Factsheet for HORVU5Hr1G012890.5

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
TargetP:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU3Hr1G035400.1
HORVU3Hr1G070810.3
HORVU3Hr1G070830.1
HORVU7Hr1G045620.2
HORVU7Hr1G045640.2

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G51000.1	HORVU3Hr1G035400.1	AT2G26740.1	21798944
AT3G51000.1	HORVU3Hr1G070810.3	AT2G26740.1	21798944
AT3G51000.1	HORVU3Hr1G070830.1	AT2G26740.1	21798944
AT3G51000.1	HORVU7Hr1G045620.2	AT2G26740.1	21798944
AT3G51000.1	HORVU7Hr1G045640.2	AT2G26740.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_03s0038g00090.t01	Wine grape	cytosol	21.71	56.35
Os12t0636400-01	Rice	cytosol, peroxisome	48.62	49.07
OQU79732	Sorghum	cytosol	48.32	48.92
HORVU6Hr1G005400.4	Barley	cytosol, peroxisome, plastid	53.82	48.48
Zm00001d041217_P002	Maize	extracellular	46.79	47.22
Zm00001d031204_P003	Maize	cytosol	48.93	46.92
EES17493	Sorghum	cytosol	44.95	45.09
Zm00001d031203_P001	Maize	cytosol	43.73	43.47
HORVU7Hr1G045620.2	Barley	cytosol, mitochondrion, peroxisome	18.04	38.31
HORVU3Hr1G070830.1	Barley	cytosol, peroxisome	19.88	37.36
VIT_15s0021g02470.t01	Wine grape	cytosol	35.47	36.59
VIT_04s0023g02610.t01	Wine grape	golgi, mitochondrion, peroxisome	35.47	36.48
KRH69845	Soybean	cytosol	35.78	35.78
CDY33304	Canola	peroxisome	35.17	35.49
CDY26530	Canola	peroxisome	34.86	35.19
KRH08141	Soybean	cytosol	35.17	35.17
AT3G51000.1	Thale cress	cytosol	34.56	34.98
Bra038876.1-P	Field mustard	peroxisome	34.56	34.56
Bra036841.1-P	Field mustard	peroxisome	32.42	33.23
CDX77971	Canola	cytosol, peroxisome, plastid	32.11	32.41
HORVU7Hr1G045640.2	Barley	plastid	28.13	26.14
HORVU7Hr1G042520.1	Barley	cytosol	11.62	24.2
HORVU3Hr1G035400.1	Barley	plastid	29.97	24.2
CDX90672	Canola	mitochondrion	33.33	22.85
HORVU5Hr1G115720.9	Barley	peroxisome	25.69	22.76
HORVU2Hr1G116250.4	Barley	peroxisome	20.18	22.76
HORVU1Hr1G044770.1	Barley	cytosol, peroxisome	21.71	22.76
HORVU1Hr1G044740.2	Barley	plastid	23.55	19.69
GSMUA_Achr5P19770_001	Banana	cytosol	5.2	16.35
CDY28994	Canola	mitochondrion	33.64	15.26
HORVU5Hr1G115780.1	Barley	peroxisome	14.98	15.12
HORVU7Hr1G075860.1	Barley	mitochondrion	3.06	13.89
HORVU2Hr1G116180.3	Barley	peroxisome	9.48	13.72
HORVU5Hr1G115800.1	Barley	peroxisome	10.7	13.36
CDX73754	Canola	cytosol, peroxisome, plastid	5.81	11.11
HORVU1Hr1G009090.4	Barley	peroxisome	5.5	7.63
HORVU3Hr1G070810.3	Barley	cytosol, peroxisome	2.14	6.8
CDX90673	Canola	cytosol	0.31	0.43

Protein Annotations

EnsemblPlants:HORVU5Hr1G012890.5	EnsemblPlantsGene:HORVU5Hr1G012890	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	InterPro:IPR029058	PANTHER:PTHR43329
PANTHER:PTHR43329:SF5	SEG:seg	SUPFAM:SSF53474	UniParc:UPI000B47C68A	UniProt:A0A287QEA0	MapMan:35.2

Description

No Description!

Coordinates

chrchr5H:+:39803864..39805652

Molecular Weight (calculated)

34942.7 Da

IEP (calculated)

9.831

GRAVY (calculated)

-0.546

Length

327 amino acids

Sequence
(BLAST)

001: AAQARCGTGA LKSTASPSTS PSRAPPPARR CSSSTASRSS GSPGATRWPL SPPAASAPSP PTSAATATPT PRQTPPPTPC STSSATSSRS STTSASPRCW
101: WRGTTGARRW RGTSACSGRT GCAPSSRWGS RSSPAPLVRW RICSPRAAMG STSRSSSPCL QEPGRAEKAF ARYDVATVLK KFYSIELDDL AAPPGVEIID
201: FFEASSSPLP WMSEEELGQY AEKFQKSGFT GPLNYYRNMD MNWRLTAPWH GAKITVPAKF IGGEKDIGVE SFGVKSYIKS GGFKSNVPDL EVSIIEGHHF
301: LQQEQAERVN SEILSFLDKF SGEEAHN

Best Arabidopsis Sequence Match ( AT3G51000.1 )
(BLAST)

001: MTSSVREKKI KTNGIWLNVA EKGDEEGPLV LLLHGFPETW YSWRHQIDFL SSHGYHVVAP DLRGYGDSDS LPSHESYTVS HLVADVIGLL DHYGTTQAFV
101: AGHDWGAIIG WCLCLFRPDR VKGFISLSVP YFPRDPKLKP SDFFKIFGDG LYITQFQKPG RAEAAFAKHD CLSVMKKFLL ITRTDYLVAP PDTEIIDHLE
201: IPSTIPDWIT EEEIQVYAEK FQRSGFTGPL NYYRSMDMNW EILAPWQDSK IVVPTKFIAG DKDIGYEGPN GTMEYVKGEV FKIVVPNLEI VVIEGGHHFI
301: QQEKSEQVSQ EILSFLNKLS KTE

Arabidopsis Description

AT3g51000/F24M12_40 [Source:UniProtKB/TrEMBL;Acc:Q9SD45]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.