Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, plastid, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- peroxisome 1
- plastid 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES10243 | Sorghum | cytosol, peroxisome, plastid | 83.69 | 84.21 |
| TraesCS3A01G255200.1 | Wheat | peroxisome | 81.85 | 83.39 |
| TraesCS3B01G088600.1 | Wheat | cytosol, peroxisome, plasma membrane | 79.69 | 80.19 |
| TraesCS3D01G074100.1 | Wheat | cytosol, peroxisome, plasma membrane | 79.38 | 79.88 |
| EER90578 | Sorghum | cytosol, peroxisome, plastid | 28.92 | 55.62 |
| EES00506 | Sorghum | cytosol | 50.15 | 50.15 |
| OQU90681 | Sorghum | peroxisome | 58.15 | 45.87 |
| EES17493 | Sorghum | cytosol | 44.92 | 44.79 |
| OQU79732 | Sorghum | cytosol | 44.31 | 44.58 |
| EES17023 | Sorghum | extracellular, plastid, vacuole | 48.62 | 42.25 |
| EES05333 | Sorghum | cytosol, golgi, peroxisome | 33.85 | 35.03 |
| OQU91562 | Sorghum | cytosol | 33.54 | 33.96 |
| EER94004 | Sorghum | cytosol | 32.31 | 33.33 |
| EES09308 | Sorghum | cytosol, peroxisome, plastid | 30.77 | 31.65 |
Protein Annotations
| Gene3D:3.40.50.1820 | MapMan:35.2 | EntrezGene:8081811 | InterPro:AB_hydrolase | InterPro:AB_hydrolase_1 | UniProt:C5X230 |
| EnsemblPlants:EER96138 | ProteinID:EER96138 | ProteinID:EER96138.1 | InterPro:Epox_hydrolase-like | GO:GO:0003674 | GO:GO:0003824 |
| InterPro:IPR029058 | PFAM:PF00561 | PRINTS:PR00111 | PRINTS:PR00412 | PANTHER:PTHR43329 | PANTHER:PTHR43329:SF8 |
| EnsemblPlantsGene:SORBI_3002G091500 | SUPFAM:SSF53474 | unigene:Sbi.5066 | UniParc:UPI0001A83A3A | RefSeq:XP_002459617.1 | SEG:seg |
Description
hypothetical protein
Coordinates
chr2:+:9530774..9532713
Molecular Weight (calculated)
36144.4 Da
IEP (calculated)
6.575
GRAVY (calculated)
-0.022
Length
325 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAATALEGV SVTHRTLDVN GIKIHVAEAG SGTGTAVLFL HGFLELWHSW HHQLRSLSAL GYRCLAPDLR GYGDSTAPPS PSSYTAFHLV GDVVALLDAL
101: ALPRAYVVGQ GWGALLAWHL ATFRPDRVRA LVTMSVAFMP RNPAVRPLEL FRRLYGDGYY LLRLQEPGAM EAEFARMDTR FIFRKILTTR DTGAISLSPE
201: WWGPQDQDIP LPPWLTEEYV DRLAAKFDET GFAGAMNFYR CLDLNWELTA PWTGAKVAVP TKYIAGEHAM SYNYTGVQEY IHKGGLKGDV PGLEEVAVIA
301: GAAHFIHLEK PEEVTEHIYQ FIKKF
101: ALPRAYVVGQ GWGALLAWHL ATFRPDRVRA LVTMSVAFMP RNPAVRPLEL FRRLYGDGYY LLRLQEPGAM EAEFARMDTR FIFRKILTTR DTGAISLSPE
201: WWGPQDQDIP LPPWLTEEYV DRLAAKFDET GFAGAMNFYR CLDLNWELTA PWTGAKVAVP TKYIAGEHAM SYNYTGVQEY IHKGGLKGDV PGLEEVAVIA
301: GAAHFIHLEK PEEVTEHIYQ FIKKF
001: MEKIEHTTIS TNGINMHVAS IGSGPVILFV HGFPDLWYSW RHQLVSFAAL GYRAIAPDLR GYGDSDAPPS RESYTILHIV GDLVGLLDSL GVDRVFLVGH
101: DWGAIVAWWL CMIRPDRVNA LVNTSVVFNP RNPSVKPVDA FRALFGDDYY ICRFQEPGEI EEDFAQVDTK KLITRFFTSR NPRPPCIPKS VGFRGLPDPP
201: SLPAWLTEQD VRFYGDKFSQ KGFTGGLNYY RALNLSWELT APWTGLQIKV PVKFIVGDLD ITYNIPGTKE YIHEGGLKKH VPFLQEVVVM EGVGHFLHQE
301: KPDEVTDHIY GFFKKFRTRE TASL
101: DWGAIVAWWL CMIRPDRVNA LVNTSVVFNP RNPSVKPVDA FRALFGDDYY ICRFQEPGEI EEDFAQVDTK KLITRFFTSR NPRPPCIPKS VGFRGLPDPP
201: SLPAWLTEQD VRFYGDKFSQ KGFTGGLNYY RALNLSWELT APWTGLQIKV PVKFIVGDLD ITYNIPGTKE YIHEGGLKKH VPFLQEVVVM EGVGHFLHQE
301: KPDEVTDHIY GFFKKFRTRE TASL
Arabidopsis Description
AT4g02340 protein [Source:UniProtKB/TrEMBL;Acc:O81299]
SUBAcon: [peroxisome]
SUBAcon: [peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.