Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, peroxisome, golgi
Predictor Summary:
Predictor Summary:
- cytosol 1
- peroxisome 1
- plastid 1
- mitochondrion 2
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH69845 | Soybean | cytosol | 70.44 | 68.5 |
| KRH08141 | Soybean | cytosol | 68.55 | 66.67 |
| VIT_15s0021g02470.t01 | Wine grape | cytosol | 64.15 | 64.35 |
| AT3G51000.1 | Thale cress | cytosol | 62.89 | 61.92 |
| CDY33304 | Canola | peroxisome | 62.26 | 61.11 |
| CDY26530 | Canola | peroxisome | 61.95 | 60.8 |
| Bra038876.1-P | Field mustard | peroxisome | 62.26 | 60.55 |
| VIT_03s0038g00090.t01 | Wine grape | cytosol | 23.58 | 59.52 |
| CDX77971 | Canola | cytosol, peroxisome, plastid | 60.38 | 59.26 |
| Bra036841.1-P | Field mustard | peroxisome | 59.43 | 59.25 |
| TraesCS5D01G065000.1 | Wheat | cytosol | 58.8 | 57.36 |
| TraesCS6A01G029300.1 | Wheat | cytosol | 57.55 | 55.96 |
| CDX73754 | Canola | cytosol, peroxisome, plastid | 29.87 | 55.56 |
| TraesCS5A01G053600.1 | Wheat | cytosol | 58.18 | 55.06 |
| Os12t0636400-01 | Rice | cytosol, peroxisome | 55.97 | 54.94 |
| OQU79732 | Sorghum | cytosol | 55.66 | 54.8 |
| VIT_03s0038g00100.t01 | Wine grape | cytosol, mitochondrion, plastid, vacuole | 19.81 | 54.78 |
| Zm00001d041217_P002 | Maize | extracellular | 55.35 | 54.32 |
| Zm00001d031203_P001 | Maize | cytosol | 54.4 | 52.58 |
| EES17493 | Sorghum | cytosol | 52.52 | 51.23 |
| Zm00001d031204_P003 | Maize | cytosol | 54.4 | 50.73 |
| HORVU6Hr1G005400.4 | Barley | cytosol, peroxisome, plastid | 57.86 | 50.69 |
| VIT_05s0077g02020.t01 | Wine grape | cytosol | 49.06 | 49.21 |
| VIT_07s0005g00700.t01 | Wine grape | cytosol | 48.11 | 48.27 |
| VIT_05s0077g01990.t01 | Wine grape | cytoskeleton, cytosol, peroxisome | 47.48 | 47.63 |
| VIT_05s0077g02010.t01 | Wine grape | cytosol | 46.86 | 47.0 |
| VIT_14s0060g01940.t01 | Wine grape | cytosol | 46.86 | 47.0 |
| VIT_05s0077g02030.t01 | Wine grape | mitochondrion | 13.21 | 44.68 |
| VIT_05s0077g02000.t01 | Wine grape | cytosol, mitochondrion, peroxisome | 25.16 | 41.88 |
| CDX90672 | Canola | mitochondrion | 57.55 | 38.36 |
| VIT_12s0059g00230.t01 | Wine grape | cytosol, peroxisome, vacuole | 37.74 | 38.34 |
| VIT_00s0370g00070.t01 | Wine grape | cytosol, peroxisome, plastid | 37.11 | 38.06 |
| VIT_00s0370g00060.t01 | Wine grape | peroxisome, plasma membrane, plastid | 37.11 | 37.94 |
| VIT_12s0059g00220.t01 | Wine grape | peroxisome | 36.16 | 36.74 |
| VIT_12s0059g00210.t01 | Wine grape | peroxisome | 35.85 | 36.42 |
