Factsheet for TraesCS3B01G088600.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

peroxisome 1
mitochondrion 1
cytosol 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, peroxisome, plasma membrane
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G074100.1	Wheat	cytosol, peroxisome, plasma membrane	98.14	98.14
TraesCS3A01G255200.1	Wheat	peroxisome	92.57	93.73
EER96138	Sorghum	cytosol, peroxisome, plastid	80.19	79.69
EES10243	Sorghum	cytosol, peroxisome, plastid	75.54	75.54
TraesCS1B01G061000.1	Wheat	peroxisome	17.03	54.46
TraesCS5B01G507200.1	Wheat	peroxisome	53.56	51.64
TraesCS3B01G204900.1	Wheat	peroxisome	51.39	51.55
TraesCS3B01G606900.1	Wheat	cytosol	48.92	50.16
TraesCS3B01G055400.1	Wheat	cytosol, peroxisome, plastid	49.54	48.93
TraesCS5B01G507300.1	Wheat	peroxisome	51.7	48.27
TraesCS7B01G129100.1	Wheat	cytosol	47.99	48.14
TraesCS7B01G128800.1	Wheat	cytosol	47.37	47.52
TraesCS7B01G128900.1	Wheat	unclear	47.06	47.2
TraesCS7B01G194000.1	Wheat	cytosol	46.75	46.75
TraesCS1B01G061100.1	Wheat	cytosol	22.6	42.94
TraesCS2B01G556900.1	Wheat	peroxisome	29.72	30.77
TraesCS1B01G186600.1	Wheat	cytosol, peroxisome, plastid	29.1	30.23
TraesCS1B01G186700.1	Wheat	cytosol	29.41	29.87

Protein Annotations

EnsemblPlants:TraesCS3B01G088600.1	EnsemblPlantsGene:TraesCS3B01G088600	Gene3D:3.40.50.1820	GO:GO:0003674	GO:GO:0003824	InterPro:AB_hydrolase
InterPro:AB_hydrolase_1	InterPro:Epox_hydrolase-like	InterPro:IPR029058	PANTHER:PTHR43329	PANTHER:PTHR43329:SF8	PFAM:PF00561
PRINTS:PR00111	PRINTS:PR00412	SEG:seg	SUPFAM:SSF53474	MapMan:35.2	:

Description

No Description!

Coordinates

chr3B:-:56749294..56750379

Molecular Weight (calculated)

36078.5 Da

IEP (calculated)

6.372

GRAVY (calculated)

0.002

Length

323 amino acids

Sequence
(BLAST)

001: MATSMALDGV THRTLEVNGI KIHVGEIGNG AAGTVLLLHG FLELWCSWHH QLRFLSERGY RCLAPDLRGY GDSAAPISPS SYSAFHIVGD LVGLLDALSL
101: PQVFVVGQGW GALLAWNLCM FRPERVRALV NMSVAFMPRN PSVKPLELFR RLYGDGYYLL RLQEHGVMEA EFAQMDTKFI FKKLLTTRDT GAISLSKEWW
201: GPMDEDIPLP PWVSQDYVGH LAAKFDQTGF SGAMNFYRCL DLNWELSAPW TAAKVTVPTK FMAGESAMSY NYTGVQEYIH KGGLKGDVPG LEEVVVIAGG
301: AHYIHLEKAE EVNEHIYDFL KKF

Best Arabidopsis Sequence Match ( AT2G26740.1 )
(BLAST)

001: MEHRKVRGNG IDIHVAIQGP SDGPIVLLLH GFPELWYSWR HQIPGLAARG YRAVAPDLRG YGDSDAPAEI SSYTCFNIVG DLIAVISALT ASEDEKVFVV
101: GHDWGALIAW YLCLFRPDRV KALVNLSVPF SFRPTDPSVK PVDRMRAFYG DDYYICRFQE FGDVEAEIAE VGTERVMKRL LTYRTPGPVI IPKDKSFWGS
201: KGETIPLPSW LTEEDVAYFV SKFEEKGFSG PVNYYRNFNR NNELLGPWVG SKIQVPTKFV IGELDLVYYM PGVKEYIHGP QFKEDVPLLE EPVVMEGVAH
301: FINQEKPQEI LQIILDFISK F

Arabidopsis Description

ATSEHATsEH [Source:UniProtKB/TrEMBL;Acc:Q42566]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.