Factsheet for Solyc02g078570.2.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

cytosol 2
peroxisome 1
plastid 1
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

extracellular: 22892874

msms PMID: 22892874 doi

EH Konozy, H Rogniaux, M Causse, M Faurobert

Unité de Génétique et Amélioration des Fruits et Légumes, INRA, BP 94, 84143 Montfavet, France. ehkonozy@yahoo.com

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400057633	Potato	peroxisome	94.6	94.6
VIT_00s0370g00060.t01	Wine grape	peroxisome, plasma membrane, plastid	65.4	66.24
VIT_00s0370g00070.t01	Wine grape	cytosol, peroxisome, plastid	65.08	66.13
KRH20490	Soybean	cytosol	63.81	64.63
KRH55994	Soybean	cytosol	62.22	62.42
KRH55995	Soybean	nucleus	61.9	61.9
VIT_12s0059g00220.t01	Wine grape	peroxisome	60.95	61.34
KRH25591	Soybean	cytosol	60.95	61.15
KRH20488	Soybean	peroxisome	64.76	61.08
VIT_12s0059g00230.t01	Wine grape	cytosol, peroxisome, vacuole	60.32	60.7
KRH22405	Soybean	cytoskeleton, cytosol, peroxisome	59.68	60.45
VIT_12s0059g00210.t01	Wine grape	peroxisome	60.0	60.38
TraesCS1D01G168400.1	Wheat	cytosol, peroxisome, plastid	58.1	58.84
TraesCS1A01G170700.1	Wheat	cytosol, peroxisome, plastid	58.1	58.84
TraesCS1B01G186600.1	Wheat	cytosol, peroxisome, plastid	57.78	58.52
KRH25546	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	61.9	57.52
HORVU1Hr1G044770.1	Barley	cytosol, peroxisome	56.51	57.05
Os10t0498500-00	Rice	cytosol	48.57	56.88
GSMUA_Achr8P14130_001	Banana	cytosol	57.78	56.35
EES05333	Sorghum	cytosol, golgi, peroxisome	55.87	56.05
Os10t0498200-01	Rice	cytosol, peroxisome, plastid	56.51	55.97
TraesCS1A01G170600.1	Wheat	cytosol	55.87	55.7
TraesCS1B01G186700.1	Wheat	cytosol	56.19	55.66
Zm00001d032570_P002	Maize	cytosol	56.19	55.49
KRH26931	Soybean	cytoskeleton, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	48.89	55.2
EES09308	Sorghum	cytosol, peroxisome, plastid	55.24	55.06
TraesCS1D01G168300.4	Wheat	peroxisome	55.87	55.0
KRH25547	Soybean	cytosol	26.03	54.67
OQU91562	Sorghum	cytosol	55.24	54.21
Zm00001d013934_P001	Maize	extracellular	53.65	53.65
EER94004	Sorghum	cytosol	53.33	53.33
TraesCS2D01G529300.1	Wheat	peroxisome	51.43	52.77
Os10t0498000-01	Rice	golgi, mitochondrion, peroxisome	51.75	52.41
Os10t0498300-01	Rice	cytosol, peroxisome, plastid	54.92	52.11
TraesCS2B01G556900.1	Wheat	peroxisome	51.43	51.92
KRH25548	Soybean	cytosol	28.25	50.57
HORVU2Hr1G116250.4	Barley	peroxisome	45.4	49.31
KRH37569	Soybean	cytosol	27.94	48.62
KRG94755	Soybean	cytosol, peroxisome, plastid	42.86	46.39
HORVU1Hr1G044740.2	Barley	plastid	55.56	44.76
TraesCS2A01G526600.1	Wheat	plastid	28.57	38.96
Solyc01g066460.2.1	Tomato	cytosol, peroxisome	23.49	37.95
Solyc01g066470.2.1	Tomato	cytosol, peroxisome	23.17	37.44
Solyc06g009170.2.1	Tomato	extracellular	37.46	37.11
Solyc05g054320.2.1	Tomato	cytosol	37.78	37.07
Solyc05g054350.2.1	Tomato	plastid	36.83	36.14
Solyc09g075300.2.1	Tomato	cytosol	35.24	34.91
Solyc12g099430.1.1	Tomato	cytosol	35.56	34.67
Solyc01g066450.2.1	Tomato	cytosol	36.83	34.63
Solyc01g099910.2.1	Tomato	cytosol	34.29	34.39
HORVU2Hr1G116180.3	Barley	peroxisome	23.49	32.74
Os10t0498100-01	Rice	vacuole	31.43	32.04

Protein Annotations

EnsemblPlants:Solyc02g078570.2.1	EnsemblPlantsGene:Solyc02g078570.2	Gene3D:3.40.50.1820	GO:GO:0003674	GO:GO:0003824	InterPro:AB_hydrolase
InterPro:AB_hydrolase_1	InterPro:Epox_hydrolase-like	InterPro:IPR029058	PANTHER:PTHR43329	PANTHER:PTHR43329:SF19	PFAM:PF00561
PRINTS:PR00111	PRINTS:PR00412	SEG:seg	SUPFAM:SSF53474	UniParc:UPI00027682BA	UniProt:K4B981
MapMan:35.2	:	:	:	:	:

Description

No Description!

Coordinates

chr2:-:43234612..43236921

Molecular Weight (calculated)

35625.9 Da

IEP (calculated)

5.229

GRAVY (calculated)

-0.058

Length

315 amino acids

Sequence
(BLAST)

001: MEEIEHKYIE VNGLKLHIAE IGSGFSPVVV FLHGFPEIWY SWRYQMKAVA KAGYRAIAPD YRGYGLSDQP TQPEKTTFLD LVSDLLALLD ALNISKVFLV
101: GKDFGSFVIS YFSILHKERV SGFIVMGVPF LPPKPLEFKK GLPEGFYISR FGIPGRAEAD FGRLDAKTVV RNVYILFSRS ELPIANEDQE IMDIVQPSTP
201: LPPWFSEEDL AAYGALYEKS GFRTALQVPY RSLHEQVNIT DPTVHVQALY IKGEKDYFLK FPGIEDYISS GVLKSLVPNL QIVNLPEGNH FVQEQLPDEV
301: NQLVLEFLTK NSKVQ

Best Arabidopsis Sequence Match ( AT3G05600.1 )
(BLAST)

001: MEGIDHRMVS VNGITMHIAE KGPKEGPVVL LLHGFPDLWY TWRHQISGLS SLGYRAVAPD LRGYGDSDSP ESFSEYTCLN VVGDLVALLD SVAGNQEKVF
101: LVGHDWGAII GWFLCLFRPE KINGFVCLSV PYRSRNPKVK PVQGFKAVFG DDYYICRFQE PGKIEGEIAS ADPRIFLRNL FTGRTLGPPI LPKDNPFGEK
201: PNPNSENIEL PEWFSKKDLD FYVSKFEKAG FTGGLNYYRA MDLNWELTAP WTGAKIQVPV KFMTGDFDMV YTTPGMKEYI HGGGFAADVP TLQEIVVIED
301: AGHFVNQEKP QEVTAHINDF FTKLRDNNKS F

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9M9W5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.