Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU2Hr1G116250.4 | Barley | peroxisome | 69.7 | 55.52 |
| TraesCS2B01G556900.1 | Wheat | peroxisome | 73.59 | 54.49 |
| TraesCS2D01G529300.1 | Wheat | peroxisome | 69.7 | 52.44 |
| Zm00001d013934_P001 | Maize | extracellular | 58.44 | 42.86 |
| EES05333 | Sorghum | cytosol, golgi, peroxisome | 56.71 | 41.72 |
| OQU91562 | Sorghum | cytosol | 57.58 | 41.43 |
| Zm00001d032570_P002 | Maize | cytosol | 57.14 | 41.38 |
| EER94004 | Sorghum | cytosol | 56.28 | 41.27 |
| TraesCS1A01G170600.1 | Wheat | cytosol | 55.84 | 40.82 |
| TraesCS1A01G170700.1 | Wheat | cytosol, peroxisome, plastid | 54.55 | 40.51 |
| KRH25547 | Soybean | cytosol | 25.54 | 39.33 |
| GSMUA_Achr8P14130_001 | Banana | cytosol | 48.48 | 34.67 |
| KRH25548 | Soybean | cytosol | 25.97 | 34.09 |
| VIT_12s0059g00230.t01 | Wine grape | cytosol, peroxisome, vacuole | 42.86 | 31.63 |
| VIT_12s0059g00210.t01 | Wine grape | peroxisome | 42.86 | 31.63 |
| VIT_12s0059g00220.t01 | Wine grape | peroxisome | 42.42 | 31.31 |
| PGSC0003DMT400055784 | Potato | cytosol, peroxisome, plastid | 41.99 | 31.19 |
| KRH25591 | Soybean | cytosol | 41.56 | 30.57 |
| KRH22405 | Soybean | cytoskeleton, cytosol, peroxisome | 40.69 | 30.23 |
| KRH55995 | Soybean | nucleus | 41.13 | 30.16 |
| KRH55994 | Soybean | cytosol | 40.26 | 29.62 |
| KRH26931 | Soybean | cytoskeleton, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole | 35.06 | 29.03 |
| Solyc02g078570.2.1 | Tomato | extracellular | 38.96 | 28.57 |
| KRH37569 | Soybean | cytosol | 21.64 | 27.62 |
| KRH25546 | Soybean | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 40.26 | 27.43 |
| KRG94755 | Soybean | cytosol, peroxisome, plastid | 25.97 | 20.62 |
| TraesCS5A01G053600.1 | Wheat | cytosol | 26.41 | 18.15 |
| TraesCS3A01G538800.2 | Wheat | cytosol | 20.35 | 18.08 |
| TraesCS6A01G029300.1 | Wheat | cytosol | 25.54 | 18.04 |
| TraesCS7A01G225600.1 | Wheat | cytosol | 23.38 | 16.77 |
| TraesCS3A01G255200.1 | Wheat | peroxisome | 22.94 | 16.61 |
| TraesCS7A01G222600.1 | Wheat | golgi, unclear | 25.11 | 16.48 |
| TraesCS3A01G536800.1 | Wheat | cytosol | 21.64 | 15.29 |
| TraesCS3A01G175200.2 | Wheat | peroxisome | 21.21 | 15.22 |
| TraesCS7A01G222400.1 | Wheat | cytosol | 19.48 | 14.85 |
| TraesCS4A01G366000.1 | Wheat | peroxisome | 22.08 | 14.83 |
| TraesCS4A01G366100.1 | Wheat | peroxisome | 20.78 | 14.33 |
| Os10t0498100-01 | Rice | vacuole | 18.61 | 13.92 |
Protein Annotations
| EnsemblPlants:TraesCS2A01G526600.1 | EnsemblPlantsGene:TraesCS2A01G526600 | Gene3D:3.40.50.1820 | InterPro:AB_hydrolase | InterPro:IPR029058 | PANTHER:PTHR43329 |
| PANTHER:PTHR43329:SF3 | SEG:seg | SUPFAM:SSF53474 | MapMan:35.2 | : | : |
Description
No Description!
Coordinates
chr2A:+:746775492..746793958
Molecular Weight (calculated)
25645.5 Da
IEP (calculated)
8.594
GRAVY (calculated)
-0.469
Length
231 amino acids
Sequence
(BLAST)
(BLAST)
001: MASRRYGTRG ATRCRPWPPQ GTAPSRRTAA GTACRTSRRS TRSPSGRTSS PTCSPSSMPS PSPRAYFQQR WRQPGQAEAD FGRYNIRCVV RTIYVLFSGR
101: EIPAAEQGQE AMDLADGSAP LPEWFTEEDL DVYAALYENS GFGYPIKMPY GSLDKMATQL EARFEVPVLM VMGEDYVMKL PGFEAAVRGG MMAGFAPDLK
201: VAFVPEGRHF VQEQFPTQVN ELLLGFLKDH P
101: EIPAAEQGQE AMDLADGSAP LPEWFTEEDL DVYAALYENS GFGYPIKMPY GSLDKMATQL EARFEVPVLM VMGEDYVMKL PGFEAAVRGG MMAGFAPDLK
201: VAFVPEGRHF VQEQFPTQVN ELLLGFLKDH P
001: MTSSVREKKI KTNGIWLNVA EKGDEEGPLV LLLHGFPETW YSWRHQIDFL SSHGYHVVAP DLRGYGDSDS LPSHESYTVS HLVADVIGLL DHYGTTQAFV
101: AGHDWGAIIG WCLCLFRPDR VKGFISLSVP YFPRDPKLKP SDFFKIFGDG LYITQFQKPG RAEAAFAKHD CLSVMKKFLL ITRTDYLVAP PDTEIIDHLE
201: IPSTIPDWIT EEEIQVYAEK FQRSGFTGPL NYYRSMDMNW EILAPWQDSK IVVPTKFIAG DKDIGYEGPN GTMEYVKGEV FKIVVPNLEI VVIEGGHHFI
301: QQEKSEQVSQ EILSFLNKLS KTE
101: AGHDWGAIIG WCLCLFRPDR VKGFISLSVP YFPRDPKLKP SDFFKIFGDG LYITQFQKPG RAEAAFAKHD CLSVMKKFLL ITRTDYLVAP PDTEIIDHLE
201: IPSTIPDWIT EEEIQVYAEK FQRSGFTGPL NYYRSMDMNW EILAPWQDSK IVVPTKFIAG DKDIGYEGPN GTMEYVKGEV FKIVVPNLEI VVIEGGHHFI
301: QQEKSEQVSQ EILSFLNKLS KTE
Arabidopsis Description
AT3g51000/F24M12_40 [Source:UniProtKB/TrEMBL;Acc:Q9SD45]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.