Factsheet for PGSC0003DMT400055784

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, peroxisome, plastid

Predictor Summary:

plastid 2
mitochondrion 2
peroxisome 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_12s0059g00230.t01	Wine grape	cytosol, peroxisome, vacuole	67.52	67.09
VIT_12s0059g00220.t01	Wine grape	peroxisome	66.88	66.45
VIT_12s0059g00210.t01	Wine grape	peroxisome	66.88	66.45
KRH22405	Soybean	cytoskeleton, cytosol, peroxisome	64.95	64.95
KRH25591	Soybean	cytosol	65.27	64.65
PGSC0003DMT400057633	Potato	peroxisome	64.31	63.49
KRH55994	Soybean	cytosol	63.67	63.06
KRH55995	Soybean	nucleus	63.34	62.54
PGSC0003DMT400057630	Potato	peroxisome, plasma membrane, plastid	62.38	59.15
GSMUA_Achr8P14130_001	Banana	cytosol	61.41	59.13
KRH25546	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	64.31	59.0
KRH26931	Soybean	cytoskeleton, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	52.73	58.78
EES05333	Sorghum	cytosol, golgi, peroxisome	57.88	57.32
HORVU1Hr1G044770.1	Barley	cytosol, peroxisome	57.23	57.05
TraesCS1A01G170600.1	Wheat	cytosol	57.88	56.96
TraesCS1D01G168400.1	Wheat	cytosol, peroxisome, plastid	56.91	56.91
TraesCS1A01G170700.1	Wheat	cytosol, peroxisome, plastid	56.91	56.91
TraesCS1D01G168300.4	Wheat	peroxisome	58.2	56.56
Os10t0498500-00	Rice	cytosol	48.87	56.51
TraesCS1B01G186700.1	Wheat	cytosol	57.56	56.29
TraesCS1B01G186600.1	Wheat	cytosol, peroxisome, plastid	56.27	56.27
Zm00001d013934_P001	Maize	extracellular	56.91	56.19
TraesCS2B01G556900.1	Wheat	peroxisome	56.27	56.09
EES09308	Sorghum	cytosol, peroxisome, plastid	56.91	56.01
Os10t0498200-01	Rice	cytosol, peroxisome, plastid	56.91	55.66
KRH25547	Soybean	cytosol	26.69	55.33
TraesCS2D01G529300.1	Wheat	peroxisome	54.34	55.05
Os10t0498000-01	Rice	golgi, mitochondrion, peroxisome	54.98	54.98
OQU91562	Sorghum	cytosol	56.59	54.83
EER94004	Sorghum	cytosol	54.98	54.29
Zm00001d032570_P002	Maize	cytosol	54.98	53.6
Os10t0498300-01	Rice	cytosol, peroxisome, plastid	55.31	51.81
KRH37569	Soybean	cytosol	29.9	51.38
KRH25548	Soybean	cytosol	28.94	51.14
HORVU2Hr1G116250.4	Barley	peroxisome	47.27	50.69
KRG94755	Soybean	cytosol, peroxisome, plastid	45.66	48.8
HORVU1Hr1G044740.2	Barley	plastid	57.23	45.52
TraesCS2A01G526600.1	Wheat	plastid	31.19	41.99
PGSC0003DMT400081311	Potato	cytosol	37.3	36.48
PGSC0003DMT400060254	Potato	extracellular	37.3	36.14
PGSC0003DMT400046206	Potato	peroxisome	36.66	35.85
PGSC0003DMT400060250	Potato	cytosol	36.66	35.51
PGSC0003DMT400063718	Potato	cytosol	35.37	35.03
PGSC0003DMT400029422	Potato	cytosol	36.01	34.46
PGSC0003DMT400011790	Potato	cytosol	35.69	34.37
PGSC0003DMT400029420	Potato	cytosol	36.66	34.13
HORVU2Hr1G116180.3	Barley	peroxisome	24.12	33.19
Os10t0498100-01	Rice	vacuole	30.55	30.74

Protein Annotations

EntrezGene:102598609	Gene3D:3.40.50.1820	MapMan:35.2	InterPro:AB_hydrolase	InterPro:AB_hydrolase_1	InterPro:Epox_hydrolase-like
GO:GO:0003674	GO:GO:0003824	InterPro:IPR029058	UniProt:M1BYI8	PFAM:PF00561	EnsemblPlantsGene:PGSC0003DMG400021666
PGSC:PGSC0003DMG400021666	EnsemblPlants:PGSC0003DMT400055784	PRINTS:PR00111	PRINTS:PR00412	PANTHER:PTHR43329	PANTHER:PTHR43329:SF19
SUPFAM:SSF53474	UniParc:UPI00029604EC	RefSeq:XP_006366021.2	SEG:seg	:	:

Description

Epoxide hydrolase [Source:PGSC_GENE;Acc:PGSC0003DMG400021666]

Coordinates

chr10:-:3969079..3973184

Molecular Weight (calculated)

35257.4 Da

IEP (calculated)

4.771

GRAVY (calculated)

0.036

Length

311 amino acids

Sequence
(BLAST)

001: MEKIHHNYVN VRGLKLHFAE IGTGPVVVFL HGFPEIWYSW RHQMIAVADA GFRAIAPDFR GYGLSELPTY PELTTFKDLV DDLLDMIDSL DIHKVFLVGK
101: DFGARVVFHF ALLHPNRVLA LATLGVPFLL TGPGTFPQDL LPKGFYVLRW QEPGRAEADF GRFDTKTVVK NIYILFSGSE LPAAKDDEEI MDLVDPSTPL
201: PAWFTEEDLA NYASLYENSG FQTALQVPYR AWLEEYGVED IKIKVPSLLV MGEKDYALKF GGLEHFISSG MVKEYVPNLE ITFLPEGSHF VQEQFPQQVN
301: QLIINFLNKL V

Best Arabidopsis Sequence Match ( AT2G26740.1 )
(BLAST)

001: MEHRKVRGNG IDIHVAIQGP SDGPIVLLLH GFPELWYSWR HQIPGLAARG YRAVAPDLRG YGDSDAPAEI SSYTCFNIVG DLIAVISALT ASEDEKVFVV
101: GHDWGALIAW YLCLFRPDRV KALVNLSVPF SFRPTDPSVK PVDRMRAFYG DDYYICRFQE FGDVEAEIAE VGTERVMKRL LTYRTPGPVI IPKDKSFWGS
201: KGETIPLPSW LTEEDVAYFV SKFEEKGFSG PVNYYRNFNR NNELLGPWVG SKIQVPTKFV IGELDLVYYM PGVKEYIHGP QFKEDVPLLE EPVVMEGVAH
301: FINQEKPQEI LQIILDFISK F

Arabidopsis Description

ATSEHATsEH [Source:UniProtKB/TrEMBL;Acc:Q42566]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.