Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- peroxisome 1
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Os01t0255000-01 | |
| Os01t0255100-01 | |
| Os05t0273800-01 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G51000.1 | Os01t0255000-01 | AT2G26740.1 | 21798944 |
| AT3G51000.1 | Os01t0255100-01 | AT2G26740.1 | 21798944 |
| AT3G51000.1 | Os05t0273800-01 | AT2G26740.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G065000.1 | Wheat | cytosol | 77.16 | 76.69 |
| OQU79732 | Sorghum | cytosol | 75.62 | 75.85 |
| TraesCS6A01G029300.1 | Wheat | cytosol | 76.54 | 75.84 |
| TraesCS5A01G053600.1 | Wheat | cytosol | 77.16 | 74.4 |
| Zm00001d041217_P002 | Maize | extracellular | 73.15 | 73.15 |
| EES17493 | Sorghum | cytosol | 73.15 | 72.7 |
| Zm00001d031204_P003 | Maize | cytosol | 75.31 | 71.55 |
| Zm00001d031203_P001 | Maize | cytosol | 71.91 | 70.82 |
| HORVU6Hr1G005400.4 | Barley | cytosol, peroxisome, plastid | 75.93 | 67.77 |
| VIT_15s0021g02470.t01 | Wine grape | cytosol | 57.41 | 58.68 |
| VIT_03s0038g00090.t01 | Wine grape | cytosol | 22.22 | 57.14 |
| VIT_04s0023g02610.t01 | Wine grape | golgi, mitochondrion, peroxisome | 54.94 | 55.97 |
| CDY33304 | Canola | peroxisome | 54.32 | 54.32 |
| CDY26530 | Canola | peroxisome | 54.32 | 54.32 |
| KRH69845 | Soybean | cytosol | 54.32 | 53.82 |
| AT3G51000.1 | Thale cress | cytosol | 53.4 | 53.56 |
| Bra038876.1-P | Field mustard | peroxisome | 54.01 | 53.52 |
| CDX77971 | Canola | cytosol, peroxisome, plastid | 52.78 | 52.78 |
| Bra036841.1-P | Field mustard | peroxisome | 51.85 | 52.66 |
| KRH08141 | Soybean | cytosol | 53.09 | 52.6 |
| Os01t0255000-01 | Rice | cytosol | 50.93 | 51.24 |
| GSMUA_Achr5P19770_001 | Banana | cytosol | 16.05 | 50.0 |
| Os01t0255100-01 | Rice | cytosol | 49.69 | 49.69 |
| HORVU5Hr1G012890.5 | Barley | plastid | 49.07 | 48.62 |
| Os03t0829100-01 | Rice | peroxisome | 48.46 | 47.15 |
| CDX73754 | Canola | cytosol, peroxisome, plastid | 24.07 | 45.61 |
| Os05t0273800-01 | Rice | cytosol, peroxisome, plastid | 46.3 | 45.32 |
| Os03t0829200-01 | Rice | cytosol, peroxisome, plastid | 46.91 | 44.97 |
| Os10t0498500-00 | Rice | cytosol | 31.48 | 37.92 |
| Os10t0498200-01 | Rice | cytosol, peroxisome, plastid | 37.04 | 37.74 |
| Os10t0498300-01 | Rice | cytosol, peroxisome, plastid | 37.96 | 37.05 |
| Os10t0498000-01 | Rice | golgi, mitochondrion, peroxisome | 33.64 | 35.05 |
| CDX90672 | Canola | mitochondrion | 49.07 | 33.33 |
| Os10t0498100-01 | Rice | vacuole | 22.53 | 23.62 |
| CDY28994 | Canola | mitochondrion | 49.07 | 22.05 |
| CDX90673 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| Gene3D:3.40.50.1820 | MapMan:35.2 | UniProt:A0A0N7KUF3 | InterPro:AB_hydrolase | InterPro:AB_hydrolase_1 | ProteinID:BAT18258.1 |
| InterPro:Epox_hydrolase-like | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005829 | GO:GO:0016787 | InterPro:IPR029058 | EnsemblPlantsGene:Os12g0636400 | EnsemblPlants:Os12t0636400-01 |
| PFAM:PF12697 | PRINTS:PR00412 | PANTHER:PTHR43329 | PANTHER:PTHR43329:SF5 | SUPFAM:SSF53474 | UniParc:UPI000393BFBD |
| SEG:seg | : | : | : | : | : |
Description
Similar to Epoxide hydrolase 2. (Os12t0636400-01)
Coordinates
chr12:-:27286553..27288661
Molecular Weight (calculated)
35941.1 Da
IEP (calculated)
5.360
GRAVY (calculated)
-0.024
Length
324 amino acids
Sequence
(BLAST)
(BLAST)
001: AEAAMGGEVV RHWNADVNGI SLHVAEQGPA DGPPVLLIHG FPELWLSWRH QMAALAARGF RALAPDLRGY GDSTVPDDPA AYTVFHIVGD LVALLDHLAL
101: PKVMVVGHDL GAQVAWHLCL FRPDMLLAVV NLGVPFFPRG PSSLSEAFAG RDGLYIMQFQ EPGRAERAFA RYDVATVLKK FFSIEIDDLT APPGVEIIDF
201: LEARSTPLPW ISEEELGQYA EKFQKSGFTG PINYYRMMDT NWRLTAPWQN AKIMVPTKFI CGDKDTGLKS FGTEHFVKSG AFKSVVPNLE VVIIEGHHFI
301: QQEQAERVNS EILSYFDKFT GEKA
101: PKVMVVGHDL GAQVAWHLCL FRPDMLLAVV NLGVPFFPRG PSSLSEAFAG RDGLYIMQFQ EPGRAERAFA RYDVATVLKK FFSIEIDDLT APPGVEIIDF
201: LEARSTPLPW ISEEELGQYA EKFQKSGFTG PINYYRMMDT NWRLTAPWQN AKIMVPTKFI CGDKDTGLKS FGTEHFVKSG AFKSVVPNLE VVIIEGHHFI
301: QQEQAERVNS EILSYFDKFT GEKA
001: MTSSVREKKI KTNGIWLNVA EKGDEEGPLV LLLHGFPETW YSWRHQIDFL SSHGYHVVAP DLRGYGDSDS LPSHESYTVS HLVADVIGLL DHYGTTQAFV
101: AGHDWGAIIG WCLCLFRPDR VKGFISLSVP YFPRDPKLKP SDFFKIFGDG LYITQFQKPG RAEAAFAKHD CLSVMKKFLL ITRTDYLVAP PDTEIIDHLE
201: IPSTIPDWIT EEEIQVYAEK FQRSGFTGPL NYYRSMDMNW EILAPWQDSK IVVPTKFIAG DKDIGYEGPN GTMEYVKGEV FKIVVPNLEI VVIEGGHHFI
301: QQEKSEQVSQ EILSFLNKLS KTE
101: AGHDWGAIIG WCLCLFRPDR VKGFISLSVP YFPRDPKLKP SDFFKIFGDG LYITQFQKPG RAEAAFAKHD CLSVMKKFLL ITRTDYLVAP PDTEIIDHLE
201: IPSTIPDWIT EEEIQVYAEK FQRSGFTGPL NYYRSMDMNW EILAPWQDSK IVVPTKFIAG DKDIGYEGPN GTMEYVKGEV FKIVVPNLEI VVIEGGHHFI
301: QQEKSEQVSQ EILSFLNKLS KTE
Arabidopsis Description
AT3g51000/F24M12_40 [Source:UniProtKB/TrEMBL;Acc:Q9SD45]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.