CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, peroxisome, plastid

Predictor Summary:

nucleus 1
peroxisome 1
mitochondrion 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plastid
Any Predictor:	cytosol, nucleus, peroxisome, plastid
BaCelLo:	nucleus
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX77971	Canola	cytosol, peroxisome, plastid	89.47	47.22
CDX77051	Canola	cytosol	42.69	44.51
CDY33304	Canola	peroxisome	80.7	42.59
CDY26530	Canola	peroxisome	80.7	42.59
KRH69845	Soybean	cytosol	61.99	32.42
KRH08141	Soybean	cytosol	60.23	31.5
VIT_04s0023g02610.t01	Wine grape	golgi, mitochondrion, peroxisome	55.56	29.87
CDY05187	Canola	cytosol	50.88	25.59
Zm00001d031203_P001	Maize	cytosol	48.54	25.23
CDY65635	Canola	cytosol	46.2	25.08
CDY50394	Canola	peroxisome	46.2	25.0
EES17493	Sorghum	cytosol	47.37	24.85
TraesCS5D01G065000.1	Wheat	cytosol	47.37	24.85
OQU79732	Sorghum	cytosol	46.78	24.77
CDY65636	Canola	peroxisome	45.61	24.68
CDY27752	Canola	cytosol	48.54	24.41
Zm00001d041217_P002	Maize	extracellular	46.2	24.38
TraesCS6A01G029300.1	Wheat	cytosol	46.2	24.16
CDY48181	Canola	peroxisome	45.03	24.14
TraesCS5A01G053600.1	Wheat	cytosol	47.37	24.11
Os12t0636400-01	Rice	cytosol, peroxisome	45.61	24.07
CDX90672	Canola	mitochondrion	66.67	23.9
CDY09727	Canola	cytosol	44.44	23.24
CDX90553	Canola	cytosol	43.86	23.01
Zm00001d031204_P003	Maize	cytosol	45.61	22.87
CDY57860	Canola	cytosol	40.35	22.7
HORVU6Hr1G005400.4	Barley	cytosol, peroxisome, plastid	47.37	22.31
CDY09722	Canola	cytosol	41.52	21.58
CDX90550	Canola	cytosol	40.35	20.91
CDY28994	Canola	mitochondrion	66.67	15.81
CDY50393	Canola	cytosol	21.64	14.86
GSMUA_Achr5P19790_001	Banana	peroxisome	1.75	6.12
HORVU5Hr1G012890.5	Barley	plastid	11.11	5.81
CDX77049	Canola	peroxisome	1.75	1.83
CDX77050	Canola	peroxisome	1.75	1.83
CDX90673	Canola	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:CDX73754	EnsemblPlantsGene:GSBRNA2T00109368001	Gene3D:3.40.50.1820	GO:A0A078CC17	GO:GO:0003674	GO:GO:0003824
InterPro:AB_hydrolase	InterPro:AB_hydrolase_1	InterPro:Epox_hydrolase-like	InterPro:IPR029058	PANTHER:PTHR43689	PANTHER:PTHR43689:SF5
PFAM:PF00561	PRINTS:PR00412	ProteinID:CDX73754	ProteinID:CDX73754.1	SUPFAM:SSF53474	UniParc:UPI0004EC38F2
MapMan:35.2	:	:	:	:	:

Description

BnaC08g22490D

Coordinates

chrLK031799:+:2554073..2554804

Molecular Weight (calculated)

19380.0 Da

IEP (calculated)

8.256

GRAVY (calculated)

-0.225

Length

171 amino acids

Sequence
(BLAST)

001: MAREVREQRI KTNGIWLNVV EKGDNGGPLV LLLHGFPETW FSWRHQIDFL SSHGYHVVAP DLRGYADSDS PPSHESYTVS HLVADVIGLL DHYGTAQAFV
101: SGHDWGATIG WSLCLFRPDR VKGFISLSAP YFPRHPNLKP LEFFKSFGDG LYISQYHSFV RKYAVKFCGK P

Best Arabidopsis Sequence Match ( AT3G05600.1 )
(BLAST)

001: MEGIDHRMVS VNGITMHIAE KGPKEGPVVL LLHGFPDLWY TWRHQISGLS SLGYRAVAPD LRGYGDSDSP ESFSEYTCLN VVGDLVALLD SVAGNQEKVF
101: LVGHDWGAII GWFLCLFRPE KINGFVCLSV PYRSRNPKVK PVQGFKAVFG DDYYICRFQE PGKIEGEIAS ADPRIFLRNL FTGRTLGPPI LPKDNPFGEK
201: PNPNSENIEL PEWFSKKDLD FYVSKFEKAG FTGGLNYYRA MDLNWELTAP WTGAKIQVPV KFMTGDFDMV YTTPGMKEYI HGGGFAADVP TLQEIVVIED
301: AGHFVNQEKP QEVTAHINDF FTKLRDNNKS F

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9M9W5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.