Factsheet for VIT_00s0370g00070.t01

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

cytosol 2
nucleus 1
peroxisome 1
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_00s0370g00060.t01	Wine grape	peroxisome, plasma membrane, plastid	84.84	84.57
KRH20490	Soybean	cytosol	69.03	68.81
KRH20488	Soybean	peroxisome	71.61	66.47
VIT_12s0059g00230.t01	Wine grape	cytosol, peroxisome, vacuole	65.81	65.18
Solyc02g078570.2.1	Tomato	extracellular	66.13	65.08
VIT_12s0059g00220.t01	Wine grape	peroxisome	65.48	64.86
VIT_12s0059g00210.t01	Wine grape	peroxisome	64.84	64.22
VIT_03s0038g00100.t01	Wine grape	cytosol, mitochondrion, plastid, vacuole	14.52	39.13
VIT_04s0023g02610.t01	Wine grape	golgi, mitochondrion, peroxisome	38.06	37.11
VIT_15s0021g02470.t01	Wine grape	cytosol	37.42	36.59
VIT_14s0060g01940.t01	Wine grape	cytosol	37.1	36.28
VIT_05s0077g02030.t01	Wine grape	mitochondrion	10.97	36.17
VIT_05s0077g02020.t01	Wine grape	cytosol	36.45	35.65
VIT_07s0005g00700.t01	Wine grape	cytosol	35.81	35.02
VIT_05s0077g02010.t01	Wine grape	cytosol	34.84	34.07
VIT_05s0077g01990.t01	Wine grape	cytoskeleton, cytosol, peroxisome	32.9	32.18
VIT_03s0038g00090.t01	Wine grape	cytosol	11.29	27.78
VIT_05s0077g02000.t01	Wine grape	cytosol, mitochondrion, peroxisome	17.1	27.75

Protein Annotations

EntrezGene:100246611	wikigene:100246611	Gene3D:3.40.50.1820	MapMan:35.2	InterPro:AB_hydrolase	InterPro:AB_hydrolase_1
ProteinID:CBI35693	ProteinID:CBI35693.3	ncoils:Coil	UniProt:D7TYW6	InterPro:Epox_hydrolase-like	EMBL:FN596284
GO:GO:0003674	GO:GO:0003824	InterPro:IPR029058	EntrezGene:LOC100246611	wikigene:LOC100246611	PFAM:PF00561
PRINTS:PR00111	PRINTS:PR00412	PANTHER:PTHR43329	PANTHER:PTHR43329:SF19	SUPFAM:SSF53474	UniParc:UPI0001BE485A
ArrayExpress:VIT_00s0370g00070	EnsemblPlantsGene:VIT_00s0370g00070	EnsemblPlants:VIT_00s0370g00070.t01	unigene:Vvi.20818	RefSeq:XP_002270520	RefSeq:XP_002270520.2

Description

No Description!

Coordinates

chrUn:-:26090038..26092406

Molecular Weight (calculated)

34917.9 Da

IEP (calculated)

5.220

GRAVY (calculated)

-0.125

Length

310 amino acids

Sequence
(BLAST)

001: MDQIQHNFID VNGLKLHVAE IGSGPTTVVF LHGFPEIWYS WRHQMIAVAK AGFRAIAPDH RGYGLSESPP EPEKASFSDL LADLVGILDF LGIDKVFLVA
101: KDFGGRPAYL LTVFHPERVL GVVTVGASFP PGPSVYIKNL PEGFYILRWQ EPGRAEADFG RFDAKTIVRN IYILFSRPEI PIAAENQEVM DMVDPSTPLP
201: PWFTEEDLTA YGTLYEKSGF RTALQVPYRS INEQFNKTNP KVEVPMLLIM GEKDFSFKFP GREEYIRSGK AKADVPNLEI TFLPEGSHFA QEQFPEQVNQ
301: LLLAFLTKHV

Best Arabidopsis Sequence Match ( AT3G05600.1 )
(BLAST)

001: MEGIDHRMVS VNGITMHIAE KGPKEGPVVL LLHGFPDLWY TWRHQISGLS SLGYRAVAPD LRGYGDSDSP ESFSEYTCLN VVGDLVALLD SVAGNQEKVF
101: LVGHDWGAII GWFLCLFRPE KINGFVCLSV PYRSRNPKVK PVQGFKAVFG DDYYICRFQE PGKIEGEIAS ADPRIFLRNL FTGRTLGPPI LPKDNPFGEK
201: PNPNSENIEL PEWFSKKDLD FYVSKFEKAG FTGGLNYYRA MDLNWELTAP WTGAKIQVPV KFMTGDFDMV YTTPGMKEYI HGGGFAADVP TLQEIVVIED
301: AGHFVNQEKP QEVTAHINDF FTKLRDNNKS F

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9M9W5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.