CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 1
mitochondrion 1
peroxisome 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, mitochondrion, peroxisome
BaCelLo:	cytosol
iPSORT:	mitochondrion
MultiLoc:	peroxisome
PProwler:	peroxisome
WoLF PSORT:	peroxisome
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d034740_P001	Maize	mitochondrion	75.49	93.96
TraesCS5D01G507000.1	Wheat	peroxisome	66.5	82.28
TraesCS4A01G366100.1	Wheat	peroxisome	66.75	82.09
Os03t0829100-01	Rice	peroxisome	64.56	79.88
TraesCS5B01G507200.1	Wheat	peroxisome	64.32	79.1
EER90578	Sorghum	cytosol, peroxisome, plastid	27.43	66.86
HORVU7Hr1G075860.1	Barley	mitochondrion	11.41	65.28
EER96138	Sorghum	cytosol, peroxisome, plastid	45.87	58.15
EES00506	Sorghum	cytosol	45.15	57.23
EES10243	Sorghum	cytosol, peroxisome, plastid	44.17	56.35
OQU79732	Sorghum	cytosol	37.38	47.68
EES17493	Sorghum	cytosol	37.14	46.93
EES17023	Sorghum	extracellular, plastid, vacuole	41.99	46.26
EES05333	Sorghum	cytosol, golgi, peroxisome	26.21	34.39
OQU91562	Sorghum	cytosol	26.46	33.96
EES09308	Sorghum	cytosol, peroxisome, plastid	25.24	32.91
EER94004	Sorghum	cytosol	25.0	32.7

Protein Annotations

EnsemblPlants:OQU90681	EnsemblPlantsGene:SORBI_3001G025300	EntrezGene:8080204	Gene3D:3.40.50.1820	GO:GO:0003674	GO:GO:0003824
InterPro:AB_hydrolase	InterPro:AB_hydrolase_1	InterPro:Epox_hydrolase-like	InterPro:IPR029058	PANTHER:PTHR43329	PANTHER:PTHR43329:SF23
PFAM:PF00561	PRINTS:PR00111	PRINTS:PR00412	ProteinID:OQU90681	ProteinID:OQU90681.1	SUPFAM:SSF53474
UniParc:UPI000B8B98D9	UniProt:A0A1Z5S437	MapMan:35.2	:	:	:

Description

hypothetical protein

Coordinates

chr1:+:1970548..1974756

Molecular Weight (calculated)

45739.9 Da

IEP (calculated)

7.106

GRAVY (calculated)

-0.114

Length

412 amino acids

Sequence
(BLAST)

001: MFRQQADINQ TLAYQNSSEH KQAVQIAQLG LAQFAFGPTH MVPALPSDTS RSLAPVPALG SPLPVNSSGA EHDADTPRTM AAMTVRHRQL EANGISMHVA
101: EAGPVDASAP AVLFVHGFPE LWYSWRHQMD YLAARGYRCV APDLRGYGGT TAPPEPSSYT AFHIVGDLVA LLDALHLPQV FVVGHDWGAI VSWNLCLLRP
201: DRVRALVNLS VAFMPRNPGV KPLEYFRAAY GDDYYVCRFQ EPGLEAEFAA FDLKSFFKLA LTLRATGSSV MDLRKMQTYA KQIELPSWLS EEDVNYLASV
301: YSKTGFAGGV NYYRCLDLNW ELMAPWTRAK VQVPTKFIVG DGDLAYHHPG VKSYIHKGGL KRDVPMLEEV VVIKGAGHFI QQERAQEISE HIHDYIKKFE
401: AGVLPPLRVS KL

Best Arabidopsis Sequence Match ( AT4G02340.1 )
(BLAST)

001: MEKIEHTTIS TNGINMHVAS IGSGPVILFV HGFPDLWYSW RHQLVSFAAL GYRAIAPDLR GYGDSDAPPS RESYTILHIV GDLVGLLDSL GVDRVFLVGH
101: DWGAIVAWWL CMIRPDRVNA LVNTSVVFNP RNPSVKPVDA FRALFGDDYY ICRFQEPGEI EEDFAQVDTK KLITRFFTSR NPRPPCIPKS VGFRGLPDPP
201: SLPAWLTEQD VRFYGDKFSQ KGFTGGLNYY RALNLSWELT APWTGLQIKV PVKFIVGDLD ITYNIPGTKE YIHEGGLKKH VPFLQEVVVM EGVGHFLHQE
301: KPDEVTDHIY GFFKKFRTRE TASL

Arabidopsis Description

AT4g02340 protein [Source:UniProtKB/TrEMBL;Acc:O81299]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.