Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- peroxisome 1
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G51000.1 | EES00506 | AT2G26740.1 | 21798944 |
| AT3G51000.1 | EES17023 | AT2G26740.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d041217_P002 | Maize | extracellular | 88.24 | 87.96 |
| Zm00001d031204_P003 | Maize | cytosol | 90.09 | 85.34 |
| TraesCS5D01G065000.1 | Wheat | cytosol | 78.64 | 77.91 |
| Os12t0636400-01 | Rice | cytosol, peroxisome | 75.85 | 75.62 |
| TraesCS5A01G053600.1 | Wheat | cytosol | 78.64 | 75.6 |
| TraesCS6A01G029300.1 | Wheat | cytosol | 75.85 | 74.92 |
| EES17493 | Sorghum | cytosol | 74.61 | 73.93 |
| HORVU6Hr1G005400.4 | Barley | cytosol, peroxisome, plastid | 76.16 | 67.77 |
| VIT_15s0021g02470.t01 | Wine grape | cytosol | 55.42 | 56.47 |
| VIT_04s0023g02610.t01 | Wine grape | golgi, mitochondrion, peroxisome | 54.8 | 55.66 |
| EER90578 | Sorghum | cytosol, peroxisome, plastid | 28.48 | 54.44 |
| VIT_03s0038g00090.t01 | Wine grape | cytosol | 21.05 | 53.97 |
| CDY33304 | Canola | peroxisome | 53.25 | 53.09 |
| Bra036841.1-P | Field mustard | peroxisome | 52.01 | 52.66 |
| CDY26530 | Canola | peroxisome | 52.63 | 52.47 |
| Bra038876.1-P | Field mustard | peroxisome | 52.94 | 52.29 |
| KRH69845 | Soybean | cytosol | 52.94 | 52.29 |
| AT3G51000.1 | Thale cress | cytosol | 52.01 | 52.01 |
| CDX77971 | Canola | cytosol, peroxisome, plastid | 51.39 | 51.23 |
| EES00506 | Sorghum | cytosol | 51.39 | 51.08 |
| KRH08141 | Soybean | cytosol | 51.08 | 50.46 |
| HORVU5Hr1G012890.5 | Barley | plastid | 48.92 | 48.32 |
| GSMUA_Achr5P19770_001 | Banana | cytosol | 15.17 | 47.12 |
| CDX73754 | Canola | cytosol, peroxisome, plastid | 24.77 | 46.78 |
| EER96138 | Sorghum | cytosol, peroxisome, plastid | 44.58 | 44.31 |
| EES10243 | Sorghum | cytosol, peroxisome, plastid | 42.72 | 42.72 |
| EES17023 | Sorghum | extracellular, plastid, vacuole | 46.75 | 40.37 |
| EES05333 | Sorghum | cytosol, golgi, peroxisome | 37.77 | 38.85 |
| OQU91562 | Sorghum | cytosol | 37.77 | 38.01 |
| EER94004 | Sorghum | cytosol | 36.84 | 37.78 |
| OQU90681 | Sorghum | peroxisome | 47.68 | 37.38 |
| EES09308 | Sorghum | cytosol, peroxisome, plastid | 35.91 | 36.71 |
| CDX90672 | Canola | mitochondrion | 47.37 | 32.08 |
| CDY28994 | Canola | mitochondrion | 47.68 | 21.36 |
| CDX90673 | Canola | cytosol | 0.31 | 0.43 |
Protein Annotations
| Gene3D:3.40.50.1820 | MapMan:35.2 | UniProt:A0A1Z5R7G8 | InterPro:AB_hydrolase | InterPro:AB_hydrolase_1 | InterPro:Epox_hydrolase-like |
| GO:GO:0003674 | GO:GO:0003824 | InterPro:IPR029058 | EnsemblPlants:OQU79732 | ProteinID:OQU79732 | ProteinID:OQU79732.1 |
| PFAM:PF00561 | PRINTS:PR00412 | PANTHER:PTHR43329 | PANTHER:PTHR43329:SF5 | EnsemblPlantsGene:SORBI_3008G189200 | SUPFAM:SSF53474 |
| UniParc:UPI0001C80864 | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr8:-:62335856..62338106
Molecular Weight (calculated)
35999.7 Da
IEP (calculated)
5.193
GRAVY (calculated)
-0.058
Length
323 amino acids
Sequence
(BLAST)
(BLAST)
001: MDAGEVRHWN ADVNGVSIHV AERGPEDGPA VLLLHGFPEL WLSWRHQMAA LAARGFRALA PDLRGYGDSS APSDPAAYSI FHIVGDVVAL LEHLQLTKVF
101: VVGHDWGAQV AWHLCLFRPD LVRAAVVLGV PYFARHPRPV MEVFAAFGDG FYINQFQEPG RAESSFARYD VATVLKKFYS IEIDNLSAPS GVEIIDFLEA
201: SPSPLPWISE EELGQYAEKF QKSGFTAPLN YYRMWETNWR LLAPWNGAKI TVPVKFIGGD KDIGVQSFGT EKYINSGAFK SIVPDLEVTV IEGHHFLQQE
301: QAERVNSEMI SYLVKFTSQE ASS
101: VVGHDWGAQV AWHLCLFRPD LVRAAVVLGV PYFARHPRPV MEVFAAFGDG FYINQFQEPG RAESSFARYD VATVLKKFYS IEIDNLSAPS GVEIIDFLEA
201: SPSPLPWISE EELGQYAEKF QKSGFTAPLN YYRMWETNWR LLAPWNGAKI TVPVKFIGGD KDIGVQSFGT EKYINSGAFK SIVPDLEVTV IEGHHFLQQE
301: QAERVNSEMI SYLVKFTSQE ASS
001: MTSSVREKKI KTNGIWLNVA EKGDEEGPLV LLLHGFPETW YSWRHQIDFL SSHGYHVVAP DLRGYGDSDS LPSHESYTVS HLVADVIGLL DHYGTTQAFV
101: AGHDWGAIIG WCLCLFRPDR VKGFISLSVP YFPRDPKLKP SDFFKIFGDG LYITQFQKPG RAEAAFAKHD CLSVMKKFLL ITRTDYLVAP PDTEIIDHLE
201: IPSTIPDWIT EEEIQVYAEK FQRSGFTGPL NYYRSMDMNW EILAPWQDSK IVVPTKFIAG DKDIGYEGPN GTMEYVKGEV FKIVVPNLEI VVIEGGHHFI
301: QQEKSEQVSQ EILSFLNKLS KTE
101: AGHDWGAIIG WCLCLFRPDR VKGFISLSVP YFPRDPKLKP SDFFKIFGDG LYITQFQKPG RAEAAFAKHD CLSVMKKFLL ITRTDYLVAP PDTEIIDHLE
201: IPSTIPDWIT EEEIQVYAEK FQRSGFTGPL NYYRSMDMNW EILAPWQDSK IVVPTKFIAG DKDIGYEGPN GTMEYVKGEV FKIVVPNLEI VVIEGGHHFI
301: QQEKSEQVSQ EILSFLNKLS KTE
Arabidopsis Description
AT3g51000/F24M12_40 [Source:UniProtKB/TrEMBL;Acc:Q9SD45]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.