Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- peroxisome 1
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc01g066460.2.1 | Tomato | cytosol, peroxisome | 92.31 | 92.31 |
| KRH50813 | Soybean | cytosol | 61.54 | 55.56 |
| PGSC0003DMT400029422 | Potato | cytosol | 91.79 | 55.08 |
| HORVU3Hr1G070810.3 | Barley | cytosol, peroxisome | 24.62 | 46.6 |
| Solyc12g099430.1.1 | Tomato | cytosol | 69.74 | 42.11 |
| Solyc05g054320.2.1 | Tomato | cytosol | 67.18 | 40.81 |
| Solyc05g054350.2.1 | Tomato | plastid | 64.62 | 39.25 |
| VIT_05s0077g01990.t01 | Wine grape | cytoskeleton, cytosol, peroxisome | 63.59 | 39.12 |
| Solyc01g066450.2.1 | Tomato | cytosol | 66.67 | 38.81 |
| VIT_05s0077g02010.t01 | Wine grape | cytosol | 60.0 | 36.91 |
| GSMUA_Achr3P08130_001 | Banana | cytosol | 59.49 | 36.59 |
| VIT_05s0077g02020.t01 | Wine grape | cytosol | 58.46 | 35.96 |
| KRH02278 | Soybean | cytosol | 64.1 | 35.31 |
| GSMUA_Achr8P10290_001 | Banana | cytosol | 57.44 | 35.11 |
| GSMUA_AchrUn_... | Banana | peroxisome | 56.92 | 35.02 |
| Solyc06g009170.2.1 | Tomato | extracellular | 56.92 | 34.91 |
| Solyc01g099910.2.1 | Tomato | cytosol | 55.9 | 34.71 |
| CDY09722 | Canola | cytosol | 58.46 | 34.65 |
| CDY09727 | Canola | cytosol | 57.44 | 34.25 |
| Bra012750.1-P | Field mustard | cytosol | 56.92 | 34.05 |
| CDX90553 | Canola | cytosol | 56.92 | 34.05 |
| Bra012747.1-P | Field mustard | cytosol | 57.44 | 33.94 |
| Solyc09g075300.2.1 | Tomato | cytosol | 54.87 | 33.65 |
| CDX90550 | Canola | cytosol | 56.92 | 33.64 |
| TraesCS7B01G129100.1 | Wheat | cytosol | 54.36 | 32.92 |
| Os05t0273800-01 | Rice | cytosol, peroxisome, plastid | 54.87 | 32.33 |
| TraesCS7D01G224000.1 | Wheat | unclear | 53.33 | 32.3 |
| TraesCS7B01G128800.1 | Wheat | cytosol | 53.33 | 32.3 |
| TraesCS7A01G225600.1 | Wheat | cytosol | 53.33 | 32.3 |
| TraesCS7B01G194000.1 | Wheat | cytosol | 52.82 | 31.89 |
| AT4G15955.3 | Thale cress | cytosol | 49.23 | 31.58 |
| EES00506 | Sorghum | cytosol | 52.31 | 31.38 |
| Os01t0255000-01 | Rice | cytosol | 51.79 | 31.37 |
| CDY57860 | Canola | cytosol | 48.21 | 30.92 |
| TraesCS7D01G228900.1 | Wheat | cytosol | 48.72 | 30.84 |
| HORVU7Hr1G045640.2 | Barley | plastid | 55.38 | 30.68 |
| TraesCS7B01G128900.1 | Wheat | unclear | 50.26 | 30.43 |
| TraesCS7D01G224200.1 | Wheat | golgi, unclear | 54.36 | 30.2 |
| TraesCS7A01G222600.1 | Wheat | golgi, unclear | 53.85 | 29.83 |
| GSMUA_Achr8P22510_001 | Banana | peroxisome | 41.54 | 29.67 |
| TraesCS3D01G180600.1 | Wheat | peroxisome | 48.72 | 29.5 |
