Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- peroxisome 1
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400081311 | Potato | cytosol | 96.54 | 96.54 |
| Solyc06g009170.2.1 | Tomato | extracellular | 69.18 | 69.18 |
| CDY50394 | Canola | peroxisome | 63.84 | 64.24 |
| CDY65636 | Canola | peroxisome | 63.84 | 64.24 |
| Bra036276.1-P | Field mustard | cytosol | 63.52 | 63.92 |
| Bra036275.1-P | Field mustard | cytosol | 62.89 | 63.49 |
| CDY65635 | Canola | cytosol | 62.89 | 63.49 |
| AT4G02340.1 | Thale cress | peroxisome | 62.58 | 61.42 |
| Solyc01g099910.2.1 | Tomato | cytosol | 59.75 | 60.51 |
| CDY50393 | Canola | cytosol | 47.17 | 60.24 |
| GSMUA_Achr8P10290_001 | Banana | cytosol | 58.8 | 58.62 |
| GSMUA_Achr3P08130_001 | Banana | cytosol | 58.18 | 58.36 |
| Solyc05g054350.2.1 | Tomato | plastid | 58.8 | 58.26 |
| Solyc05g054320.2.1 | Tomato | cytosol | 58.8 | 58.26 |
| Solyc12g099430.1.1 | Tomato | cytosol | 57.55 | 56.66 |
| GSMUA_AchrUn_... | Banana | peroxisome | 55.66 | 55.84 |
| HORVU3Hr1G070810.3 | Barley | cytosol, peroxisome | 17.92 | 55.34 |
| Solyc01g066470.2.1 | Tomato | cytosol, peroxisome | 33.65 | 54.87 |
| Solyc01g066460.2.1 | Tomato | cytosol, peroxisome | 33.65 | 54.87 |
| TraesCS7D01G228900.1 | Wheat | cytosol | 53.14 | 54.87 |
| TraesCS7A01G222400.1 | Wheat | cytosol | 52.2 | 54.79 |
| Os01t0255000-01 | Rice | cytosol | 55.35 | 54.66 |
| TraesCS7D01G224000.1 | Wheat | unclear | 55.35 | 54.66 |
| TraesCS7A01G225600.1 | Wheat | cytosol | 55.35 | 54.66 |
| GSMUA_Achr8P22510_001 | Banana | peroxisome | 46.23 | 53.85 |
| TraesCS7B01G128800.1 | Wheat | cytosol | 54.4 | 53.73 |
| Os05t0273800-01 | Rice | cytosol, peroxisome, plastid | 55.35 | 53.17 |
| TraesCS7B01G128900.1 | Wheat | unclear | 53.77 | 53.11 |
| TraesCS7B01G194000.1 | Wheat | cytosol | 53.77 | 52.94 |
| TraesCS3D01G180600.1 | Wheat | peroxisome | 53.46 | 52.8 |
| TraesCS3B01G204900.1 | Wheat | peroxisome | 53.46 | 52.8 |
| EES00506 | Sorghum | cytosol | 53.46 | 52.31 |
| Solyc01g066450.2.1 | Tomato | cytosol | 55.03 | 52.24 |
| TraesCS3A01G175200.2 | Wheat | peroxisome | 52.52 | 51.86 |
| TraesCS7B01G129100.1 | Wheat | cytosol | 52.52 | 51.86 |
| Os01t0255100-01 | Rice | cytosol | 52.83 | 51.85 |
| HORVU3Hr1G070830.1 | Barley | cytosol, peroxisome | 27.36 | 50.0 |
| HORVU7Hr1G045620.2 | Barley | cytosol, mitochondrion, peroxisome | 23.9 | 49.35 |
| HORVU7Hr1G045640.2 | Barley | plastid | 54.09 | 48.86 |
