CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
plastid 1
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome
BaCelLo:	cytosol
iPSORT:	plastid
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra036275.1-P	Field mustard	cytosol	99.68	99.68
CDY50393	Canola	cytosol	74.92	94.78
CDY50394	Canola	peroxisome	88.89	88.61
CDY65636	Canola	peroxisome	88.57	88.29
AT4G02340.1	Thale cress	peroxisome	87.3	84.88
KRG96457	Soybean	nucleus	68.89	68.45
VIT_07s0005g00700.t01	Wine grape	cytosol	64.76	64.35
Solyc09g075300.2.1	Tomato	cytosol	63.49	62.89
PGSC0003DMT400081311	Potato	cytosol	63.49	62.89
KRH68206	Soybean	peroxisome	57.14	59.6
CDX77051	Canola	cytosol	29.84	57.32
CDY05187	Canola	cytosol	59.37	55.0
CDX90553	Canola	cytosol	55.87	53.99
CDY27752	Canola	cytosol	57.78	53.53
CDY09727	Canola	cytosol	55.24	53.21
CDY09722	Canola	cytosol	55.24	52.89
CDY57860	Canola	cytosol	50.48	52.3
CDX90550	Canola	cytosol	54.6	52.12
Zm00001d012908_P001	Maize	peroxisome	16.83	51.96
CDY48181	Canola	peroxisome	52.38	51.72
CDY26530	Canola	peroxisome	47.62	46.3
CDY33304	Canola	peroxisome	47.62	46.3
CDX73754	Canola	cytosol, peroxisome, plastid	25.08	46.2
CDX77050	Canola	peroxisome	23.49	45.12
CDX77049	Canola	peroxisome	23.49	45.12
CDX77971	Canola	cytosol, peroxisome, plastid	44.44	43.21
Zm00001d012907_P001	Maize	peroxisome	21.59	41.72
CDX90672	Canola	mitochondrion	41.9	27.67
CDY28994	Canola	mitochondrion	42.22	18.45
CDX90673	Canola	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:CDY65635	EnsemblPlantsGene:GSBRNA2T00046952001	Gene3D:3.40.50.1820	GO:A0A078JGJ3	GO:GO:0003674	GO:GO:0003824
InterPro:AB_hydrolase	InterPro:AB_hydrolase_1	InterPro:Epox_hydrolase-like	InterPro:IPR029058	PANTHER:PTHR43329	PANTHER:PTHR43329:SF13
PFAM:PF00561	PRINTS:PR00111	PRINTS:PR00412	ProteinID:CDY65635	ProteinID:CDY65635.1	SEG:seg
SUPFAM:SSF53474	UniParc:UPI0004EE6DFF	UniProt:A0A078JGJ3	MapMan:35.2	:	:

Description

BnaAnng20800DBnaAnng20800D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JGJ3]

Coordinates

chrLK034869:-:5098..7592

Molecular Weight (calculated)

35851.8 Da

IEP (calculated)

6.139

GRAVY (calculated)

-0.201

Length

315 amino acids

Sequence
(BLAST)

001: MEKIEHTTVS TNGINMHVAS IGSGPVVLFL HGFPDLWYSW RHQLLSFADL GYRAIAPDLR GYGDSDSPPS HESYTLLHIV GDLVGLLDSL GVDQVFLVGH
101: DWGAIIAWWM CMIRPDRVKA LVNMSVEFHP RNPSVKTVDA YKALFGEDYY ICRFQEPGDI EEDFAQVDTK KLVNGFFTSH NTRPPCIPKS VFRYLPDPPA
201: LPGWFTEQDV CFYADKFSQK GFTGGLNYYR AMNLSWELTA PWDGLQIKVP VKYITGDLDP TYHIPGTKEY IHEGGLKKHV PFLQEVVVME GVGHFLQQEK
301: PKEITDHIYG FFKKF

Best Arabidopsis Sequence Match ( AT4G02340.1 )
(BLAST)

001: MEKIEHTTIS TNGINMHVAS IGSGPVILFV HGFPDLWYSW RHQLVSFAAL GYRAIAPDLR GYGDSDAPPS RESYTILHIV GDLVGLLDSL GVDRVFLVGH
101: DWGAIVAWWL CMIRPDRVNA LVNTSVVFNP RNPSVKPVDA FRALFGDDYY ICRFQEPGEI EEDFAQVDTK KLITRFFTSR NPRPPCIPKS VGFRGLPDPP
201: SLPAWLTEQD VRFYGDKFSQ KGFTGGLNYY RALNLSWELT APWTGLQIKV PVKFIVGDLD ITYNIPGTKE YIHEGGLKKH VPFLQEVVVM EGVGHFLHQE
301: KPDEVTDHIY GFFKKFRTRE TASL

Arabidopsis Description

AT4g02340 protein [Source:UniProtKB/TrEMBL;Acc:O81299]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.