Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- cytosol 2
- peroxisome 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G51000.1 | CDX77049 | AT2G26740.1 | 21798944 |
| AT3G51000.1 | CDX77050 | AT2G26740.1 | 21798944 |
| AT3G51000.1 | CDX77051 | AT2G26740.1 | 21798944 |
| AT3G51000.1 | CDY48181 | AT2G26740.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra038876.1-P | Field mustard | peroxisome | 99.07 | 98.17 |
| CDY26530 | Canola | peroxisome | 98.15 | 98.15 |
| AT3G51000.1 | Thale cress | cytosol | 85.8 | 86.07 |
| CDX77971 | Canola | cytosol, peroxisome, plastid | 83.95 | 83.95 |
| CDX73754 | Canola | cytosol, peroxisome, plastid | 42.59 | 80.7 |
| KRH69845 | Soybean | cytosol | 66.05 | 65.44 |
| KRH08141 | Soybean | cytosol | 65.12 | 64.53 |
| VIT_04s0023g02610.t01 | Wine grape | golgi, mitochondrion, peroxisome | 61.11 | 62.26 |
| Os12t0636400-01 | Rice | cytosol, peroxisome | 54.32 | 54.32 |
| TraesCS5D01G065000.1 | Wheat | cytosol | 54.32 | 53.99 |
| CDX90672 | Canola | mitochondrion | 78.7 | 53.46 |
| Zm00001d041217_P002 | Maize | extracellular | 53.4 | 53.4 |
| OQU79732 | Sorghum | cytosol | 53.09 | 53.25 |
| TraesCS5A01G053600.1 | Wheat | cytosol | 54.01 | 52.08 |
| TraesCS6A01G029300.1 | Wheat | cytosol | 52.47 | 51.99 |
| Zm00001d031203_P001 | Maize | cytosol | 51.85 | 51.06 |
| CDX77051 | Canola | cytosol | 25.62 | 50.61 |
| EES17493 | Sorghum | cytosol | 50.62 | 50.31 |
| Zm00001d031204_P003 | Maize | cytosol | 52.78 | 50.15 |
| CDY50394 | Canola | peroxisome | 47.22 | 48.42 |
| CDY65636 | Canola | peroxisome | 47.22 | 48.42 |
| CDY65635 | Canola | cytosol | 46.3 | 47.62 |
| HORVU6Hr1G005400.4 | Barley | cytosol, peroxisome, plastid | 52.78 | 47.11 |
| CDY05187 | Canola | cytosol | 48.46 | 46.18 |
| CDY27752 | Canola | cytosol | 47.53 | 45.29 |
| CDY48181 | Canola | peroxisome | 44.44 | 45.14 |
| CDY09722 | Canola | cytosol | 43.83 | 43.16 |
| CDY50393 | Canola | cytosol | 33.02 | 42.97 |
| CDX90550 | Canola | cytosol | 43.21 | 42.42 |
| CDX90553 | Canola | cytosol | 42.28 | 42.02 |
| CDY09727 | Canola | cytosol | 41.67 | 41.28 |
| CDY57860 | Canola | cytosol | 38.58 | 41.12 |
| CDX77049 | Canola | peroxisome | 19.14 | 37.8 |
| CDX77050 | Canola | peroxisome | 19.14 | 37.8 |
| CDY28994 | Canola | mitochondrion | 78.7 | 35.37 |
| HORVU5Hr1G012890.5 | Barley | plastid | 35.49 | 35.17 |
| GSMUA_Achr5P19790_001 | Banana | peroxisome | 4.32 | 28.57 |
| CDX90673 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| Gene3D:3.40.50.1820 | MapMan:35.2 | GO:A0A078H713 | UniProt:A0A078H713 | InterPro:AB_hydrolase | InterPro:AB_hydrolase_1 |
| EnsemblPlants:CDY33304 | ProteinID:CDY33304 | ProteinID:CDY33304.1 | InterPro:Epox_hydrolase-like | GO:GO:0003674 | GO:GO:0003824 |
| EnsemblPlantsGene:GSBRNA2T00054086001 | InterPro:IPR029058 | PFAM:PF00561 | PRINTS:PR00412 | PANTHER:PTHR43689 | PANTHER:PTHR43689:SF5 |
| SUPFAM:SSF53474 | UniParc:UPI0004EDF71F | : | : | : | : |
Description
BnaA01g19710DBnaA01g19710D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H713]
Coordinates
chrLK032310:+:286419..287861
Molecular Weight (calculated)
36698.5 Da
IEP (calculated)
5.097
GRAVY (calculated)
-0.273
Length
324 amino acids
Sequence
(BLAST)
(BLAST)
001: MTSEVREKKI KTNGIWLNVA DKGDEGEPLV LLLHGFPETW FSWRHQIDFL SSHGYHVVAP DLRGYADSDS PPTHESYTVS HLVADVIGLL DHYGTAQAFV
101: AGHDWGAIIG WSLCLFRPDR VKGFVSLSVP YSPRDPNLKP SDLFKSFGDG LYITQFQEPG RAEAAFAKHD CLTVMKKFLL TTRSDFWVAP PNTEIIDDLE
201: VPSTLPDWIT EEEIQVYADK FQKSGFTGPL NYYRAMDLNW EILAPWQGYK IVIPTKFIAG DKDIGNEGAN GTIKYVKGEM FKSIVPNLEV VVIEDGHHFI
301: QQEKSERVSQ EILSFFNKLR NITE
101: AGHDWGAIIG WSLCLFRPDR VKGFVSLSVP YSPRDPNLKP SDLFKSFGDG LYITQFQEPG RAEAAFAKHD CLTVMKKFLL TTRSDFWVAP PNTEIIDDLE
201: VPSTLPDWIT EEEIQVYADK FQKSGFTGPL NYYRAMDLNW EILAPWQGYK IVIPTKFIAG DKDIGNEGAN GTIKYVKGEM FKSIVPNLEV VVIEDGHHFI
301: QQEKSERVSQ EILSFFNKLR NITE
001: MTSSVREKKI KTNGIWLNVA EKGDEEGPLV LLLHGFPETW YSWRHQIDFL SSHGYHVVAP DLRGYGDSDS LPSHESYTVS HLVADVIGLL DHYGTTQAFV
101: AGHDWGAIIG WCLCLFRPDR VKGFISLSVP YFPRDPKLKP SDFFKIFGDG LYITQFQKPG RAEAAFAKHD CLSVMKKFLL ITRTDYLVAP PDTEIIDHLE
201: IPSTIPDWIT EEEIQVYAEK FQRSGFTGPL NYYRSMDMNW EILAPWQDSK IVVPTKFIAG DKDIGYEGPN GTMEYVKGEV FKIVVPNLEI VVIEGGHHFI
301: QQEKSEQVSQ EILSFLNKLS KTE
101: AGHDWGAIIG WCLCLFRPDR VKGFISLSVP YFPRDPKLKP SDFFKIFGDG LYITQFQKPG RAEAAFAKHD CLSVMKKFLL ITRTDYLVAP PDTEIIDHLE
201: IPSTIPDWIT EEEIQVYAEK FQRSGFTGPL NYYRSMDMNW EILAPWQDSK IVVPTKFIAG DKDIGYEGPN GTMEYVKGEV FKIVVPNLEI VVIEGGHHFI
301: QQEKSEQVSQ EILSFLNKLS KTE
Arabidopsis Description
AT3g51000/F24M12_40 [Source:UniProtKB/TrEMBL;Acc:Q9SD45]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.