| HORVU5Hr1G012890.5 | Barley | plastid | 36.48 | 35.47 |
| GSMUA_Achr5P19790_001 | Banana | peroxisome | 5.03 | 32.65 |
| CDY28994 | Canola | mitochondrion | 57.23 | 25.24 |
| CDX90673 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| EntrezGene:100255741 | wikigene:100255741 | Gene3D:3.40.50.1820 | MapMan:35.2 | InterPro:AB_hydrolase | InterPro:AB_hydrolase_1 |
| ProteinID:CBI17439 | ProteinID:CBI17439.3 | UniProt:D7SP60 | InterPro:Epox_hydrolase-like | EMBL:FN594959 | GO:GO:0003674 |
| GO:GO:0003824 | InterPro:IPR029058 | EntrezGene:LOC100255741 | wikigene:LOC100255741 | PFAM:PF00561 | PRINTS:PR00111 |
| PRINTS:PR00412 | PANTHER:PTHR43689 | PANTHER:PTHR43689:SF5 | SUPFAM:SSF53474 | UniParc:UPI00015CB891 | ArrayExpress:VIT_04s0023g02610 |
| EnsemblPlantsGene:VIT_04s0023g02610 | EnsemblPlants:VIT_04s0023g02610.t01 | unigene:Vvi.12759 | RefSeq:XP_002275140 | RefSeq:XP_002275140.2 | RefSeq:XP_010649095.1 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr4:-:19151076..19152443
Molecular Weight (calculated)
35997.2 Da
IEP (calculated)
6.079
GRAVY (calculated)
-0.117
Length
318 amino acids
Sequence
(BLAST)
(BLAST)
001: MSDQVRHQRI KINGIWMHIA EQGTGPLVLL LHGFPQFWYS WRHQMGCLAN KGYHVVAPDM RGYGDTDSPV SPTSYTVFHL VGDIIGLIDH FGEQKVVVVG
101: ADWGAVAAWH LSLFRPDRVK GLVCLCVPFK SRHPAKPTEF FTQTFGDGFY ITQFQEPGRA ERAFARYDYL AVMKKFLLIN KTDLLIAPPG MEIIDYLETP
201: SLLPTWITEE ELGVYADKFQ ESGFTGGLNY YRAMDLSWEL LAPWQGSKIT IPSKLIFGDK DIGFKDGGTK EYIEGNTFKT LVPDHEVVIL DGHHFIQEEK
301: PQQVSAEILS FLAKFSCD
101: ADWGAVAAWH LSLFRPDRVK GLVCLCVPFK SRHPAKPTEF FTQTFGDGFY ITQFQEPGRA ERAFARYDYL AVMKKFLLIN KTDLLIAPPG MEIIDYLETP
201: SLLPTWITEE ELGVYADKFQ ESGFTGGLNY YRAMDLSWEL LAPWQGSKIT IPSKLIFGDK DIGFKDGGTK EYIEGNTFKT LVPDHEVVIL DGHHFIQEEK
301: PQQVSAEILS FLAKFSCD
001: MTSSVREKKI KTNGIWLNVA EKGDEEGPLV LLLHGFPETW YSWRHQIDFL SSHGYHVVAP DLRGYGDSDS LPSHESYTVS HLVADVIGLL DHYGTTQAFV
101: AGHDWGAIIG WCLCLFRPDR VKGFISLSVP YFPRDPKLKP SDFFKIFGDG LYITQFQKPG RAEAAFAKHD CLSVMKKFLL ITRTDYLVAP PDTEIIDHLE
201: IPSTIPDWIT EEEIQVYAEK FQRSGFTGPL NYYRSMDMNW EILAPWQDSK IVVPTKFIAG DKDIGYEGPN GTMEYVKGEV FKIVVPNLEI VVIEGGHHFI
301: QQEKSEQVSQ EILSFLNKLS KTE
101: AGHDWGAIIG WCLCLFRPDR VKGFISLSVP YFPRDPKLKP SDFFKIFGDG LYITQFQKPG RAEAAFAKHD CLSVMKKFLL ITRTDYLVAP PDTEIIDHLE
201: IPSTIPDWIT EEEIQVYAEK FQRSGFTGPL NYYRSMDMNW EILAPWQDSK IVVPTKFIAG DKDIGYEGPN GTMEYVKGEV FKIVVPNLEI VVIEGGHHFI
301: QQEKSEQVSQ EILSFLNKLS KTE
Arabidopsis Description
AT3g51000/F24M12_40 [Source:UniProtKB/TrEMBL;Acc:Q9SD45]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.