytosol | 55.31 | 56.37 |
| Solyc02g078570.2.1 | Tomato | extracellular | 55.0 | 55.87 |
| KRH26931 | Soybean | cytoskeleton, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole | 47.5 | 54.48 |
| KRH25546 | Soybean | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 56.56 | 53.39 |
| KRH25547 | Soybean | cytosol | 24.06 | 51.33 |
| KRH25548 | Soybean | cytosol | 25.62 | 46.59 |
| KRH37569 | Soybean | cytosol | 26.25 | 46.41 |
| KRG94755 | Soybean | cytosol, peroxisome, plastid | 39.06 | 42.96 |
| TraesCS5D01G065000.1 | Wheat | cytosol | 40.0 | 39.26 |
| TraesCS7D01G228900.1 | Wheat | cytosol | 33.75 | 35.06 |
| TraesCS7D01G224000.1 | Wheat | unclear | 35.0 | 34.78 |
| TraesCS7D01G224200.1 | Wheat | golgi, unclear | 35.31 | 32.19 |
| TraesCS3D01G180600.1 | Wheat | peroxisome | 31.88 | 31.68 |
| TraesCS3D01G545700.1 | Wheat | cytosol, peroxisome, plastid | 31.88 | 31.19 |
| TraesCS5D01G507000.1 | Wheat | peroxisome | 32.19 | 30.93 |
| TraesCS1D01G048000.1 | Wheat | cytosol, peroxisome, plastid | 30.62 | 29.25 |
| TraesCS3D01G074100.1 | Wheat | cytosol, peroxisome, plasma membrane | 29.38 | 29.1 |
| TraesCS5D01G507300.1 | Wheat | cytosol, peroxisome, plastid | 30.0 | 27.91 |
| TraesCS5D01G507100.1 | Wheat | cytosol, mitochondrion, peroxisome, plastid | 12.5 | 20.73 |
Protein Annotations
| EnsemblPlants:TraesCS1D01G168300.4 | EnsemblPlantsGene:TraesCS1D01G168300 | Gene3D:3.40.50.1820 | GO:GO:0003674 | GO:GO:0003824 | InterPro:AB_hydrolase |
| InterPro:AB_hydrolase_1 | InterPro:Epox_hydrolase-like | InterPro:IPR029058 | PANTHER:PTHR43329 | PANTHER:PTHR43329:SF3 | PFAM:PF00561 |
| PRINTS:PR00111 | PRINTS:PR00412 | SEG:seg | SUPFAM:SSF53474 | MapMan:35.2 | : |
Description
No Description!
Coordinates
chr1D:-:240593758..240595963
Molecular Weight (calculated)
36039.3 Da
IEP (calculated)
4.897
GRAVY (calculated)
-0.114
Length
320 amino acids
Sequence
(BLAST)
(BLAST)
001: MAMAEQQQQI EHSHLAIRGL NLHVAQAGTG ELGTVLFLHG FPEIWYSWRH QMLAVAAAGY RAIAPDWRGY GLSDQPPEPE AAVYRDLEED LLAVLDALSV
101: PKAYLVAKDF GAMPAYDFAL RHPNRTCGVM CLGIPFLHGG SSFTAMPEGF YILPCAVQEP GRAEADFGRY DVKRVVRTIY ILFSRSEIPT AKEDQEIMDL
201: ADLSTPLPEW FTEEDLAVYT SLYEKSGFVY PLQMPYRSLH KRHPIEDPKF EVPVFVVMGE KDYVIKFPGV EAVLKNGTME KFAPDLKITY IPEGSHFVQE
301: QFPDKVNELL LGFLKDHPVA
101: PKAYLVAKDF GAMPAYDFAL RHPNRTCGVM CLGIPFLHGG SSFTAMPEGF YILPCAVQEP GRAEADFGRY DVKRVVRTIY ILFSRSEIPT AKEDQEIMDL
201: ADLSTPLPEW FTEEDLAVYT SLYEKSGFVY PLQMPYRSLH KRHPIEDPKF EVPVFVVMGE KDYVIKFPGV EAVLKNGTME KFAPDLKITY IPEGSHFVQE
301: QFPDKVNELL LGFLKDHPVA
001: MEHRKVRGNG IDIHVAIQGP SDGPIVLLLH GFPELWYSWR HQIPGLAARG YRAVAPDLRG YGDSDAPAEI SSYTCFNIVG DLIAVISALT ASEDEKVFVV
101: GHDWGALIAW YLCLFRPDRV KALVNLSVPF SFRPTDPSVK PVDRMRAFYG DDYYICRFQE FGDVEAEIAE VGTERVMKRL LTYRTPGPVI IPKDKSFWGS
201: KGETIPLPSW LTEEDVAYFV SKFEEKGFSG PVNYYRNFNR NNELLGPWVG SKIQVPTKFV IGELDLVYYM PGVKEYIHGP QFKEDVPLLE EPVVMEGVAH
301: FINQEKPQEI LQIILDFISK F
101: GHDWGALIAW YLCLFRPDRV KALVNLSVPF SFRPTDPSVK PVDRMRAFYG DDYYICRFQE FGDVEAEIAE VGTERVMKRL LTYRTPGPVI IPKDKSFWGS
201: KGETIPLPSW LTEEDVAYFV SKFEEKGFSG PVNYYRNFNR NNELLGPWVG SKIQVPTKFV IGELDLVYYM PGVKEYIHGP QFKEDVPLLE EPVVMEGVAH
301: FINQEKPQEI LQIILDFISK F
Arabidopsis Description
ATSEHATsEH [Source:UniProtKB/TrEMBL;Acc:Q42566]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.