Factsheet for VIT_15s0021g02470.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
peroxisome 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome
BaCelLo:	cytosol
EpiLoc:	peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_03s0038g00090.t01	Wine grape	cytosol	35.02	88.1
VIT_03s0038g00100.t01	Wine grape	cytosol, mitochondrion, plastid, vacuole	27.44	75.65
VIT_04s0023g02610.t01	Wine grape	golgi, mitochondrion, peroxisome	64.35	64.15
Os12t0636400-01	Rice	cytosol, peroxisome	58.68	57.41
TraesCS5D01G065000.1	Wheat	cytosol	58.68	57.06
OQU79732	Sorghum	cytosol	56.47	55.42
TraesCS6A01G029300.1	Wheat	cytosol	57.1	55.35
TraesCS5A01G053600.1	Wheat	cytosol	57.73	54.46
EES17493	Sorghum	cytosol	55.52	53.99
Zm00001d041217_P002	Maize	extracellular	54.89	53.7
Zm00001d031203_P001	Maize	cytosol	55.52	53.5
Zm00001d031204_P003	Maize	cytosol	55.52	51.61
VIT_07s0005g00700.t01	Wine grape	cytosol	51.1	51.1
VIT_05s0077g02010.t01	Wine grape	cytosol	50.79	50.79
VIT_05s0077g02020.t01	Wine grape	cytosol	50.16	50.16
HORVU6Hr1G005400.4	Barley	cytosol, peroxisome, plastid	57.41	50.14
VIT_05s0077g01990.t01	Wine grape	cytoskeleton, cytosol, peroxisome	49.53	49.53
VIT_14s0060g01940.t01	Wine grape	cytosol	48.58	48.58
VIT_05s0077g02030.t01	Wine grape	mitochondrion	13.56	45.74
VIT_12s0059g00230.t01	Wine grape	cytosol, peroxisome, vacuole	37.54	38.02
VIT_05s0077g02000.t01	Wine grape	cytosol, mitochondrion, peroxisome	22.71	37.7
VIT_00s0370g00070.t01	Wine grape	cytosol, peroxisome, plastid	36.59	37.42
VIT_12s0059g00220.t01	Wine grape	peroxisome	36.91	37.38
HORVU5Hr1G012890.5	Barley	plastid	36.59	35.47
VIT_12s0059g00210.t01	Wine grape	peroxisome	35.02	35.46
VIT_00s0370g00060.t01	Wine grape	peroxisome, plasma membrane, plastid	34.38	35.05

Protein Annotations

EntrezGene:100259848	wikigene:100259848	Gene3D:3.40.50.1820	MapMan:35.2	InterPro:AB_hydrolase	InterPro:AB_hydrolase_1
EMBL:AM483925	ProteinID:CAN77654	ProteinID:CAN77654.1	ProteinID:CBI16602	ProteinID:CBI16602.3	UniProt:D7SLS4
InterPro:Epox_hydrolase-like	EMBL:FN594952	GO:GO:0003674	GO:GO:0003824	InterPro:IPR029058	EntrezGene:LOC100259848
wikigene:LOC100259848	PFAM:PF00561	PRINTS:PR00111	PRINTS:PR00412	PANTHER:PTHR43329	PANTHER:PTHR43329:SF5
SUPFAM:SSF53474	UniParc:UPI00015C9C6D	ArrayExpress:VIT_15s0021g02470	EnsemblPlantsGene:VIT_15s0021g02470	EnsemblPlants:VIT_15s0021g02470.t01	RefSeq:XP_002275186
RefSeq:XP_002275186.1	RefSeq:XP_003631556	RefSeq:XP_003631556.1	:	:	:

Description

No Description!

Coordinates

chr15:-:13461334..13464258

Molecular Weight (calculated)

35636.9 Da

IEP (calculated)

5.380

GRAVY (calculated)

-0.097

Length

317 amino acids

Sequence
(BLAST)

001: MSTEGIIHRR ISTNGIWMHV AELGKGPLVL LIHGFPELWS SWNYQITHLA KHGYRVVAPD MRGYGDSDSP PDPASYTILH LVGDLIGLLD QLGEEKAFVV
101: GHDWGAEVAW HLCLLRPDRV KALVNLGVPF RPRSPELKPL KFMNQVFGDS LYIIQFQEPG RAEKSFSRYD CLTILKKFLL VNAPDLLAAP PGVEIIDFLD
201: TPSELPPWIT EEELQFSASK FQQSGFTGGL NYYRAMDMNW ELLGAWQGVK ITTPTKYIVG DKDLGFEAFG TREYIKGEAS KGLVPNMEVV VIDGHHYIQI
301: EKAERVTSEI LSFFGEC

Best Arabidopsis Sequence Match ( AT3G51000.1 )
(BLAST)

001: MTSSVREKKI KTNGIWLNVA EKGDEEGPLV LLLHGFPETW YSWRHQIDFL SSHGYHVVAP DLRGYGDSDS LPSHESYTVS HLVADVIGLL DHYGTTQAFV
101: AGHDWGAIIG WCLCLFRPDR VKGFISLSVP YFPRDPKLKP SDFFKIFGDG LYITQFQKPG RAEAAFAKHD CLSVMKKFLL ITRTDYLVAP PDTEIIDHLE
201: IPSTIPDWIT EEEIQVYAEK FQRSGFTGPL NYYRSMDMNW EILAPWQDSK IVVPTKFIAG DKDIGYEGPN GTMEYVKGEV FKIVVPNLEI VVIEGGHHFI
301: QQEKSEQVSQ EILSFLNKLS KTE

Arabidopsis Description

AT3g51000/F24M12_40 [Source:UniProtKB/TrEMBL;Acc:Q9SD45]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.