Factsheet for VIT_12s0059g00230.t01

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, vacuole, cytosol

Predictor Summary:

cytosol 2
peroxisome 1
plastid 1
mitochondrion 1
vacuole 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_12s0059g00220.t01	Wine grape	peroxisome	93.29	93.29
VIT_12s0059g00210.t01	Wine grape	peroxisome	86.26	86.26
KRH22405	Soybean	cytoskeleton, cytosol, peroxisome	70.61	71.06
KRH55995	Soybean	nucleus	69.01	68.57
KRH25591	Soybean	cytosol	68.69	68.47
PGSC0003DMT400055784	Potato	cytosol, peroxisome, plastid	67.09	67.52
KRH55994	Soybean	cytosol	67.73	67.52
VIT_00s0370g00070.t01	Wine grape	cytosol, peroxisome, plastid	65.18	65.81
VIT_00s0370g00060.t01	Wine grape	peroxisome, plasma membrane, plastid	62.94	63.34
KRH25546	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	68.37	63.13
KRH26931	Soybean	cytoskeleton, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	55.59	62.37
Solyc02g078570.2.1	Tomato	extracellular	60.7	60.32
EES05333	Sorghum	cytosol, golgi, peroxisome	60.06	59.87
GSMUA_Achr8P14130_001	Banana	cytosol	61.02	59.13
Zm00001d032570_P002	Maize	cytosol	59.42	58.31
TraesCS1D01G168400.1	Wheat	cytosol, peroxisome, plastid	57.83	58.2
HORVU1Hr1G044770.1	Barley	cytosol, peroxisome	57.83	58.01
Zm00001d013934_P001	Maize	extracellular	58.15	57.78
EES09308	Sorghum	cytosol, peroxisome, plastid	58.15	57.59
TraesCS1A01G170700.1	Wheat	cytosol, peroxisome, plastid	57.19	57.56
TraesCS1B01G186600.1	Wheat	cytosol, peroxisome, plastid	57.19	57.56
TraesCS1A01G170600.1	Wheat	cytosol	57.83	57.28
Os10t0498200-01	Rice	cytosol, peroxisome, plastid	58.15	57.23
TraesCS1D01G168300.4	Wheat	peroxisome	58.47	57.19
TraesCS1B01G186700.1	Wheat	cytosol	57.83	56.92
EER94004	Sorghum	cytosol	57.19	56.83
KRH25547	Soybean	cytosol	27.16	56.67
Os10t0498500-00	Rice	cytosol	48.56	56.51
TraesCS2B01G556900.1	Wheat	peroxisome	56.23	56.41
OQU91562	Sorghum	cytosol	57.83	56.39
KRH37569	Soybean	cytosol	32.59	56.35
TraesCS2D01G529300.1	Wheat	peroxisome	54.63	55.7
Os10t0498000-01	Rice	golgi, mitochondrion, peroxisome	54.95	55.31
Os10t0498300-01	Rice	cytosol, peroxisome, plastid	56.87	53.61
HORVU2Hr1G116250.4	Barley	peroxisome	49.52	53.45
KRG94755	Soybean	cytosol, peroxisome, plastid	49.52	53.26
KRH25548	Soybean	cytosol	29.71	52.84
HORVU1Hr1G044740.2	Barley	plastid	57.19	45.78
TraesCS2A01G526600.1	Wheat	plastid	31.63	42.86
VIT_04s0023g02610.t01	Wine grape	golgi, mitochondrion, peroxisome	38.34	37.74
VIT_15s0021g02470.t01	Wine grape	cytosol	38.02	37.54
VIT_03s0038g00100.t01	Wine grape	cytosol, mitochondrion, plastid, vacuole	13.74	37.39
VIT_14s0060g01940.t01	Wine grape	cytosol	37.7	37.22
HORVU2Hr1G116180.3	Barley	peroxisome	26.52	36.73
VIT_07s0005g00700.t01	Wine grape	cytosol	37.06	36.59
VIT_05s0077g02030.t01	Wine grape	mitochondrion	10.54	35.11
VIT_05s0077g02020.t01	Wine grape	cytosol	35.46	35.02
VIT_05s0077g01990.t01	Wine grape	cytoskeleton, cytosol, peroxisome	34.19	33.75
Os10t0498100-01	Rice	vacuole	33.23	33.66
VIT_05s0077g02010.t01	Wine grape	cytosol	33.55	33.12
VIT_05s0077g02000.t01	Wine grape	cytosol, mitochondrion, peroxisome	17.57	28.8
VIT_03s0038g00090.t01	Wine grape	cytosol	10.86	26.98

