Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- peroxisome 1
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G170600.1 | Wheat | cytosol | 96.23 | 96.84 |
| TraesCS1D01G168300.4 | Wheat | peroxisome | 94.97 | 94.38 |
| EES09308 | Sorghum | cytosol, peroxisome, plastid | 86.48 | 87.03 |
| Os10t0498500-00 | Rice | cytosol | 69.5 | 82.16 |
| Os10t0498200-01 | Rice | cytosol, peroxisome, plastid | 81.76 | 81.76 |
| HORVU1Hr1G044740.2 | Barley | plastid | 94.65 | 76.98 |
| Os10t0498300-01 | Rice | cytosol, peroxisome, plastid | 78.3 | 75.0 |
| TraesCS1B01G186600.1 | Wheat | cytosol, peroxisome, plastid | 72.96 | 74.6 |
| TraesCS2B01G556900.1 | Wheat | peroxisome | 68.55 | 69.87 |
| GSMUA_Achr8P14130_001 | Banana | cytosol | 63.84 | 62.85 |
| KRH25591 | Soybean | cytosol | 57.86 | 58.6 |
| VIT_12s0059g00230.t01 | Wine grape | cytosol, peroxisome, vacuole | 56.92 | 57.83 |
| PGSC0003DMT400055784 | Potato | cytosol, peroxisome, plastid | 56.29 | 57.56 |
| KRH22405 | Soybean | cytoskeleton, cytosol, peroxisome | 56.29 | 57.56 |
| VIT_12s0059g00220.t01 | Wine grape | peroxisome | 56.6 | 57.51 |
| VIT_12s0059g00210.t01 | Wine grape | peroxisome | 56.29 | 57.19 |
| KRH55995 | Soybean | nucleus | 56.6 | 57.14 |
| KRH55994 | Soybean | cytosol | 55.66 | 56.37 |
| Solyc02g078570.2.1 | Tomato | extracellular | 55.66 | 56.19 |
| KRH25546 | Soybean | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 58.18 | 54.57 |
| KRH26931 | Soybean | cytoskeleton, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole | 47.17 | 53.76 |
| KRH25547 | Soybean | cytosol | 24.84 | 52.67 |
| KRH25548 | Soybean | cytosol | 26.1 | 47.16 |
| KRH37569 | Soybean | cytosol | 26.42 | 46.41 |
| TraesCS1B01G061000.1 | Wheat | peroxisome | 14.15 | 44.55 |
| KRG94755 | Soybean | cytosol, peroxisome, plastid | 39.31 | 42.96 |
| TraesCS7B01G129100.1 | Wheat | cytosol | 35.85 | 35.4 |
| TraesCS7B01G128900.1 | Wheat | unclear | 34.91 | 34.47 |
| TraesCS7B01G128800.1 | Wheat | cytosol | 34.59 | 34.16 |
| TraesCS7B01G194000.1 | Wheat | cytosol | 32.7 | 32.2 |
| TraesCS3B01G204900.1 | Wheat | peroxisome | 32.08 | 31.68 |
| TraesCS3B01G606900.1 | Wheat | cytosol | 30.5 | 30.79 |
| TraesCS3B01G055400.1 | Wheat | cytosol, peroxisome, plastid | 31.13 | 30.28 |
| TraesCS3B01G088600.1 | Wheat | cytosol, peroxisome, plasma membrane | 29.87 | 29.41 |
| TraesCS5B01G507200.1 | Wheat | peroxisome | 30.19 | 28.66 |
| TraesCS5B01G507300.1 | Wheat | peroxisome | 29.87 | 27.46 |
| TraesCS1B01G061100.1 | Wheat | cytosol | 13.52 | 25.29 |
Protein Annotations
| EnsemblPlants:TraesCS1B01G186700.1 | EnsemblPlantsGene:TraesCS1B01G186700 | Gene3D:3.40.50.1820 | GO:GO:0003674 | GO:GO:0003824 | InterPro:AB_hydrolase |
| InterPro:AB_hydrolase_1 | InterPro:Epox_hydrolase-like | InterPro:IPR029058 | PANTHER:PTHR43329 | PANTHER:PTHR43329:SF3 | PFAM:PF00561 |
| PRINTS:PR00111 | PRINTS:PR00412 | SUPFAM:SSF53474 | MapMan:35.2 | : | : |
Description
No Description!
Coordinates
chr1B:+:333625656..333627682
Molecular Weight (calculated)
35897.1 Da
IEP (calculated)
4.984
GRAVY (calculated)
-0.105
Length
318 amino acids
Sequence
(BLAST)
(BLAST)
001: MATVEQQQQI EHSHLAIRGL SLHVAQAGTG ELGTVLFLHG FPEIWYSWRH QMLAVAAAGY RAIAPDWRGY GLSDQPPEPE AAAYSDLTED LLAVLDALSV
101: PKAYLVAKDF GAMLAYDFAL RHPSRTCGVM CLGIPFLHGG SSFTAMPEGF YILRWREPGR AEADFGRYDV KRVVRTIYIL FSRSEIPIAK EDQEIMDLAD
201: LSTPLPEWFT EEDLAIYTSL YEKSGFVYPL QMPYRSLHKR QPIEDPKFEV PVFVAMGEKD YVIKFPGVEA VLKNGTMEKF APDLKITYIP EGSHFVQEQF
301: PDKVNEFLLG FLKDHPVA
101: PKAYLVAKDF GAMLAYDFAL RHPSRTCGVM CLGIPFLHGG SSFTAMPEGF YILRWREPGR AEADFGRYDV KRVVRTIYIL FSRSEIPIAK EDQEIMDLAD
201: LSTPLPEWFT EEDLAIYTSL YEKSGFVYPL QMPYRSLHKR QPIEDPKFEV PVFVAMGEKD YVIKFPGVEA VLKNGTMEKF APDLKITYIP EGSHFVQEQF
301: PDKVNEFLLG FLKDHPVA
001: MEHRKVRGNG IDIHVAIQGP SDGPIVLLLH GFPELWYSWR HQIPGLAARG YRAVAPDLRG YGDSDAPAEI SSYTCFNIVG DLIAVISALT ASEDEKVFVV
101: GHDWGALIAW YLCLFRPDRV KALVNLSVPF SFRPTDPSVK PVDRMRAFYG DDYYICRFQE FGDVEAEIAE VGTERVMKRL LTYRTPGPVI IPKDKSFWGS
201: KGETIPLPSW LTEEDVAYFV SKFEEKGFSG PVNYYRNFNR NNELLGPWVG SKIQVPTKFV IGELDLVYYM PGVKEYIHGP QFKEDVPLLE EPVVMEGVAH
301: FINQEKPQEI LQIILDFISK F
101: GHDWGALIAW YLCLFRPDRV KALVNLSVPF SFRPTDPSVK PVDRMRAFYG DDYYICRFQE FGDVEAEIAE VGTERVMKRL LTYRTPGPVI IPKDKSFWGS
201: KGETIPLPSW LTEEDVAYFV SKFEEKGFSG PVNYYRNFNR NNELLGPWVG SKIQVPTKFV IGELDLVYYM PGVKEYIHGP QFKEDVPLLE EPVVMEGVAH
301: FINQEKPQEI LQIILDFISK F
Arabidopsis Description
ATSEHATsEH [Source:UniProtKB/TrEMBL;Acc:Q42566]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.