| TraesCS7A01G222400.1 | Wheat | cytosol | 45.64 | 29.37 |
| TraesCS3A01G175200.2 | Wheat | peroxisome | 48.21 | 29.19 |
| TraesCS3B01G204900.1 | Wheat | peroxisome | 48.21 | 29.19 |
| AT4G15960.1 | Thale cress | mitochondrion | 55.9 | 29.07 |
| Os01t0255100-01 | Rice | cytosol | 47.18 | 28.4 |
| EES17023 | Sorghum | extracellular, plastid, vacuole | 51.79 | 27.01 |
| HORVU3Hr1G035400.1 | Barley | plastid | 50.26 | 24.2 |
| Solyc02g078570.2.1 | Tomato | extracellular | 37.44 | 23.17 |
| VIT_05s0077g02030.t01 | Wine grape | mitochondrion | 9.74 | 20.21 |
| VIT_05s0077g02000.t01 | Wine grape | cytosol, mitochondrion, peroxisome | 16.41 | 16.75 |
| GSMUA_Achr3P24120_001 | Banana | cytosol | 53.85 | 16.56 |
| HORVU3Hr1G070830.1 | Barley | cytosol, peroxisome | 10.77 | 12.07 |
| HORVU7Hr1G045620.2 | Barley | cytosol, mitochondrion, peroxisome | 6.15 | 7.79 |
Protein Annotations
| EnsemblPlants:Solyc01g066470.2.1 | EnsemblPlantsGene:Solyc01g066470.2 | Gene3D:3.40.50.1820 | GO:GO:0003674 | GO:GO:0003824 | InterPro:AB_hydrolase |
| InterPro:AB_hydrolase_1 | InterPro:Epox_hydrolase-like | InterPro:IPR029058 | PANTHER:PTHR43329 | PANTHER:PTHR43329:SF13 | PFAM:PF00561 |
| PRINTS:PR00111 | PRINTS:PR00412 | SUPFAM:SSF53474 | UniParc:UPI0002762B4D | UniProt:K4AWQ0 | MapMan:35.2 |
Description
No Description!
Coordinates
chr1:+:74482013..74482942
Molecular Weight (calculated)
22105.3 Da
IEP (calculated)
8.446
GRAVY (calculated)
-0.045
Length
195 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKVEHKTMR VNGINMHIAE MGQGPIVLFL HGFPELWYSW RHQMLFMAAH GYHVVAPDLR GFGDTTGAPK GDFTKFTTLH VVGDLVELLN IIAPDRKVFL
101: VGHDWGAMIA WALCLYRPDK INALVNMSVP YFPRNPIIRP IEALRAIYGD EYYIIKFQEP GKIEAEFAQI GTKTVLEKIL TMRDPDPLKM PKGKX
101: VGHDWGAMIA WALCLYRPDK INALVNMSVP YFPRNPIIRP IEALRAIYGD EYYIIKFQEP GKIEAEFAQI GTKTVLEKIL TMRDPDPLKM PKGKX
001: MEHRKVRGNG IDIHVAIQGP SDGPIVLLLH GFPELWYSWR HQIPGLAARG YRAVAPDLRG YGDSDAPAEI SSYTCFNIVG DLIAVISALT ASEDEKVFVV
101: GHDWGALIAW YLCLFRPDRV KALVNLSVPF SFRPTDPSVK PVDRMRAFYG DDYYICRFQE FGDVEAEIAE VGTERVMKRL LTYRTPGPVI IPKDKSFWGS
201: KGETIPLPSW LTEEDVAYFV SKFEEKGFSG PVNYYRNFNR NNELLGPWVG SKIQVPTKFV IGELDLVYYM PGVKEYIHGP QFKEDVPLLE EPVVMEGVAH
301: FINQEKPQEI LQIILDFISK F
101: GHDWGALIAW YLCLFRPDRV KALVNLSVPF SFRPTDPSVK PVDRMRAFYG DDYYICRFQE FGDVEAEIAE VGTERVMKRL LTYRTPGPVI IPKDKSFWGS
201: KGETIPLPSW LTEEDVAYFV SKFEEKGFSG PVNYYRNFNR NNELLGPWVG SKIQVPTKFV IGELDLVYYM PGVKEYIHGP QFKEDVPLLE EPVVMEGVAH
301: FINQEKPQEI LQIILDFISK F
Arabidopsis Description
ATSEHATsEH [Source:UniProtKB/TrEMBL;Acc:Q42566]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.