Factsheet for TraesCS1A01G170600.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

peroxisome 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G186700.1	Wheat	cytosol	96.84	96.23
TraesCS1D01G168300.4	Wheat	peroxisome	95.57	94.38
EES09308	Sorghum	cytosol, peroxisome, plastid	86.71	86.71
Os10t0498500-00	Rice	cytosol	69.3	81.41
Os10t0498200-01	Rice	cytosol, peroxisome, plastid	81.33	80.82
HORVU1Hr1G044740.2	Barley	plastid	95.25	76.98
TraesCS1A01G170700.1	Wheat	cytosol, peroxisome, plastid	73.73	74.92
Os10t0498300-01	Rice	cytosol, peroxisome, plastid	78.48	74.7
GSMUA_Achr8P14130_001	Banana	cytosol	63.61	62.23
KRH25591	Soybean	cytosol	57.91	58.28
PGSC0003DMT400055784	Potato	cytosol, peroxisome, plastid	56.96	57.88
VIT_12s0059g00230.t01	Wine grape	cytosol, peroxisome, vacuole	57.28	57.83
KRH22405	Soybean	cytoskeleton, cytosol, peroxisome	56.33	57.23
VIT_12s0059g00220.t01	Wine grape	peroxisome	56.65	57.19
VIT_12s0059g00210.t01	Wine grape	peroxisome	56.33	56.87
KRH55995	Soybean	nucleus	56.65	56.83
KRH55994	Soybean	cytosol	55.7	56.05
Solyc02g078570.2.1	Tomato	extracellular	55.7	55.87
TraesCS2A01G526600.1	Wheat	plastid	40.82	55.84
KRH26931	Soybean	cytoskeleton, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	47.47	53.76
KRH25546	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	57.59	53.69
KRH25547	Soybean	cytosol	24.05	50.67
KRH25548	Soybean	cytosol	25.32	45.45
KRH37569	Soybean	cytosol	25.95	45.3
KRG94755	Soybean	cytosol, peroxisome, plastid	38.92	42.27
TraesCS5A01G053600.1	Wheat	cytosol	39.87	37.5
TraesCS6A01G029300.1	Wheat	cytosol	37.66	36.39
TraesCS3A01G538800.2	Wheat	cytosol	28.48	34.62
TraesCS7A01G225600.1	Wheat	cytosol	34.49	33.85
TraesCS7A01G222400.1	Wheat	cytosol	32.28	33.66
TraesCS7A01G222600.1	Wheat	golgi, unclear	36.08	32.39
TraesCS3A01G175200.2	Wheat	peroxisome	31.96	31.37
TraesCS4A01G366100.1	Wheat	peroxisome	32.28	30.45
TraesCS3A01G255200.1	Wheat	peroxisome	30.38	30.09
TraesCS3A01G536800.1	Wheat	cytosol	30.38	29.36
TraesCS4A01G366000.1	Wheat	peroxisome	30.7	28.2

Protein Annotations

EnsemblPlants:TraesCS1A01G170600.1	EnsemblPlantsGene:TraesCS1A01G170600	Gene3D:3.40.50.1820	GO:GO:0003674	GO:GO:0003824	InterPro:AB_hydrolase
InterPro:AB_hydrolase_1	InterPro:Epox_hydrolase-like	InterPro:IPR029058	PANTHER:PTHR43329	PANTHER:PTHR43329:SF3	PFAM:PF12697
PRINTS:PR00111	PRINTS:PR00412	SEG:seg	SUPFAM:SSF53474	MapMan:35.2	:

Description

No Description!

Coordinates

chr1A:-:305004105..305006364

Molecular Weight (calculated)

35658.8 Da

IEP (calculated)

5.094

GRAVY (calculated)

-0.099

Length

316 amino acids

Sequence
(BLAST)

001: MAMVEQRIEH SHLAIRGLNL HVAQAGTGEL GTVLFLHGFP EIWYSWRHQM LAVAAAGYRA IAPDWRGYGL SDQPPEPEAA AYSDLTEDLL ALLDALSVPK
101: AYLVAKDFGA MLAYDFALRH PSRTCGVMCL GIPFLHGGSS FTAMPEGFYI LRWREPGRAE ADFGRYDVKR VVHTIYILFS RSEIPTAKED QEITDLADLS
201: TPLPEWFTEE DLAVYTSLYE KSGFVYPLQM PYRSLHKRQP IEDPKFEVPV FVVMGEKDYV IKFPGVEAVL KNGTMEKFAP DLKITYIPEG SHFVQEQFPD
301: KVNELLLGFL KDHPVA

Best Arabidopsis Sequence Match ( AT2G26740.1 )
(BLAST)

001: MEHRKVRGNG IDIHVAIQGP SDGPIVLLLH GFPELWYSWR HQIPGLAARG YRAVAPDLRG YGDSDAPAEI SSYTCFNIVG DLIAVISALT ASEDEKVFVV
101: GHDWGALIAW YLCLFRPDRV KALVNLSVPF SFRPTDPSVK PVDRMRAFYG DDYYICRFQE FGDVEAEIAE VGTERVMKRL LTYRTPGPVI IPKDKSFWGS
201: KGETIPLPSW LTEEDVAYFV SKFEEKGFSG PVNYYRNFNR NNELLGPWVG SKIQVPTKFV IGELDLVYYM PGVKEYIHGP QFKEDVPLLE EPVVMEGVAH
301: FINQEKPQEI LQIILDFISK F

Arabidopsis Description

ATSEHATsEH [Source:UniProtKB/TrEMBL;Acc:Q42566]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.