Factsheet for VIT_03s0038g00090.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
nucleus 1
cytosol 4
mitochondrion 2
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_15s0021g02470.t01	Wine grape	cytosol	88.1	35.02
VIT_05s0077g02000.t01	Wine grape	cytosol, mitochondrion, peroxisome	38.89	25.65
VIT_05s0077g02030.t01	Wine grape	mitochondrion	18.25	24.47
VIT_04s0023g02610.t01	Wine grape	golgi, mitochondrion, peroxisome	59.52	23.58
Os12t0636400-01	Rice	cytosol, peroxisome	57.14	22.22
TraesCS5D01G065000.1	Wheat	cytosol	56.35	21.78
HORVU5Hr1G012890.5	Barley	plastid	56.35	21.71
TraesCS6A01G029300.1	Wheat	cytosol	56.35	21.71
OQU79732	Sorghum	cytosol	53.97	21.05
Zm00001d041217_P002	Maize	extracellular	53.97	20.99
TraesCS5A01G053600.1	Wheat	cytosol	53.97	20.24
Zm00001d031204_P003	Maize	cytosol	53.17	19.65
HORVU6Hr1G005400.4	Barley	cytosol, peroxisome, plastid	55.56	19.28
EES17493	Sorghum	cytosol	49.21	19.02
Zm00001d031203_P001	Maize	cytosol	49.21	18.84
VIT_05s0077g02010.t01	Wine grape	cytosol	42.86	17.03
VIT_07s0005g00700.t01	Wine grape	cytosol	42.06	16.72
VIT_14s0060g01940.t01	Wine grape	cytosol	41.27	16.4
VIT_05s0077g01990.t01	Wine grape	cytoskeleton, cytosol, peroxisome	40.48	16.09
VIT_05s0077g02020.t01	Wine grape	cytosol	38.89	15.46
VIT_12s0059g00220.t01	Wine grape	peroxisome	28.57	11.5
VIT_00s0370g00070.t01	Wine grape	cytosol, peroxisome, plastid	27.78	11.29
VIT_00s0370g00060.t01	Wine grape	peroxisome, plasma membrane, plastid	27.78	11.25
VIT_12s0059g00210.t01	Wine grape	peroxisome	27.78	11.18
VIT_12s0059g00230.t01	Wine grape	cytosol, peroxisome, vacuole	26.98	10.86
VIT_03s0038g00100.t01	Wine grape	cytosol, mitochondrion, plastid, vacuole	2.38	2.61

Protein Annotations

ArrayExpress:VIT_03s0038g00090	EMBL:FN596508	EnsemblPlants:VIT_03s0038g00090.t01	EnsemblPlantsGene:VIT_03s0038g00090	Gene3D:3.40.50.1820	InterPro:AB_hydrolase
InterPro:IPR029058	PANTHER:PTHR43329	PANTHER:PTHR43329:SF5	ProteinID:CCB60725	ProteinID:CCB60725.1	SUPFAM:SSF53474
UniParc:UPI000210AA89	UniProt:F6I1A9	MapMan:35.2	:	:	:

Description

No Description!

Coordinates

chr3:-:69685..75662

Molecular Weight (calculated)

14287.1 Da

IEP (calculated)

4.884

GRAVY (calculated)

-0.133

Length

126 amino acids

Sequence
(BLAST)

001: MNQIIDFLNT PSELPPWIIE KELQFSASKF QQSGFTGALN YYRAMDMNWE LLGAWQGVKI TTPTKFIVGD EDVGFEAFGR GDYIKGKAFK GLVPNMEVVV
101: IGGHHHIQIE KAERVTSEIL SFFGEW

Best Arabidopsis Sequence Match ( AT3G51000.1 )
(BLAST)

001: MTSSVREKKI KTNGIWLNVA EKGDEEGPLV LLLHGFPETW YSWRHQIDFL SSHGYHVVAP DLRGYGDSDS LPSHESYTVS HLVADVIGLL DHYGTTQAFV
101: AGHDWGAIIG WCLCLFRPDR VKGFISLSVP YFPRDPKLKP SDFFKIFGDG LYITQFQKPG RAEAAFAKHD CLSVMKKFLL ITRTDYLVAP PDTEIIDHLE
201: IPSTIPDWIT EEEIQVYAEK FQRSGFTGPL NYYRSMDMNW EILAPWQDSK IVVPTKFIAG DKDIGYEGPN GTMEYVKGEV FKIVVPNLEI VVIEGGHHFI
301: QQEKSEQVSQ EILSFLNKLS KTE

Arabidopsis Description

AT3g51000/F24M12_40 [Source:UniProtKB/TrEMBL;Acc:Q9SD45]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.