Protein Annotations

EntrezGene:100251755	wikigene:100251755	EntrezGene:109121449	Gene3D:3.40.50.1820	MapMan:35.2	InterPro:AB_hydrolase
InterPro:AB_hydrolase_1	EMBL:AM425234	ProteinID:CAN66672	ProteinID:CAN66672.1	ProteinID:CBI28771	ProteinID:CBI28771.3
UniProt:D7TE48	InterPro:Epox_hydrolase-like	EMBL:FN595765	GO:GO:0003674	GO:GO:0003824	InterPro:IPR029058
EntrezGene:LOC100251755	wikigene:LOC100251755	PFAM:PF00561	PRINTS:PR00111	PRINTS:PR00412	PANTHER:PTHR43329
PANTHER:PTHR43329:SF6	SUPFAM:SSF53474	UniParc:UPI00015CA7D9	ArrayExpress:VIT_12s0059g00230	EnsemblPlantsGene:VIT_12s0059g00230	EnsemblPlants:VIT_12s0059g00230.t01
unigene:Vvi.14138	RefSeq:XP_002263485	RefSeq:XP_002263485.1	RefSeq:XP_019079158.1	SEG:seg	:

Description

No Description!

Coordinates

chr12:-:5115116..5117511

Molecular Weight (calculated)

35373.8 Da

IEP (calculated)

5.083

GRAVY (calculated)

-0.036

Length

313 amino acids

Sequence
(BLAST)

001: MEQIQHKYVE VSGLKLHVAE LGTGPKVVLF LHGFPEIWYS WRHQMIAAAA AGYRAIAFDF RGYGLSQQPP EPEKASFDDL VVDVIGIMDS FGISKAFLVG
101: KDSGAFPAFH VAVLHPERVS GVVTLGIPFM LPGVSVIPMH LLPKGFYILR WQEPGRAEAD FGRFDVKTVI RNIYMLFCRS ELQVASDDQE IMDLADPSAP
201: LPPWFTEEDL KVYSSLYENS GFRTPLQVPY RTLGIDCGVK DPKITAPGML IMGEKDYVLK FPGMEEYIRS EKVKEFMPNL EIIFHEEGNH FVQEQFPEEV
301: NQLVITFLNK HST

Best Arabidopsis Sequence Match ( AT2G26740.1 )
(BLAST)

001: MEHRKVRGNG IDIHVAIQGP SDGPIVLLLH GFPELWYSWR HQIPGLAARG YRAVAPDLRG YGDSDAPAEI SSYTCFNIVG DLIAVISALT ASEDEKVFVV
101: GHDWGALIAW YLCLFRPDRV KALVNLSVPF SFRPTDPSVK PVDRMRAFYG DDYYICRFQE FGDVEAEIAE VGTERVMKRL LTYRTPGPVI IPKDKSFWGS
201: KGETIPLPSW LTEEDVAYFV SKFEEKGFSG PVNYYRNFNR NNELLGPWVG SKIQVPTKFV IGELDLVYYM PGVKEYIHGP QFKEDVPLLE EPVVMEGVAH
301: FINQEKPQEI LQIILDFISK F

Arabidopsis Description

ATSEHATsEH [Source:UniProtKB/TrEMBL;Acc:Q42566]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.