| TraesCS7D01G224200.1 | Wheat | golgi, unclear | 53.14 | 48.15 |
| TraesCS7A01G222600.1 | Wheat | golgi, unclear | 52.52 | 47.44 |
| EES17023 | Sorghum | extracellular, plastid, vacuole | 53.14 | 45.19 |
| HORVU3Hr1G035400.1 | Barley | plastid | 53.77 | 42.22 |
| Solyc02g078570.2.1 | Tomato | extracellular | 34.91 | 35.24 |
| GSMUA_Achr3P24120_001 | Banana | cytosol | 60.06 | 30.13 |
Protein Annotations
| EnsemblPlants:Solyc09g075300.2.1 | EnsemblPlantsGene:Solyc09g075300.2 | Gene3D:3.40.50.1820 | GO:GO:0003674 | GO:GO:0003824 | InterPro:AB_hydrolase |
| InterPro:AB_hydrolase_1 | InterPro:Epox_hydrolase-like | InterPro:IPR029058 | PANTHER:PTHR43329 | PANTHER:PTHR43329:SF13 | PFAM:PF00561 |
| PRINTS:PR00111 | PRINTS:PR00412 | SEG:seg | SUPFAM:SSF53474 | UniParc:UPI000276B971 | UniProt:K4CVA7 |
| MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chr9:+:67029977..67033875
Molecular Weight (calculated)
36402.8 Da
IEP (calculated)
5.806
GRAVY (calculated)
-0.161
Length
318 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKIQHKTVS ANGIKMHVAE IGEGPAVLFL HGFPELWYSW RHQLLYFSNK GYRAIAPDLR GYGDTEIPSE ISSYTAFHIV GDLISLLDIL DLEKVFLIGH
101: DWGALIAWFF CLFRPDRIKA LVNLSCELRP RNPLRKPIDC LRELLGDDYY MCRFQKPGEV EEEFASIDTA KLIIGFLSSR DTRPPCIPKE IGFHQAFAQL
201: PAALPSWLTQ EDVNYYAEKL NKTGFTGGLN YYRNMDKNWE LTALFSGCKI QVPTKFVVGE LDLTYNIPGI KEYIHNGGFK KEVPSLEEVV VMEGAAHFIN
301: QEKPDEINAH IYDFIQKF
101: DWGALIAWFF CLFRPDRIKA LVNLSCELRP RNPLRKPIDC LRELLGDDYY MCRFQKPGEV EEEFASIDTA KLIIGFLSSR DTRPPCIPKE IGFHQAFAQL
201: PAALPSWLTQ EDVNYYAEKL NKTGFTGGLN YYRNMDKNWE LTALFSGCKI QVPTKFVVGE LDLTYNIPGI KEYIHNGGFK KEVPSLEEVV VMEGAAHFIN
301: QEKPDEINAH IYDFIQKF
001: MEKIEHTTIS TNGINMHVAS IGSGPVILFV HGFPDLWYSW RHQLVSFAAL GYRAIAPDLR GYGDSDAPPS RESYTILHIV GDLVGLLDSL GVDRVFLVGH
101: DWGAIVAWWL CMIRPDRVNA LVNTSVVFNP RNPSVKPVDA FRALFGDDYY ICRFQEPGEI EEDFAQVDTK KLITRFFTSR NPRPPCIPKS VGFRGLPDPP
201: SLPAWLTEQD VRFYGDKFSQ KGFTGGLNYY RALNLSWELT APWTGLQIKV PVKFIVGDLD ITYNIPGTKE YIHEGGLKKH VPFLQEVVVM EGVGHFLHQE
301: KPDEVTDHIY GFFKKFRTRE TASL
101: DWGAIVAWWL CMIRPDRVNA LVNTSVVFNP RNPSVKPVDA FRALFGDDYY ICRFQEPGEI EEDFAQVDTK KLITRFFTSR NPRPPCIPKS VGFRGLPDPP
201: SLPAWLTEQD VRFYGDKFSQ KGFTGGLNYY RALNLSWELT APWTGLQIKV PVKFIVGDLD ITYNIPGTKE YIHEGGLKKH VPFLQEVVVM EGVGHFLHQE
301: KPDEVTDHIY GFFKKFRTRE TASL
Arabidopsis Description
AT4g02340 protein [Source:UniProtKB/TrEMBL;Acc:O81299]
SUBAcon: [peroxisome]
SUBAcon: [peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.