Factsheet for VIT_00s0370g00060.t01

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, plasma membrane

Predictor Summary:

plastid 4
peroxisome 1
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_00s0370g00070.t01	Wine grape	cytosol, peroxisome, plastid	84.57	84.84
KRH20490	Soybean	cytosol	68.81	68.81
KRH20488	Soybean	peroxisome	70.42	65.57
Solyc02g078570.2.1	Tomato	extracellular	66.24	65.4
VIT_12s0059g00210.t01	Wine grape	peroxisome	64.95	64.54
VIT_12s0059g00220.t01	Wine grape	peroxisome	63.99	63.58
VIT_12s0059g00230.t01	Wine grape	cytosol, peroxisome, vacuole	63.34	62.94
VIT_05s0077g02030.t01	Wine grape	mitochondrion	12.54	41.49
VIT_04s0023g02610.t01	Wine grape	golgi, mitochondrion, peroxisome	37.94	37.11
VIT_14s0060g01940.t01	Wine grape	cytosol	37.62	36.91
VIT_07s0005g00700.t01	Wine grape	cytosol	36.33	35.65
VIT_03s0038g00100.t01	Wine grape	cytosol, mitochondrion, plastid, vacuole	12.86	34.78
VIT_15s0021g02470.t01	Wine grape	cytosol	35.05	34.38
VIT_05s0077g02010.t01	Wine grape	cytosol	34.08	33.44
VIT_05s0077g02020.t01	Wine grape	cytosol	33.44	32.81
VIT_05s0077g01990.t01	Wine grape	cytoskeleton, cytosol, peroxisome	32.15	31.55
VIT_03s0038g00090.t01	Wine grape	cytosol	11.25	27.78
VIT_05s0077g02000.t01	Wine grape	cytosol, mitochondrion, peroxisome	17.04	27.75

Protein Annotations

EntrezGene:100251752	wikigene:100251752	EntrezGene:109121414	Gene3D:3.40.50.1820	MapMan:35.2	InterPro:AB_hydrolase
InterPro:AB_hydrolase_1	ProteinID:CBI35692	ProteinID:CBI35692.3	UniProt:D7TYW5	InterPro:Epox_hydrolase-like	EMBL:FN596284
GO:GO:0003674	GO:GO:0003824	InterPro:IPR029058	EntrezGene:LOC100251752	wikigene:LOC100251752	PFAM:PF00561
PRINTS:PR00412	PANTHER:PTHR43329	PANTHER:PTHR43329:SF19	SUPFAM:SSF53474	UniParc:UPI0001BE4859	ArrayExpress:VIT_00s0370g00060
EnsemblPlantsGene:VIT_00s0370g00060	EnsemblPlants:VIT_00s0370g00060.t01	RefSeq:XP_003635273	RefSeq:XP_003635273.1	SEG:seg	:

Description

No Description!

Coordinates

chrUn:-:26087449..26089018

Molecular Weight (calculated)

35517.8 Da

IEP (calculated)

5.603

GRAVY (calculated)

-0.074

Length

311 amino acids

Sequence
(BLAST)

001: MDQIRHNFIH VNGLKLHVAE IGSGPTTVVF LHGFPEIWYS WRHQMIAVAK SGFRAIVPDY RGYGLSEPPP EPEKASFSDV IADLVGVLGF LGIDKVFLIA
101: KDFGVRPAYL FTVFHPEWVL GVVTVGVPFF PPGPSLYHNY LPEGFYMSRW REPGRAEADF GRLDAKTVVR NIYILFSKSE IPIAAENQEI MDMIDPSTPL
201: PPWFTEEDLT NYGALYEKSG FRTALQVPYR AFREEFNITD PKVKVPMLLI MGEKDYFFKF PGVEEYIRSG KAKTYVPDLE ITFLPEGTHF AQEQFPEQVN
301: QLLLTFLTKH I

Best Arabidopsis Sequence Match ( AT3G05600.1 )
(BLAST)

001: MEGIDHRMVS VNGITMHIAE KGPKEGPVVL LLHGFPDLWY TWRHQISGLS SLGYRAVAPD LRGYGDSDSP ESFSEYTCLN VVGDLVALLD SVAGNQEKVF
101: LVGHDWGAII GWFLCLFRPE KINGFVCLSV PYRSRNPKVK PVQGFKAVFG DDYYICRFQE PGKIEGEIAS ADPRIFLRNL FTGRTLGPPI LPKDNPFGEK
201: PNPNSENIEL PEWFSKKDLD FYVSKFEKAG FTGGLNYYRA MDLNWELTAP WTGAKIQVPV KFMTGDFDMV YTTPGMKEYI HGGGFAADVP TLQEIVVIED
301: AGHFVNQEKP QEVTAHINDF FTKLRDNNKS F

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9M9W5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.